Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.03G008700 Manihot esculenta HOM05D006934 ORTHO05D008743 0.0e+00 1076.2 517 100.0
Potri.018G018700 Populus trichocarpa HOM05D006934 ORTHO05D008743 2.2e-240 835.5 506 78.3
Sabra18G0021400 Salix brachista HOM05D006934 ORTHO05D008743 8.5e-240 833.6 506 78.9
Cpa.g.sc127.37 Carica papaya HOM05D006934 ORTHO05D008743 4.2e-239 831.2 516 76.6
Dinv11656 Davidia involucrata HOM05D006934 ORTHO05D008743 7.9e-238 827.0 510 76.5
Rhsim02G0213000 Rhododendron simsii HOM05D006934 ORTHO05D008743 3.9e-237 824.7 509 76.2
GSVIVG01035967001 Vitis vinifera HOM05D006934 ORTHO05D008743 1.1e-236 823.2 511 76.1
Atru.chr7.2565 Acer truncatum HOM05D006934 ORTHO05D008743 4.4e-236 821.2 504 77.6
Hma1.2p1_0706F.1_g207020 Hydrangea macrophylla HOM05D006934 ORTHO05D008743 9.7e-236 820.1 509 75.0
Haze_21418 Corylus avellana HOM05D006934 ORTHO05D008743 1.4e-234 816.2 505 75.8
Prupe.1G393700 Prunus persica HOM05D006934 ORTHO05D008743 1.4e-234 816.2 497 76.7
Ciclev10008002m.g Citrus clementina HOM05D006934 ORTHO05D008743 3.1e-234 815.1 514 74.3
CSS0041678 Camellia sinensis var. sinensis HOM05D006934 ORTHO05D008743 9.1e-234 813.5 514 74.1
CSS0048576 Camellia sinensis var. sinensis HOM05D006934 ORTHO05D008743 9.1e-234 813.5 514 74.1
QL02p018881 Quercus lobata HOM05D006934 ORTHO05D008743 1.7e-232 809.3 510 74.7
Cfa013059 Carpinus fangiana HOM05D006934 ORTHO05D008743 8.5e-232 807.0 492 76.8
TWI34G0497 Tripterygium wilfordii HOM05D006934 ORTHO05D008743 3.2e-231 805.1 504 76.2
Lalb_Chr23g0268221 Lupinus albus HOM05D006934 ORTHO05D008743 4.2e-231 804.7 497 74.8
MD15G1040400 Malus domestica HOM05D006934 ORTHO05D008743 1.2e-230 803.1 501 75.0
Ca_15778_v3 Cicer arietinum L. HOM05D006934 ORTHO05D008743 2.1e-230 802.4 495 76.6
Cc08_g06990 Coffea canephora HOM05D006934 ORTHO05D008743 3.6e-230 801.6 485 75.5
Lj1g0027414 Lotus japonicus HOM05D006934 ORTHO05D008743 4.7e-230 801.2 500 75.8
Thecc.09G015800 Theobroma cacao HOM05D006934 ORTHO05D008743 3.0e-229 798.5 505 75.4
RcHm_v2.0_Chr6g0299421 Rosa chinensis HOM05D006934 ORTHO05D008743 8.8e-229 797.0 509 74.3
Duzib168G1051 Durio zibethinus HOM05D006934 ORTHO05D008743 1.5e-228 796.2 509 74.1
CANSAT25G0127 Cannabis sativa HOM05D006934 ORTHO05D008743 2.0e-228 795.8 509 73.5
FvH4_2g41120 Fragaria vesca HOM05D006934 ORTHO05D008743 2.0e-228 795.8 491 76.6
Psat5g033000 Pisum sativum HOM05D006934 ORTHO05D008743 2.0e-228 795.8 502 74.5
TPR.G1832 Trifolium pratense HOM05D006934 ORTHO05D008743 7.5e-228 793.9 503 75.0
TAR626G1595 Trochodendron aralioides HOM05D006934 ORTHO05D008743 9.7e-228 793.5 511 72.4
Eucgr.C02612 Eucalyptus grandis HOM05D006934 ORTHO05D008743 1.3e-227 793.1 506 74.9
ECA236G4849 Erigeron canadensis HOM05D006934 ORTHO05D008743 1.7e-227 792.7 485 75.5
HanXRQChr06g0176741 Helianthus annuus HOM05D006934 ORTHO05D008743 2.2e-227 792.3 508 71.9
Medtr3g105980 Medicago truncatula HOM05D006934 ORTHO05D008743 2.2e-227 792.3 497 76.5
Sopen08g022340 Solanum pennellii HOM05D006934 ORTHO05D008743 2.2e-227 792.3 489 75.9
Phvul.009G087000 Phaseolus vulgaris HOM05D006934 ORTHO05D008743 1.8e-226 789.3 497 73.6
Nitab4.5_0006202g0030 Nicotiana tabacum HOM05D006934 ORTHO05D008743 4.1e-226 788.1 511 73.6
PGR044G1250 Punica granatum HOM05D006934 ORTHO05D008743 9.1e-226 786.9 507 74.8
FAN27G3133 Fragaria x ananassa HOM05D006934 ORTHO05D008743 2.7e-225 785.4 492 75.8
Actinidia10522 Actinidia chinensis HOM05D006934 ORTHO05D008743 3.5e-225 785.0 516 72.7
CAN.G21.49 Capsicum annuum HOM05D006934 ORTHO05D008743 5.9e-225 784.3 509 73.7
Solyc08g068580.4 Solanum lycopersicum HOM05D006934 ORTHO05D008743 7.7e-225 783.9 489 75.1
Migut.A00351 Erythranthe guttata HOM05D006934 ORTHO05D008743 1.3e-224 783.1 479 75.4
MBI15_g19327_MAGBIO Magnolia biondii HOM05D006934 ORTHO05D008743 2.9e-224 781.9 505 72.3
AUR62032410 Chenopodium quinoa HOM05D006934 ORTHO05D008743 1.1e-223 780.0 505 72.1
Lsat_1_v5_gn_8_82201 Lactuca sativa HOM05D006934 ORTHO05D008743 1.9e-223 779.2 511 71.6
AUR62024810 Chenopodium quinoa HOM05D006934 ORTHO05D008743 2.5e-223 778.9 505 72.1
COL.COLO4_18949 Corchorus olitorius HOM05D006934 ORTHO05D008743 1.6e-222 776.2 506 72.5
arahy.Tifrunner.gnm1.ann1.XZ9AUI Arachis hypogaea HOM05D006934 ORTHO05D008743 4.7e-222 774.6 520 69.8
vmacro11241 Vaccinium macrocarpon HOM05D006934 ORTHO05D008743 6.1e-222 774.2 547 68.4
Eucgr.C02525 Eucalyptus grandis HOM05D006934 ORTHO05D008743 1.0e-221 773.5 505 73.5
Aqoxy5G03587 Aquilegia oxysepala HOM05D006934 ORTHO05D008743 1.4e-221 773.1 511 70.6
Gorai.001G038100 Gossypium raimondii HOM05D006934 ORTHO05D008743 1.4e-221 773.1 485 74.0
ATR0739G024 Amborella trichopoda HOM05D006934 ORTHO05D008743 2.3e-221 772.3 496 73.0
VMungo1309G2247 Vigna mungo HOM05D006934 ORTHO05D008743 2.3e-221 772.3 487 74.1
MSTRG.25834 Avicennia marina HOM05D006934 ORTHO05D008743 4.0e-221 771.5 488 73.2
Eucgr.C02611 Eucalyptus grandis HOM05D006934 ORTHO05D008743 4.0e-221 771.5 505 73.3
Glyma.06G061500 Glycine max HOM05D006934 ORTHO05D008743 2.0e-220 769.2 501 71.7
Gohir.D07G036200 Gossypium hirsutum HOM05D006934 ORTHO05D008743 2.0e-220 769.2 485 73.8
Glyma.04G060900 Glycine max HOM05D006934 ORTHO05D008743 4.4e-220 768.1 501 72.1
EL10Ac2g02505 Beta vulgaris HOM05D006934 ORTHO05D008743 4.8e-219 764.6 512 70.9
Lj7C734G21 Lonicera japonica HOM05D006934 ORTHO05D008743 3.1e-218 761.9 455 77.4
Gorai.010G118800 Gossypium raimondii HOM05D006934 ORTHO05D008743 5.4e-218 761.1 517 69.6
PGSC0003DMG400029048 Solanum tuberosum HOM05D006934 ORTHO05D008743 1.7e-216 756.1 472 74.8
Gohir.D06G103800 Gossypium hirsutum HOM05D006934 ORTHO05D008743 2.9e-216 755.4 517 69.2
Eucgr.C02526 Eucalyptus grandis HOM05D006934 ORTHO05D008743 3.8e-216 755.0 477 74.8
Sed0006653 Sechium edule HOM05D006934 ORTHO05D008743 1.5e-215 753.1 509 69.5
CiPaw.07G230200 Carya illinoinensis HOM05D006934 ORTHO05D008743 1.9e-215 752.7 471 75.4
Hund02990 Selenicereus undatus HOM05D006934 ORTHO05D008743 6.1e-214 747.7 502 71.1
CDE02G1998 Ceratophyllum demersum HOM05D006934 ORTHO05D008743 6.8e-213 744.2 494 69.2
PSO017G3817 Papaver somniferum HOM05D006934 ORTHO05D008743 1.5e-212 743.0 500 69.4
Sp2g22420 Schrenkiella parvula HOM05D006934 ORTHO05D008743 1.7e-211 739.6 500 70.2
BcaNung03200 Brassica carinata HOM05D006934 ORTHO05D008743 3.7e-211 738.4 505 70.1
MELO3C016958.2 Cucumis melo HOM05D006934 ORTHO05D008743 1.8e-210 736.1 515 68.3
CsaV3_4G036540 Cucumis sativus L. HOM05D006934 ORTHO05D008743 5.4e-210 734.6 510 68.4
PSO170G6733 Papaver somniferum HOM05D006934 ORTHO05D008743 7.0e-210 734.2 500 68.8
C07p42720 Brassica napus HOM05D006934 ORTHO05D008743 3.5e-209 731.9 483 71.0
Nitab4.5_0000406g0060 Nicotiana tabacum HOM05D006934 ORTHO05D008743 3.5e-209 731.9 486 71.2
HPP92_004696 Vanilla planifolia HOM05D006934 ORTHO05D008743 3.5e-209 731.9 479 70.8
BraA06t26511Z Brassica rapa HOM05D006934 ORTHO05D008743 1.3e-208 729.9 483 71.2
Ah.12g060980 Amaranthus hybridus HOM05D006934 ORTHO05D008743 2.9e-208 728.8 460 75.0
Os06g0649900 Oryza sativa ssp. japonica HOM05D006934 ORTHO05D008743 2.9e-208 728.8 477 69.4
BcaNung02296 Brassica carinata HOM05D006934 ORTHO05D008743 5.0e-208 728.0 483 70.6
BolC7t44802H Brassica oleracea HOM05D006934 ORTHO05D008743 5.0e-208 728.0 483 70.6
unitig_32.g11664 Utricularia gibba HOM05D006934 ORTHO05D008743 1.6e-206 723.0 481 70.1
THA.LOC104799020 Tarenaya hassleriana HOM05D006934 ORTHO05D008743 2.8e-206 722.2 503 69.0
Aa31LG11G4330 Aethionema arabicum HOM05D006934 ORTHO05D008743 6.1e-206 721.1 497 70.0
AL6G36750 Arabidopsis lyrata HOM05D006934 ORTHO05D008743 1.8e-205 719.5 495 68.9
ClCG05G016280 Citrullus lanatus HOM05D006934 ORTHO05D008743 1.5e-204 716.5 514 67.1
A06p35860 Brassica napus HOM05D006934 ORTHO05D008743 3.0e-200 702.2 530 65.1
SEGI_09290 Sequoiadendron giganteum HOM05D006934 ORTHO05D008743 1.5e-199 699.9 494 65.8
Aqoxy2G03820 Aquilegia oxysepala HOM05D006934 ORTHO05D008743 4.0e-197 691.8 508 64.4
Nn2g12390 Nelumbo nucifera HOM05D006934 ORTHO05D008743 2.6e-196 689.1 507 67.3
BcaNung06716 Brassica carinata HOM05D006934 ORTHO05D008743 7.0e-194 681.0 483 67.9
arahy.Tifrunner.gnm1.ann1.G1SIKM Arachis hypogaea HOM05D006934 ORTHO05D008743 4.6e-185 651.7 520 61.9
Pp3c3_35450 Physcomitrium patens HOM05D006934 ORTHO05D008743 1.3e-171 607.1 477 59.5
Thhalv10004366m.g Eutrema salsugineum HOM05D006934 ORTHO05D008743 6.6e-168 594.7 379 73.6
CARHR188390 Cardamine hirsuta HOM05D006934 ORTHO05D008743 1.4e-157 560.5 371 72.2
Peaxi162Scf00822g00212 Petunia axillaris HOM05D006934 ORTHO05D008743 3.7e-150 535.8 357 70.0
Sc09g0010640 Simmondsia chinensis HOM05D006934 ORTHO05D008743 5.3e-149 531.9 340 72.6
Nn8g39897 Nelumbo nucifera HOM05D006934 ORTHO05D008743 1.1e-135 487.6 363 63.1
Eucgr.C02635 Eucalyptus grandis HOM05D006934 ORTHO05D008743 7.7e-124 448.4 497 49.5
Gohir.A06G101800 Gossypium hirsutum HOM05D006934 ORTHO05D008743 2.5e-122 443.4 320 65.0
Gohir.A07G032950 Gossypium hirsutum HOM05D006934 ORTHO05D008743 2.7e-121 439.9 279 70.6
Zm00001eb275030 Zea mays HOM05D006934 ORTHO05D008743 5.7e-95 352.4 247 61.9
Zm00001eb334470 Zea mays HOM05D006934 ORTHO05D008743 4.9e-86 322.8 214 63.6
QL02p018870 Quercus lobata HOM05D006934 ORTHO05D008743 9.2e-77 292.0 183 72.1
Gohir.A06G101702 Gossypium hirsutum HOM05D006934 ORTHO05D008743 1.6e-73 281.2 178 75.8
Zm00001eb337170 Zea mays HOM05D006934 ORTHO05D008743 8.7e-59 232.3 147 67.3
SGA_v2.0_scaffold22G09909 Striga asiatica HOM05D006934 ORTHO05D008743 1.9e-58 231.1 149 74.5
Lsat_1_v5_gn_5_171641 Lactuca sativa HOM05D006934 ORTHO05D008743 1.3e-22 112.1 104 56.7
Cfa012861 Carpinus fangiana HOM05D006934 ORTHO05D008743 2.6e-15 87.8 52 69.2
SEGI_28803 Sequoiadendron giganteum HOM05D006934 ORTHO05D008743 8.5e-14 82.8 83 48.2
Lsat_1_v5_gn_2_108800 Lactuca sativa HOM05D006934 ORTHO05D003550 3.9e-11 73.9 78 48.7
Oeu030220.2 Olea europaea HOM05D006934 ORTHO05D008743 1.3e-06 58.9 33 75.8


User provided reference genes

Program Settings