Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.02G225801 Manihot esculenta HOM05D003525 ORTHO05D025801 1.2e-71 273.1 140 100.0
Manes.08G077055 Manihot esculenta HOM05D003525 ORTHO05D025801 3.1e-67 258.5 140 94.3
Manes.17G100700 Manihot esculenta HOM05D003525 ORTHO05D004578 1.7e-46 189.5 161 67.7
MELO3C020978.2 Cucumis melo HOM05D003525 ORTHO05D004578 5.3e-35 151.4 161 59.0
CsaV3_2G014670 Cucumis sativus L. HOM05D003525 ORTHO05D004578 1.5e-34 149.8 161 58.4
ClCG11G004450 Citrullus lanatus HOM05D003525 ORTHO05D004578 9.9e-34 147.1 161 57.8
Sed0023087 Sechium edule HOM05D003525 ORTHO05D004578 9.9e-34 147.1 161 57.1
Manes.15G163700 Manihot esculenta HOM05D003525 ORTHO05D004578 1.7e-33 146.4 167 52.1
CiPaw.05G064000 Carya illinoinensis HOM05D003525 ORTHO05D004578 2.2e-33 146.0 161 57.1
CiPaw.06G135700 Carya illinoinensis HOM05D003525 ORTHO05D004578 4.9e-33 144.8 161 57.1
Cfa005008 Carpinus fangiana HOM05D003525 ORTHO05D004578 2.4e-32 142.5 161 55.3
Actinidia17817 Actinidia chinensis HOM05D003525 ORTHO05D004578 3.2e-32 142.1 164 56.7
Haze_02380 Corylus avellana HOM05D003525 ORTHO05D004578 3.2e-32 142.1 161 54.0
Lj9A369G67 Lonicera japonica HOM05D003525 ORTHO05D004578 4.2e-32 141.7 162 56.2
Sed0019550 Sechium edule HOM05D003525 ORTHO05D004578 4.2e-32 141.7 161 55.3
CANSAT01G0222 Cannabis sativa HOM05D003525 ORTHO05D004578 1.2e-31 140.2 161 54.7
MD10G1076900 Malus domestica HOM05D003525 ORTHO05D004578 3.5e-31 138.7 162 53.7
QL11p043469 Quercus lobata HOM05D003525 ORTHO05D004578 3.5e-31 138.7 163 57.1
MD05G1067200 Malus domestica HOM05D003525 ORTHO05D004578 6.0e-31 137.9 162 53.1
Dinv23526 Davidia involucrata HOM05D003525 ORTHO05D004578 1.0e-30 137.1 162 54.9
Duzib248G1434 Durio zibethinus HOM05D003525 ORTHO05D004578 1.0e-30 137.1 161 54.7
Lj1g0027431 Lotus japonicus HOM05D003525 ORTHO05D004578 1.0e-30 137.1 161 55.9
CSS0028225 Camellia sinensis var. sinensis HOM05D003525 ORTHO05D004578 1.3e-30 136.7 162 54.9
Atru.chr5.3008 Acer truncatum HOM05D003525 ORTHO05D004578 1.8e-30 136.3 161 51.6
Aqoxy5G01649 Aquilegia oxysepala HOM05D003525 ORTHO05D004578 1.8e-30 136.3 164 53.0
Peaxi162Scf00003g01338 Petunia axillaris HOM05D003525 ORTHO05D004578 1.8e-30 136.3 161 52.2
Rhsim05G0074500 Rhododendron simsii HOM05D003525 ORTHO05D004578 1.8e-30 136.3 164 53.0
Ciclev10028340m.g Citrus clementina HOM05D003525 ORTHO05D004578 2.3e-30 136.0 162 52.5
vmacro17495 Vaccinium macrocarpon HOM05D003525 ORTHO05D004578 2.3e-30 136.0 161 53.4
Sabra09G0088700 Salix brachista HOM05D003525 ORTHO05D004578 3.9e-30 135.2 162 54.3
TWI31G1364 Tripterygium wilfordii HOM05D003525 ORTHO05D004578 3.9e-30 135.2 161 54.7
Duzib052G0238 Durio zibethinus HOM05D003525 ORTHO05D004578 5.1e-30 134.8 161 53.4
Nitab4.5_0001361g0240 Nicotiana tabacum HOM05D003525 ORTHO05D004578 5.1e-30 134.8 162 53.7
RcHm_v2.0_Chr6g0264151 Rosa chinensis HOM05D003525 ORTHO05D004578 6.7e-30 134.4 161 51.6
arahy.Tifrunner.gnm1.ann1.92AS0N Arachis hypogaea HOM05D003525 ORTHO05D004578 8.7e-30 134.0 163 54.0
arahy.Tifrunner.gnm1.ann1.WSY56D Arachis hypogaea HOM05D003525 ORTHO05D004578 8.7e-30 134.0 163 54.0
Actinidia00521 Actinidia chinensis HOM05D003525 ORTHO05D004578 1.1e-29 133.7 162 52.5
Cc02_g17610 Coffea canephora HOM05D003525 ORTHO05D004578 1.1e-29 133.7 161 52.2
Nn5g29579 Nelumbo nucifera HOM05D003525 ORTHO05D004578 1.5e-29 133.3 161 51.6
Actinidia27897 Actinidia chinensis HOM05D003525 ORTHO05D004578 1.9e-29 132.9 163 54.0
Dinv42068 Davidia involucrata HOM05D003525 ORTHO05D004578 1.9e-29 132.9 161 54.7
Nitab4.5_0005152g0050 Nicotiana tabacum HOM05D003525 ORTHO05D004578 1.9e-29 132.9 162 53.1
PSO210G1867 Papaver somniferum HOM05D003525 ORTHO05D004578 1.9e-29 132.9 162 50.6
Potri.009G115500 Populus trichocarpa HOM05D003525 ORTHO05D004578 1.9e-29 132.9 162 54.3
Prupe.8G097900 Prunus persica HOM05D003525 ORTHO05D004578 1.9e-29 132.9 161 52.8
Sopen10g023030 Solanum pennellii HOM05D003525 ORTHO05D004578 2.5e-29 132.5 162 53.1
TWI79G1197 Tripterygium wilfordii HOM05D003525 ORTHO05D004578 2.5e-29 132.5 161 53.4
Gohir.A13G034600 Gossypium hirsutum HOM05D003525 ORTHO05D004578 3.3e-29 132.1 162 52.5
TAR381G1436 Trochodendron aralioides HOM05D003525 ORTHO05D004578 3.3e-29 132.1 161 51.6
TAR628G1296 Trochodendron aralioides HOM05D003525 ORTHO05D004578 3.3e-29 132.1 161 50.9
FAN20G1110 Fragaria x ananassa HOM05D003525 ORTHO05D004578 4.3e-29 131.7 161 49.7
PSO731G0006 Papaver somniferum HOM05D003525 ORTHO05D004578 4.3e-29 131.7 162 51.2
Duzib132G0954 Durio zibethinus HOM05D003525 ORTHO05D004578 5.6e-29 131.3 160 52.5
TAR376G0071 Trochodendron aralioides HOM05D003525 ORTHO05D004578 5.6e-29 131.3 161 52.8
Nitab4.5_0000308g0040 Nicotiana tabacum HOM05D003525 ORTHO05D004578 7.4e-29 131.0 159 49.7
PGSC0003DMG400033911 Solanum tuberosum HOM05D003525 ORTHO05D004578 9.6e-29 130.6 161 51.6
Gohir.D13G033000 Gossypium hirsutum HOM05D003525 ORTHO05D004578 1.6e-28 129.8 162 52.5
Gorai.013G037400 Gossypium raimondii HOM05D003525 ORTHO05D004578 1.6e-28 129.8 162 52.5
Nn1g05019 Nelumbo nucifera HOM05D003525 ORTHO05D004578 1.6e-28 129.8 160 51.2
Sabra04G0102300 Salix brachista HOM05D003525 ORTHO05D004578 1.6e-28 129.8 169 50.3
Solyc10g051340.2 Solanum lycopersicum HOM05D003525 ORTHO05D004578 2.8e-28 129.0 162 53.7
FvH4_2g08710 Fragaria vesca HOM05D003525 ORTHO05D004578 3.6e-28 128.6 161 49.7
Aa31LG8G13620 Aethionema arabicum HOM05D003525 ORTHO05D004578 4.8e-28 128.3 166 50.6
AUR62011328 Chenopodium quinoa HOM05D003525 ORTHO05D004578 4.8e-28 128.3 161 46.6
Ca_20867_v3 Cicer arietinum L. HOM05D003525 ORTHO05D004578 4.8e-28 128.3 162 53.1
Lalb_Chr23g0265401 Lupinus albus HOM05D003525 ORTHO05D004578 4.8e-28 128.3 161 53.4
FAN24G2203 Fragaria x ananassa HOM05D003525 ORTHO05D004578 6.2e-28 127.9 161 49.7
GSVIVG01031961001 Vitis vinifera HOM05D003525 ORTHO05D004578 6.2e-28 127.9 161 50.9
Glyma.11G118300 Glycine max HOM05D003525 ORTHO05D004578 8.1e-28 127.5 162 51.2
Glyma.12G043700 Glycine max HOM05D003525 ORTHO05D004578 1.1e-27 127.1 162 51.2
Lalb_Chr08g0246641 Lupinus albus HOM05D003525 ORTHO05D004578 1.1e-27 127.1 164 52.4
Potri.004G153900 Populus trichocarpa HOM05D003525 ORTHO05D004578 1.1e-27 127.1 168 48.8
Hund06230 Selenicereus undatus HOM05D003525 ORTHO05D004578 1.1e-27 127.1 166 50.0
MSTRG.20085 Avicennia marina HOM05D003525 ORTHO05D004578 1.4e-27 126.7 162 49.4
Peaxi162Scf00016g00826 Petunia axillaris HOM05D003525 ORTHO05D004578 1.4e-27 126.7 162 47.5
SalBow6G0296 Salvia bowleyana HOM05D003525 ORTHO05D004578 1.4e-27 126.7 162 50.0
SalBow6G6569 Salvia bowleyana HOM05D003525 ORTHO05D004578 1.4e-27 126.7 162 50.0
Oeu020764.1 Olea europaea HOM05D003525 ORTHO05D004578 1.8e-27 126.3 162 48.8
AUR62016732 Chenopodium quinoa HOM05D003525 ORTHO05D004578 2.4e-27 125.9 161 47.8
FAN15G1113 Fragaria x ananassa HOM05D003525 ORTHO05D004578 2.4e-27 125.9 161 48.4
Thecc.02G086000 Theobroma cacao HOM05D003525 ORTHO05D004578 2.4e-27 125.9 161 49.7
Gohir.D02G215300 Gossypium hirsutum HOM05D003525 ORTHO05D004578 3.1e-27 125.6 162 48.1
Gorai.005G243200 Gossypium raimondii HOM05D003525 ORTHO05D004578 3.1e-27 125.6 162 48.1
Lj5A197T61 Lonicera japonica HOM05D003525 ORTHO05D004578 3.1e-27 125.6 161 47.2
Psat7g184520 Pisum sativum HOM05D003525 ORTHO05D004578 3.1e-27 125.6 162 52.5
Gohir.A03G194200 Gossypium hirsutum HOM05D003525 ORTHO05D004578 4.0e-27 125.2 162 48.1
CSS0001193 Camellia sinensis var. sinensis HOM05D003525 ORTHO05D004578 5.3e-27 124.8 161 50.9
FAN27G1229 Fragaria x ananassa HOM05D003525 ORTHO05D004578 6.9e-27 124.4 161 48.4
Nitab4.5_0004172g0090 Nicotiana tabacum HOM05D003525 ORTHO05D004578 6.9e-27 124.4 106 60.4
HanXRQChr13g0410301 Helianthus annuus HOM05D003525 ORTHO05D004578 9.0e-27 124.0 161 50.3
PSO541G1852 Papaver somniferum HOM05D003525 ORTHO05D004578 1.2e-26 123.6 162 48.8
CsaV3_7G023520 Cucumis sativus L. HOM05D003525 ORTHO05D004578 1.5e-26 123.2 167 44.9
DCAR_022933 Daucus carota HOM05D003525 ORTHO05D004578 2.0e-26 122.9 161 47.2
MELO3C012526.2 Cucumis melo HOM05D003525 ORTHO05D004578 2.6e-26 122.5 161 46.6
DCAR_028988 Daucus carota HOM05D003525 ORTHO05D004578 2.6e-26 122.5 161 47.2
Migut.N01237 Erythranthe guttata HOM05D003525 ORTHO05D004578 2.6e-26 122.5 161 47.8
PSO675G1462 Papaver somniferum HOM05D003525 ORTHO05D004578 2.6e-26 122.5 162 48.1
SGA_v2.0_scaffold58G20536 Striga asiatica HOM05D003525 ORTHO05D004578 2.6e-26 122.5 161 50.3
ClCG02G005050 Citrullus lanatus HOM05D003525 ORTHO05D004578 4.5e-26 121.7 161 47.2
BcaC01g00903 Brassica carinata HOM05D003525 ORTHO05D004578 5.8e-26 121.3 167 47.9
Migut.B00240 Erythranthe guttata HOM05D003525 ORTHO05D004578 7.6e-26 120.9 162 50.0
Lsat_1_v5_gn_5_118620 Lactuca sativa HOM05D003525 ORTHO05D004578 9.9e-26 120.6 161 49.7
Sopen01g051770 Solanum pennellii HOM05D003525 ORTHO05D004578 9.9e-26 120.6 163 47.9
COL.COLO4_25923 Corchorus olitorius HOM05D003525 ORTHO05D004578 1.3e-25 120.2 161 47.2
ECA236G3498 Erigeron canadensis HOM05D003525 ORTHO05D004578 1.7e-25 119.8 166 46.4
Solyc01g109580.4 Solanum lycopersicum HOM05D003525 ORTHO05D004578 1.7e-25 119.8 163 47.9
Aa31LG2G16030 Aethionema arabicum HOM05D003525 ORTHO05D004578 2.2e-25 119.4 165 47.9
THA.LOC104807320 Tarenaya hassleriana HOM05D003525 ORTHO05D004578 2.2e-25 119.4 164 45.7
THA.LOC104819606 Tarenaya hassleriana HOM05D003525 ORTHO05D004578 2.2e-25 119.4 166 49.4
Phvul.011G045700 Phaseolus vulgaris HOM05D003525 ORTHO05D004578 2.9e-25 119.0 162 48.1
Ah.01g019420 Amaranthus hybridus HOM05D003525 ORTHO05D004578 3.8e-25 118.6 161 44.7
BcaNung06262 Brassica carinata HOM05D003525 ORTHO05D004578 3.8e-25 118.6 170 44.7
Carub.0007s0581 Capsella rubella HOM05D003525 ORTHO05D004578 4.9e-25 118.2 167 46.7
PGR142G1190 Punica granatum HOM05D003525 ORTHO05D004578 4.9e-25 118.2 161 48.4
VMungo1127G1959 Vigna mungo HOM05D003525 ORTHO05D004578 4.9e-25 118.2 161 48.4
Thhalv10025082m.g Eutrema salsugineum HOM05D003525 ORTHO05D004578 6.4e-25 117.9 167 46.7
PGSC0003DMG400000723 Solanum tuberosum HOM05D003525 ORTHO05D004578 6.4e-25 117.9 161 46.0
CARHR242770 Cardamine hirsuta HOM05D003525 ORTHO05D004578 8.4e-25 117.5 168 47.6
ECA234G0118 Erigeron canadensis HOM05D003525 ORTHO05D004578 8.4e-25 117.5 161 47.8
BcaB03g11830 Brassica carinata HOM05D003525 ORTHO05D004578 1.1e-24 117.1 173 46.2
A08p16780 Brassica napus HOM05D003525 ORTHO05D004578 1.1e-24 117.1 164 47.6
AL7G16740 Arabidopsis lyrata HOM05D003525 ORTHO05D004578 1.4e-24 116.7 169 46.7
AT4G34490 Arabidopsis thaliana HOM05D003525 ORTHO05D004578 1.9e-24 116.3 168 45.8
EL10Ac9g21728 Beta vulgaris HOM05D003525 ORTHO05D004578 1.9e-24 116.3 161 44.7
Sp7g32280 Schrenkiella parvula HOM05D003525 ORTHO05D004578 1.9e-24 116.3 167 46.1
CAN.G1412.2 Capsicum annuum HOM05D003525 ORTHO05D004578 2.4e-24 115.9 163 47.9
Oeu003718.1 Olea europaea HOM05D003525 ORTHO05D004578 2.4e-24 115.9 161 44.7
Sed0027089 Sechium edule HOM05D003525 ORTHO05D004578 3.2e-24 115.5 161 46.0
unitig_8.g3568 Utricularia gibba HOM05D003525 ORTHO05D004578 4.2e-24 115.2 162 46.9
Aqoxy6G01092 Aquilegia oxysepala HOM05D003525 ORTHO05D004578 5.5e-24 114.8 161 48.4
BraA08t33643Z Brassica rapa HOM05D003525 ORTHO05D004578 9.3e-24 114.0 165 47.9
HanXRQChr16g0505731 Helianthus annuus HOM05D003525 ORTHO05D004578 1.2e-23 113.6 160 43.1
CAN.G1.44 Capsicum annuum HOM05D003525 ORTHO05D004578 1.6e-23 113.2 161 46.0
Medtr4g069960 Medicago truncatula HOM05D003525 ORTHO05D004578 2.1e-23 112.8 161 49.1
HanXRQChr10g0307161 Helianthus annuus HOM05D003525 ORTHO05D004578 3.5e-23 112.1 161 45.3
arahy.Tifrunner.gnm1.ann1.19SFKA Arachis hypogaea HOM05D003525 ORTHO05D004578 6.0e-23 111.3 162 45.1
A01p03970 Brassica napus HOM05D003525 ORTHO05D004578 6.0e-23 111.3 171 45.6
C03p85740 Brassica napus HOM05D003525 ORTHO05D004578 6.0e-23 111.3 166 47.0
BolC3t20862H Brassica oleracea HOM05D003525 ORTHO05D004578 6.0e-23 111.3 166 47.0
BraA01t00384Z Brassica rapa HOM05D003525 ORTHO05D004578 6.0e-23 111.3 169 45.0
Sc18g0004490 Simmondsia chinensis HOM05D003525 ORTHO05D004578 1.3e-22 110.2 163 43.6
arahy.Tifrunner.gnm1.ann1.PLG8VX Arachis hypogaea HOM05D003525 ORTHO05D004578 2.3e-22 109.4 164 44.5
Lsat_1_v5_gn_7_89340 Lactuca sativa HOM05D003525 ORTHO05D004578 5.1e-22 108.2 160 44.4
BolC1t00417H Brassica oleracea HOM05D003525 ORTHO05D004578 6.7e-22 107.8 174 44.3
unitig_22.g5174 Utricularia gibba HOM05D003525 ORTHO05D004578 6.7e-22 107.8 162 43.2
C01p04280 Brassica napus HOM05D003525 ORTHO05D004578 1.1e-21 107.1 174 43.7
CDE07G1879 Ceratophyllum demersum HOM05D003525 ORTHO05D004578 1.5e-21 106.7 162 43.8
HanXRQChr04g0127991 Helianthus annuus HOM05D003525 ORTHO05D004578 1.5e-21 106.7 165 43.6
MBI16_g38644_MAGBIO Magnolia biondii HOM05D003525 ORTHO05D004578 3.1e-19 99.0 161 41.6
vmacro02112 Vaccinium macrocarpon HOM05D003525 ORTHO05D004578 2.0e-18 96.3 94 58.5
ATR0733G133 Amborella trichopoda HOM05D003525 ORTHO05D004578 2.6e-18 95.9 159 42.8
HPP92_017152 Vanilla planifolia HOM05D003525 ORTHO05D004578 5.8e-18 94.7 160 38.8
Zm00001eb040800 Zea mays HOM05D003525 ORTHO05D004578 4.2e-16 88.6 161 39.1
HPP92_017451 Vanilla planifolia HOM05D003525 ORTHO05D025801 5.5e-16 88.2 93 53.8
Os08g0447900 Oryza sativa ssp. japonica HOM05D003525 ORTHO05D004578 1.6e-15 86.7 167 38.3
Zm00001eb055650 Zea mays HOM05D003525 ORTHO05D004578 2.7e-15 85.9 164 36.0
Eucgr.I01265 Eucalyptus grandis HOM05D003525 ORTHO05D004578 4.6e-15 85.1 112 49.1
SEGI_09930 Sequoiadendron giganteum HOM05D003525 ORTHO05D004578 1.8e-14 83.2 166 33.1
MBI16_g46920_MAGBIO Magnolia biondii HOM05D003525 ORTHO05D025801 5.1e-14 81.6 79 58.2
Os03g0722600 Oryza sativa ssp. japonica HOM05D003525 ORTHO05D004578 1.6e-12 76.6 167 35.9
Pp3c4_1720 Physcomitrium patens HOM05D003525 ORTHO05D004578 2.6e-10 69.3 171 31.6
MD10G1122300 Malus domestica HOM05D003525 ORTHO05D025801 1.4e-08 63.5 67 58.2
SMO174G0095 Selaginella moellendorffii HOM05D003525 ORTHO05D004578 5.5e-08 61.6 120 30.0
Mapoly0074s0004 Marchantia polymorpha HOM05D003525 ORTHO05D004578 2.3e-06 56.2 72 40.3
Oeu029126.1 Olea europaea HOM05D003525 ORTHO05D004578 3.9e-06 55.5 164 29.9


User provided reference genes

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