Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.02G222900 Manihot esculenta HOM05D005863 ORTHO05D003355 1.6e-177 625.9 316 100.0
Potri.007G102500 Populus trichocarpa HOM05D005863 ORTHO05D003355 1.0e-41 174.9 345 37.7
GSVIVG01014696001 Vitis vinifera HOM05D005863 ORTHO05D003355 6.3e-36 155.6 328 36.0
TAR629G0397 Trochodendron aralioides HOM05D005863 ORTHO05D003355 3.2e-32 143.3 356 33.4
Sabra07G0084200 Salix brachista HOM05D005863 ORTHO05D003355 1.6e-31 141.0 377 33.4
Dinv10342 Davidia involucrata HOM05D005863 ORTHO05D003355 3.3e-29 133.3 323 34.7
CiPaw.12G138700 Carya illinoinensis HOM05D014719 ORTHO05D003355 4.8e-28 129.4 333 34.2
Cpa.g.sc12.119 Carica papaya HOM05D005863 ORTHO05D003355 1.8e-27 127.5 323 34.1
QL08p003943 Quercus lobata HOM05D014719 ORTHO05D003355 1.9e-24 117.5 330 33.0
Hma1.2p1_2829F.1_g329210 Hydrangea macrophylla HOM05D005863 ORTHO05D003355 5.5e-24 115.9 330 33.3
Rhsim04G0012300 Rhododendron simsii HOM05D005863 ORTHO05D003355 2.1e-23 114.0 330 31.2
TWI38G1195 Tripterygium wilfordii HOM05D005863 ORTHO05D003355 8.0e-23 112.1 324 30.9
vmacro09646 Vaccinium macrocarpon HOM05D005863 ORTHO05D003355 5.2e-22 109.4 335 31.6
Thecc.07G012300 Theobroma cacao HOM05D005863 ORTHO05D003355 3.4e-21 106.7 319 29.5
Ciclev10008896m.g Citrus clementina HOM05D005863 ORTHO05D003355 7.5e-21 105.5 321 31.5
Actinidia37152 Actinidia chinensis HOM05D005863 ORTHO05D003355 7.7e-18 95.5 326 31.0
Eucgr.F03684 Eucalyptus grandis HOM05D005863 ORTHO05D003355 2.2e-17 94.0 326 28.2
Lalb_Chr18g0052131 Lupinus albus HOM05D005863 ORTHO05D003355 3.8e-17 93.2 325 28.0
Glyma.09G051600 Glycine max HOM05D005863 ORTHO05D003355 2.1e-15 87.4 358 27.4
Prupe.8G267500 Prunus persica HOM05D014719 ORTHO05D003355 3.6e-15 86.7 298 29.9
RcHm_v2.0_Chr3g0496661 Rosa chinensis HOM05D014719 ORTHO05D003355 4.7e-15 86.3 318 32.1
Atru.chr2.3697 Acer truncatum HOM05D005863 ORTHO05D003355 1.0e-14 85.1 144 38.9
CSS0034444 Camellia sinensis var. sinensis HOM05D000747 ORTHO05D001683 4.4e-13 79.7 135 35.6
Haze_09834 Corylus avellana HOM05D014719 ORTHO05D003355 2.8e-12 77.0 245 30.2
Gohir.D13G135600 Gossypium hirsutum HOM05D005863 ORTHO05D003355 1.4e-11 74.7 320 26.6
Gorai.013G152000 Gossypium raimondii HOM05D005863 ORTHO05D003355 1.4e-11 74.7 320 26.6
Gohir.A13G132200 Gossypium hirsutum HOM05D005863 ORTHO05D003355 2.4e-11 73.9 76 46.1
Ca_02000_v3 Cicer arietinum L. HOM05D005863 ORTHO05D003355 9.1e-11 72.0 315 26.3
Psat1g149600 Pisum sativum HOM05D005863 ORTHO05D003355 1.6e-10 71.2 341 25.8
Lj6g0020676 Lotus japonicus HOM05D005863 ORTHO05D003355 2.0e-10 70.9 337 27.0
CANSAT78G1634 Cannabis sativa HOM05D005863 ORTHO05D003355 1.3e-09 68.2 325 25.8
Rhsim10G0199400 Rhododendron simsii HOM05D005863 ORTHO05D003355 2.3e-09 67.4 88 42.0
TPR.G1700 Trifolium pratense HOM05D005863 ORTHO05D003355 5.0e-09 66.2 352 24.4
Rhsim10G0199200 Rhododendron simsii HOM05D005863 ORTHO05D003355 1.9e-08 64.3 274 26.3
ECA236G3808 Erigeron canadensis HOM05D000747 ORTHO05D001683 2.8e-07 60.5 59 49.2
Phvul.009G242100 Phaseolus vulgaris HOM05D005863 ORTHO05D003355 3.6e-07 60.1 267 27.0
PGR031G0790 Punica granatum HOM05D005863 ORTHO05D003355 8.0e-07 58.9 210 29.5
Lsat_1_v5_gn_7_114301 Lactuca sativa HOM05D005863 ORTHO05D003355 1.0e-06 58.5 39 61.5
VMungo1309G2065 Vigna mungo HOM05D001598 ORTHO05D002757 2.3e-06 57.4 339 26.0
AUR62036468 Chenopodium quinoa HOM05D038882 ORTHO05D003355 4.0e-06 56.6 320 24.4
COL.COLO4_09843 Corchorus olitorius HOM05D005863 ORTHO05D003355 8.9e-06 55.5 97 39.2
Medtr2g036070 Medicago truncatula HOM05D005863 ORTHO05D003355 8.9e-06 55.5 283 26.5


User provided reference genes

Program Settings