Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.02G219900 Manihot esculenta HOM05D006666 ORTHO05D008276 2.1e-97 359.0 177 100.0
Potri.004G066900 Populus trichocarpa HOM05D006666 ORTHO05D008276 1.3e-30 137.1 137 55.5
CiPaw.16G075700 Carya illinoinensis HOM05D006666 ORTHO05D008276 6.7e-27 124.8 129 55.8
Atru.chr9.23 Acer truncatum HOM05D006666 ORTHO05D008276 3.3e-26 122.5 125 54.4
TAR629G2781 Trochodendron aralioides HOM05D006666 ORTHO05D008276 1.3e-25 120.6 73 75.3
Haze_18405 Corylus avellana HOM05D006666 ORTHO05D008276 6.2e-25 118.2 140 52.9
Cfa017808 Carpinus fangiana HOM05D006666 ORTHO05D008276 8.1e-25 117.9 144 51.4
CSS0032824 Camellia sinensis var. sinensis HOM05D006666 ORTHO05D008276 1.1e-24 117.5 134 52.2
Sabra04G0044800 Salix brachista HOM05D006666 ORTHO05D008276 4.0e-24 115.5 175 43.4
FAN13G2387 Fragaria x ananassa HOM05D006666 ORTHO05D008276 5.3e-24 115.2 92 63.0
Lj5g0025802 Lotus japonicus HOM05D006666 ORTHO05D008276 5.3e-24 115.2 131 51.9
BraA07t28933Z Brassica rapa HOM05D006666 ORTHO05D008276 6.9e-24 114.8 103 60.2
Prupe.5G245400 Prunus persica HOM05D006666 ORTHO05D008276 9.0e-24 114.4 137 47.4
FAN04G1657 Fragaria x ananassa HOM05D006666 ORTHO05D008276 1.2e-23 114.0 92 62.0
TWI81G0077 Tripterygium wilfordii HOM05D006666 ORTHO05D008276 1.2e-23 114.0 84 66.7
BcaC06g35338 Brassica carinata HOM05D006666 ORTHO05D008276 1.5e-23 113.6 103 59.2
C07p17240 Brassica napus HOM05D006666 ORTHO05D008276 1.5e-23 113.6 103 59.2
BolC7t42228H Brassica oleracea HOM05D006666 ORTHO05D008276 1.5e-23 113.6 103 59.2
Dinv09758 Davidia involucrata HOM05D006666 ORTHO05D008276 1.5e-23 113.6 110 57.3
BcaB03g13950 Brassica carinata HOM05D006666 ORTHO05D008276 2.6e-23 112.8 103 60.2
Ca_09926_v3 Cicer arietinum L. HOM05D006666 ORTHO05D008276 2.6e-23 112.8 74 71.6
FAN08G1977 Fragaria x ananassa HOM05D006666 ORTHO05D008276 3.4e-23 112.5 92 60.9
ATR0124G047 Amborella trichopoda HOM05D006666 ORTHO05D008276 4.5e-23 112.1 87 62.1
Eucgr.H00663 Eucalyptus grandis HOM05D006666 ORTHO05D008276 5.8e-23 111.7 75 72.0
FvH4_5g18600 Fragaria vesca HOM05D006666 ORTHO05D008276 5.8e-23 111.7 73 72.6
FAN18G1406 Fragaria x ananassa HOM05D006666 ORTHO05D008276 5.8e-23 111.7 73 72.6
A07p11450 Brassica napus HOM05D006666 ORTHO05D008276 7.6e-23 111.3 103 59.2
Glyma.10G174200 Glycine max HOM05D006666 ORTHO05D008276 7.6e-23 111.3 98 62.2
Ciclev10023646m.g Citrus clementina HOM05D006666 ORTHO05D008276 1.0e-22 110.9 139 48.2
GSVIVG01024243001 Vitis vinifera HOM05D006666 ORTHO05D008276 1.0e-22 110.9 67 77.6
Hma1.2p1_0816F.1_g222970 Hydrangea macrophylla HOM05D006666 ORTHO05D008276 1.7e-22 110.2 116 54.3
Sc10g0008660 Simmondsia chinensis HOM05D006666 ORTHO05D008276 1.7e-22 110.2 109 52.3
AUR62037011 Chenopodium quinoa HOM05D006666 ORTHO05D008276 2.2e-22 109.8 113 54.0
PSO063G5885 Papaver somniferum HOM05D006666 ORTHO05D008276 2.2e-22 109.8 81 69.1
PSO782G1773 Papaver somniferum HOM05D006666 ORTHO05D008276 2.2e-22 109.8 81 69.1
PGR083G1370 Punica granatum HOM05D006666 ORTHO05D008276 2.2e-22 109.8 118 55.9
vmacro17828 Vaccinium macrocarpon HOM05D006666 ORTHO05D008276 2.2e-22 109.8 81 70.4
MBI06_g22566_MAGBIO Magnolia biondii HOM05D006666 ORTHO05D008276 2.9e-22 109.4 79 67.1
CARHR027620 Cardamine hirsuta HOM05D006666 ORTHO05D008276 3.8e-22 109.0 84 67.9
Ah.15g090740 Amaranthus hybridus HOM05D006666 ORTHO05D008276 4.9e-22 108.6 88 62.5
MD14G1247300 Malus domestica HOM05D006666 ORTHO05D008276 4.9e-22 108.6 147 47.6
AL1G41680 Arabidopsis lyrata HOM05D006666 ORTHO05D008276 6.5e-22 108.2 84 66.7
Medtr1g077550 Medicago truncatula HOM05D006666 ORTHO05D008276 6.5e-22 108.2 136 47.8
RcHm_v2.0_Chr7g0176901 Rosa chinensis HOM05D006666 ORTHO05D008276 6.5e-22 108.2 73 71.2
BcaC05g26820 Brassica carinata HOM05D006666 ORTHO05D008276 8.4e-22 107.8 78 67.9
C05p26900 Brassica napus HOM05D006666 ORTHO05D008276 8.4e-22 107.8 78 67.9
BolC5t31408H Brassica oleracea HOM05D006666 ORTHO05D008276 8.4e-22 107.8 78 67.9
Hund06740 Selenicereus undatus HOM05D006666 ORTHO05D008276 1.1e-21 107.5 80 67.5
AT1G28150 Arabidopsis thaliana HOM05D006666 ORTHO05D008276 1.4e-21 107.1 84 65.5
Thhalv10009115m.g Eutrema salsugineum HOM05D006666 ORTHO05D008276 1.4e-21 107.1 78 67.9
Actinidia02653 Actinidia chinensis HOM05D006666 ORTHO05D008276 1.9e-21 106.7 83 68.7
AUR62006207 Chenopodium quinoa HOM05D006666 ORTHO05D008276 1.9e-21 106.7 90 60.0
Sp1g24340 Schrenkiella parvula HOM05D006666 ORTHO05D008276 2.5e-21 106.3 77 68.8
HanXRQChr05g0141151 Helianthus annuus HOM05D006666 ORTHO05D008276 3.2e-21 105.9 108 53.7
MSTRG.11567 Avicennia marina HOM05D006666 ORTHO05D008276 4.2e-21 105.5 73 68.5
Lalb_Chr21g0311701 Lupinus albus HOM05D006666 ORTHO05D008276 4.2e-21 105.5 73 65.8
Nitab4.5_0009307g0050 Nicotiana tabacum HOM05D006666 ORTHO05D008276 4.2e-21 105.5 85 60.0
Sopen03g029740 Solanum pennellii HOM05D006666 ORTHO05D008276 4.2e-21 105.5 74 67.6
PGSC0003DMG400015210 Solanum tuberosum HOM05D006666 ORTHO05D008276 4.2e-21 105.5 73 65.8
BraA09t39302Z Brassica rapa HOM05D006666 ORTHO05D008276 5.5e-21 105.1 78 67.9
Peaxi162Scf00171g00030 Petunia axillaris HOM05D006666 ORTHO05D008276 5.5e-21 105.1 85 58.8
Psat6g054440 Pisum sativum HOM05D006666 ORTHO05D008276 5.5e-21 105.1 129 49.6
A09p37900 Brassica napus HOM05D006666 ORTHO05D008276 7.1e-21 104.8 78 67.9
Solyc03g019880.3 Solanum lycopersicum HOM05D006666 ORTHO05D008276 7.1e-21 104.8 73 65.8
TPR.G8870 Trifolium pratense HOM05D006666 ORTHO05D008276 7.1e-21 104.8 73 68.5
DCAR_011403 Daucus carota HOM05D006666 ORTHO05D008276 9.3e-21 104.4 87 55.2
Phvul.L006501 Phaseolus vulgaris HOM05D006666 ORTHO05D008276 9.3e-21 104.4 73 69.9
THA.LOC104812606 Tarenaya hassleriana HOM05D006666 ORTHO05D008276 1.2e-20 104.0 104 56.7
Rhsim08G0006200 Rhododendron simsii HOM05D006666 ORTHO05D008276 3.5e-20 102.4 82 67.1
Nitab4.5_0008182g0010 Nicotiana tabacum HOM05D006666 ORTHO05D008276 4.6e-20 102.1 73 64.4
VMungo0720G1342 Vigna mungo HOM05D006666 ORTHO05D008276 4.6e-20 102.1 73 67.1
Glyma.20G216200 Glycine max HOM05D006666 ORTHO05D008276 6.0e-20 101.7 72 68.1
Nn4g25066 Nelumbo nucifera HOM05D006666 ORTHO05D008276 6.0e-20 101.7 80 65.0
SalBow5G0154 Salvia bowleyana HOM05D006666 ORTHO05D008276 6.0e-20 101.7 73 67.1
Aa31sc45G80 Aethionema arabicum HOM05D006666 ORTHO05D008276 1.0e-19 100.9 105 54.3
EL10Ac7g16891 Beta vulgaris HOM05D006666 ORTHO05D008276 1.0e-19 100.9 87 57.5
Carub.0001s2658 Capsella rubella HOM05D006666 ORTHO05D008276 1.0e-19 100.9 81 64.2
Cc00_g07700 Coffea canephora HOM05D006666 ORTHO05D008276 1.8e-19 100.1 74 62.2
ECA233G5286 Erigeron canadensis HOM05D006666 ORTHO05D008276 2.3e-19 99.8 71 64.8
Os04g0528100 Oryza sativa ssp. japonica HOM05D006666 ORTHO05D008276 3.0e-19 99.4 103 52.4
Duzib205G1681 Durio zibethinus HOM05D006666 ORTHO05D008276 3.9e-19 99.0 108 51.9
MD06G1241100 Malus domestica HOM05D006666 ORTHO05D008276 5.1e-19 98.6 149 43.0
Thecc.03G072200 Theobroma cacao HOM05D006666 ORTHO05D008276 5.1e-19 98.6 82 62.2
SGA_v2.0_scaffold25G10726 Striga asiatica HOM05D006666 ORTHO05D008276 6.7e-19 98.2 73 63.0
HPP92_021068 Vanilla planifolia HOM05D006666 ORTHO05D008276 6.7e-19 98.2 83 62.7
Sed0024015 Sechium edule HOM05D006666 ORTHO05D008276 8.7e-19 97.8 98 53.1
Gohir.A07G062700 Gossypium hirsutum HOM05D006666 ORTHO05D008276 1.1e-18 97.4 107 48.6
CAN.G861.22 Capsicum annuum HOM05D006666 ORTHO05D008276 1.5e-18 97.1 75 61.3
Pp3c19_21970 Physcomitrium patens HOM05D006666 ORTHO05D008276 2.5e-18 96.3 142 39.4
SEGI_19522 Sequoiadendron giganteum HOM05D006666 ORTHO05D008276 2.5e-18 96.3 94 54.3
arahy.Tifrunner.gnm1.ann1.UGS5Z8 Arachis hypogaea HOM05D006666 ORTHO05D008276 3.3e-18 95.9 100 49.0
MELO3C001965.2 Cucumis melo HOM05D006666 ORTHO05D008276 3.3e-18 95.9 73 60.3
unitig_749.g13724 Utricularia gibba HOM05D006666 ORTHO05D008276 4.3e-18 95.5 76 61.8
Gorai.001G070900 Gossypium raimondii HOM05D006666 ORTHO05D008276 5.7e-18 95.1 107 47.7
CDE04G3444 Ceratophyllum demersum HOM05D006666 ORTHO05D008276 7.4e-18 94.7 112 47.3
ClCG04G012450 Citrullus lanatus HOM05D006666 ORTHO05D008276 7.4e-18 94.7 119 47.1
Gohir.D07G067300 Gossypium hirsutum HOM05D006666 ORTHO05D008276 9.6e-18 94.4 111 46.8
Lsat_1_v5_gn_8_1660 Lactuca sativa HOM05D006666 ORTHO05D008276 9.6e-18 94.4 76 59.2
CDE06G1954 Ceratophyllum demersum HOM05D006666 ORTHO05D008276 1.6e-17 93.6 86 53.5
Migut.O00284 Erythranthe guttata HOM05D006666 ORTHO05D008276 2.8e-17 92.8 75 64.0
SalBow1G4610 Salvia bowleyana HOM05D006666 ORTHO05D008276 3.7e-17 92.4 66 65.2
QL10p036089 Quercus lobata HOM05D006666 ORTHO05D008276 4.8e-17 92.0 71 63.4
QL10p036477 Quercus lobata HOM05D006666 ORTHO05D008276 1.1e-16 90.9 61 68.9
Sabra11G0106200 Salix brachista HOM05D006666 ORTHO05D008276 1.4e-16 90.5 63 71.4
Sabra17G0092500 Salix brachista HOM05D006666 ORTHO05D008276 1.4e-16 90.5 63 71.4
Aqoxy3G04334 Aquilegia oxysepala HOM05D006666 ORTHO05D008276 3.1e-16 89.4 81 56.8
Mapoly0096s0047 Marchantia polymorpha HOM05D006666 ORTHO05D008276 9.0e-16 87.8 81 55.6
AagrBONN_evm.TU.Sc2ySwM_344.686 Anthoceros agrestis HOM05D006666 ORTHO05D008276 1.2e-15 87.4 88 50.0
SMO143G0007 Selaginella moellendorffii HOM05D006666 ORTHO05D008276 2.6e-15 86.3 89 50.6
Oeu038394.2 Olea europaea HOM05D006666 ORTHO05D008276 3.4e-15 85.9 62 69.4
CsaV3_1G005250 Cucumis sativus L. HOM05D006666 ORTHO05D008276 7.6e-15 84.7 60 61.7
COL.COLO4_25502 Corchorus olitorius HOM05D006666 ORTHO05D008276 2.5e-13 79.7 60 68.3
MCO08G267 Micromonas commoda HOM05D006666 ORTHO05D008276 6.1e-12 75.1 80 46.2
Hma1.2p1_0816F.1_g222980 Hydrangea macrophylla HOM05D006666 ORTHO05D008276 3.9e-11 72.4 58 63.8
PRCOL_00004364 Prasinoderma coloniale HOM05D006666 ORTHO05D008276 5.7e-10 68.6 60 51.7
COL.COLO4_37022 Corchorus olitorius HOM05D006666 ORTHO05D008276 6.9e-08 61.6 52 63.5
Cre03.g203800 Chlamydomonas reinhardtii HOM05D006666 ORTHO05D008276 5.9e-07 58.5 43 58.1


User provided reference genes

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