Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.02G212860 Manihot esculenta HOM05D016702 ORTHO05D000001 1.3e-79 299.7 152 100.0
Manes.15G175912 Manihot esculenta HOM05D016702 ORTHO05D000001 8.8e-44 180.6 170 60.0
Manes.05G146201 Manihot esculenta HOM05D016702 ORTHO05D000001 1.1e-43 180.3 137 71.5
Manes.01G066175 Manihot esculenta HOM05D016702 ORTHO05D000001 4.4e-43 178.3 148 68.9
Manes.12G065476 Manihot esculenta HOM05D016702 ORTHO05D000001 1.1e-33 147.1 148 60.8
Atru.chr8.532 Acer truncatum HOM05D000002 ORTHO05D000001 1.9e-14 83.2 142 37.3
ECA232G3568 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.8e-11 70.9 182 30.8
Manes.05G129701 Manihot esculenta HOM05D016702 ORTHO05D000001 2.2e-10 69.7 149 39.6
Manes.10G109626 Manihot esculenta HOM05D016702 ORTHO05D000001 3.7e-10 68.9 158 32.3
VMungo0540G0563 Vigna mungo HOM05D000002 ORTHO05D000001 4.9e-10 68.6 108 32.4
Eucgr.E02344 Eucalyptus grandis HOM05D000002 ORTHO05D000001 1.1e-09 67.4 84 39.3
Psat2g152960 Pisum sativum HOM05D000002 ORTHO05D000001 1.8e-09 66.6 109 33.0
Psat6g102280 Pisum sativum HOM05D000002 ORTHO05D000001 1.8e-09 66.6 109 33.0
Hma1.2p1_0018F.1_g012350 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 3.2e-09 65.9 80 41.2
COL.COLO4_24669 Corchorus olitorius HOM05D014020 ORTHO05D000001 4.1e-09 65.5 77 48.1
Psat0s454g0080 Pisum sativum HOM05D000002 ORTHO05D000001 5.4e-09 65.1 178 24.2
Psat7g134120 Pisum sativum HOM05D000002 ORTHO05D000001 5.4e-09 65.1 109 32.1
Hma1.2p1_0067F.1_g037120 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 9.2e-09 64.3 147 28.6
VMungo1309G3040 Vigna mungo HOM05D000002 ORTHO05D000001 1.2e-08 63.9 75 40.0
Migut.J01156 Erythranthe guttata HOM05D000002 ORTHO05D000001 2.7e-08 62.8 76 42.1
Atru.chr7.838 Acer truncatum HOM05D000002 ORTHO05D000001 3.5e-08 62.4 73 45.2
COL.COLO4_12289 Corchorus olitorius HOM05D000002 ORTHO05D000001 3.5e-08 62.4 62 46.8
COL.COLO4_22605 Corchorus olitorius HOM05D014020 ORTHO05D000001 3.5e-08 62.4 79 41.8
COL.COLO4_08663 Corchorus olitorius HOM05D014020 ORTHO05D000001 5.9e-08 61.6 77 45.5
Hma1.2p1_0602F.1_g187610 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 5.9e-08 61.6 221 24.0
Sopen12g009430 Solanum pennellii HOM05D008648 ORTHO05D000001 5.9e-08 61.6 72 44.4
Sopen01g029710 Solanum pennellii HOM05D000002 ORTHO05D000001 7.8e-08 61.2 80 41.2
Sopen06g032630 Solanum pennellii HOM05D000002 ORTHO05D000001 7.8e-08 61.2 77 42.9
Sopen12g023510 Solanum pennellii HOM05D000002 ORTHO05D000001 7.8e-08 61.2 77 41.6
Manes.13G068154 Manihot esculenta HOM05D016702 ORTHO05D000001 1.0e-07 60.8 133 30.8
TWI75G0432 Tripterygium wilfordii HOM05D017849 ORTHO05D000001 1.0e-07 60.8 183 25.1
PSO013G0223 Papaver somniferum HOM05D000002 ORTHO05D000001 1.3e-07 60.5 179 29.6
Psat5g305960 Pisum sativum HOM05D000002 ORTHO05D000001 1.3e-07 60.5 109 31.2
Sopen05g011750 Solanum pennellii HOM05D000002 ORTHO05D000001 1.3e-07 60.5 77 41.6
Sopen12g010660 Solanum pennellii HOM05D000002 ORTHO05D000001 1.3e-07 60.5 77 40.3
Hma1.2p1_1940F.1_g308370 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.3e-07 59.7 73 43.8
Sopen11g003490 Solanum pennellii HOM05D000002 ORTHO05D000001 2.3e-07 59.7 76 40.8
CSS0045539 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.0e-07 59.3 191 26.2
COL.COLO4_11301 Corchorus olitorius HOM05D014020 ORTHO05D000001 3.0e-07 59.3 74 41.9
Nitab4.5_0007044g0010 Nicotiana tabacum HOM05D000002 ORTHO05D000001 3.9e-07 58.9 80 43.8
Sopen02g010030 Solanum pennellii HOM05D000002 ORTHO05D000001 5.0e-07 58.5 73 41.1
Sopen06g017500 Solanum pennellii HOM05D000002 ORTHO05D000001 5.0e-07 58.5 77 40.3
Migut.F01590 Erythranthe guttata HOM05D000002 ORTHO05D000001 8.6e-07 57.8 214 25.7
Migut.H01198 Erythranthe guttata HOM05D000002 ORTHO05D000001 8.6e-07 57.8 214 25.7
CAN.G134.31 Capsicum annuum HOM05D000085 ORTHO05D006184 1.1e-06 57.4 79 39.2
Lj2g0024035 Lotus japonicus HOM05D000002 ORTHO05D000001 1.1e-06 57.4 109 34.9
Rhsim02G0160900 Rhododendron simsii HOM05D000002 ORTHO05D000001 1.1e-06 57.4 209 26.8
Sopen04g008990 Solanum pennellii HOM05D000002 ORTHO05D000001 1.1e-06 57.4 76 39.5
TAR099G0005 Trochodendron aralioides HOM05D000002 ORTHO05D000001 1.1e-06 57.4 82 36.6
TAR301G0003 Trochodendron aralioides HOM05D000002 ORTHO05D000001 1.1e-06 57.4 72 36.1
Migut.F01917 Erythranthe guttata HOM05D000002 ORTHO05D000001 1.5e-06 57.0 72 40.3
Rhsim05G0182900 Rhododendron simsii HOM05D000002 ORTHO05D000001 1.5e-06 57.0 73 45.2
Hma1.2p1_1446F.1_g283970 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.9e-06 56.6 194 26.8
Nitab4.5_0000485g0090 Nicotiana tabacum HOM05D000002 ORTHO05D000001 1.9e-06 56.6 76 35.5
CSS0021158 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.5e-06 56.2 170 25.9
Atru.chr6.358 Acer truncatum HOM05D000002 ORTHO05D000001 3.3e-06 55.8 75 40.0
CAN.G741.25 Capsicum annuum HOM05D013392 ORTHO05D000001 3.3e-06 55.8 62 46.8
COL.COLO4_38540 Corchorus olitorius HOM05D026776 ORTHO05D000001 4.3e-06 55.5 60 45.0
Hma1.2p1_1036F.1_g250540 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 4.3e-06 55.5 135 30.4
Sopen04g009020 Solanum pennellii HOM05D000002 ORTHO05D000001 4.3e-06 55.5 73 38.4
COL.COLO4_35628 Corchorus olitorius HOM05D014020 ORTHO05D000001 5.6e-06 55.1 77 40.3
ECA233G6231 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.6e-06 55.1 82 45.1
ECA234G0762 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.6e-06 55.1 82 45.1
Atru.chr4.3156 Acer truncatum HOM05D000002 ORTHO05D000001 7.3e-06 54.7 99 34.3
Actinidia35992 Actinidia chinensis HOM05D000002 ORTHO05D000001 7.3e-06 54.7 73 38.4
Nitab4.5_0000905g0060 Nicotiana tabacum HOM05D000002 ORTHO05D000001 7.3e-06 54.7 73 37.0
Dinv03566 Davidia involucrata HOM05D013570 ORTHO05D000001 9.5e-06 54.3 117 29.1


User provided reference genes

Program Settings