Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.02G202577 Manihot esculenta HOM05D015690 ORTHO05D018993 1.1e-59 233.0 111 100.0
Lalb_Chr03g0040131 Lupinus albus HOM05D000002 ORTHO05D000047 3.5e-18 95.1 113 40.7
Manes.16G017966 Manihot esculenta HOM05D000002 ORTHO05D000047 3.0e-17 92.0 105 46.7
Manes.08G092911 Manihot esculenta HOM05D011450 ORTHO05D018993 7.4e-16 87.4 112 42.9
Lalb_Chr15g0078731 Lupinus albus HOM05D000002 ORTHO05D000047 3.1e-14 82.0 118 39.8
Manes.07G054622 Manihot esculenta HOM05D000002 ORTHO05D000047 2.9e-12 75.5 106 39.6
Gohir.D07G041350 Gossypium hirsutum HOM05D015690 ORTHO05D018993 2.1e-10 69.3 114 34.2
Lalb_Chr19g0135971 Lupinus albus HOM05D000002 ORTHO05D000047 4.6e-10 68.2 116 38.8
Ca_13880_v3 Cicer arietinum L. HOM05D015690 ORTHO05D018993 6.1e-10 67.8 106 35.8
Sed0003227 Sechium edule HOM05D000002 ORTHO05D000047 7.9e-10 67.4 107 36.4
Ca_20716_v3 Cicer arietinum L. HOM05D000002 ORTHO05D013066 1.4e-09 66.6 112 34.8
Ca_12135_v3 Cicer arietinum L. HOM05D000002 ORTHO05D013066 1.8e-09 66.2 110 32.7
Ca_07066_v3 Cicer arietinum L. HOM05D013328 ORTHO05D013066 2.3e-09 65.9 112 33.0
TPR.G38737 Trifolium pratense HOM05D000002 ORTHO05D000047 3.0e-09 65.5 97 36.1
Hma1.2p1_0182F.1_g080480 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.1e-08 63.5 105 35.2
Hma1.2p1_1132F.1_g260270 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.1e-08 63.5 105 35.2
Hma1.2p1_1214F.1_g267555 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.1e-08 63.5 105 35.2
Hma1.2p1_1214F.1_g267560 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.1e-08 63.5 105 35.2
Hma1.2p1_1594F.1_g292660 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.1e-08 63.5 105 35.2
Hma1.2p1_2815F.1_g328920 Hydrangea macrophylla HOM05D002126 ORTHO05D002195 1.1e-08 63.5 105 35.2
TPR.G28102 Trifolium pratense HOM05D000002 ORTHO05D000047 2.5e-08 62.4 112 37.5
arahy.Tifrunner.gnm1.ann1.IY5TEH Arachis hypogaea HOM05D011450 ORTHO05D011017 3.3e-08 62.0 93 32.3
arahy.Tifrunner.gnm1.ann1.QZNL7B Arachis hypogaea HOM05D011450 ORTHO05D011017 1.3e-07 60.1 94 33.0
Ca_08213_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000047 1.7e-07 59.7 113 31.9
TPR.G21631 Trifolium pratense HOM05D000002 ORTHO05D000047 1.7e-07 59.7 93 34.4
Ca_11682_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000047 2.2e-07 59.3 93 35.5
Ca_22226_v3 Cicer arietinum L. HOM05D013328 ORTHO05D013066 2.2e-07 59.3 110 30.9
TPR.G24210 Trifolium pratense HOM05D000002 ORTHO05D000047 2.2e-07 59.3 93 33.3
TPR.G39354 Trifolium pratense HOM05D000002 ORTHO05D000047 2.2e-07 59.3 111 33.3
VMungo0720G1246 Vigna mungo HOM05D000002 ORTHO05D000001 2.2e-07 59.3 104 37.5
Ca_13918_v3 Cicer arietinum L. HOM05D013328 ORTHO05D013066 6.3e-07 57.8 110 30.9
Ca_23040_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000047 8.2e-07 57.4 118 34.7
Rhsim05G0070200 Rhododendron simsii HOM05D000002 ORTHO05D000047 8.2e-07 57.4 110 29.1
QL11p054840 Quercus lobata HOM05D000002 ORTHO05D000001 1.1e-06 57.0 107 31.8
TPR.G38841 Trifolium pratense HOM05D000002 ORTHO05D000047 1.1e-06 57.0 98 34.7
TWI18G0261 Tripterygium wilfordii HOM05D000002 ORTHO05D000047 1.1e-06 57.0 113 31.9
Manes.11G089878 Manihot esculenta HOM05D000002 ORTHO05D000047 1.4e-06 56.6 100 37.0
Sed0012365 Sechium edule HOM05D000002 ORTHO05D000047 1.4e-06 56.6 99 28.3
Sed0013391 Sechium edule HOM05D000002 ORTHO05D000047 1.4e-06 56.6 115 35.7
Sopen02g027590 Solanum pennellii HOM05D000002 ORTHO05D000001 1.4e-06 56.6 97 27.8
Sopen03g004470 Solanum pennellii HOM05D000002 ORTHO05D000001 1.4e-06 56.6 97 27.8
TPR.G183 Trifolium pratense HOM05D000002 ORTHO05D000047 1.4e-06 56.6 93 32.3
TPR.G5314 Trifolium pratense HOM05D000002 ORTHO05D000047 1.4e-06 56.6 92 30.4
Ca_14308_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 1.8e-06 56.2 127 30.7
Lalb_Chr18g0051001 Lupinus albus HOM05D037110 ORTHO05D000001 1.8e-06 56.2 114 32.5
Sabra16G0122200 Salix brachista HOM05D000002 ORTHO05D000047 1.8e-06 56.2 97 30.9
Sabra16G0131100 Salix brachista HOM05D000002 ORTHO05D000047 1.8e-06 56.2 97 30.9
arahy.Tifrunner.gnm1.ann1.M6ZTL4 Arachis hypogaea HOM05D011450 ORTHO05D011017 2.4e-06 55.8 120 32.5
Gohir.A07G161305 Gossypium hirsutum HOM05D000002 ORTHO05D000047 2.4e-06 55.8 104 31.7
QL12p040299 Quercus lobata HOM05D000002 ORTHO05D000001 2.4e-06 55.8 111 30.6
TPR.G28040 Trifolium pratense HOM05D000002 ORTHO05D000047 2.4e-06 55.8 101 32.7
TPR.G32024 Trifolium pratense HOM05D000002 ORTHO05D000047 3.1e-06 55.5 111 32.4
AUR62036616 Chenopodium quinoa HOM05D000379 ORTHO05D000254 4.1e-06 55.1 108 27.8
Ca_09781_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000047 4.1e-06 55.1 113 34.5
Hma1.2p1_2148F.1_g315110 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 4.1e-06 55.1 103 33.0
Lalb_Chr23g0273741 Lupinus albus HOM05D000002 ORTHO05D000047 4.1e-06 55.1 103 32.0
Manes.04G065401 Manihot esculenta HOM05D000002 ORTHO05D000047 4.1e-06 55.1 50 52.0
Lalb_Chr17g0338211 Lupinus albus HOM05D015690 ORTHO05D000047 5.3e-06 54.7 117 33.3
Rhsim01G0108500 Rhododendron simsii HOM05D000002 ORTHO05D000047 5.3e-06 54.7 125 26.4
Rhsim02G0191000 Rhododendron simsii HOM05D000002 ORTHO05D000047 5.3e-06 54.7 125 26.4
Sopen04g023050 Solanum pennellii HOM05D000002 ORTHO05D000001 5.3e-06 54.7 98 27.6
Manes.16G093766 Manihot esculenta HOM05D000002 ORTHO05D000047 6.9e-06 54.3 37 70.3
Medtr4g461050 Medicago truncatula HOM05D000002 ORTHO05D000047 6.9e-06 54.3 98 32.7
QL04p010711 Quercus lobata HOM05D000002 ORTHO05D000047 9.1e-06 53.9 107 30.8
TPR.G35091 Trifolium pratense HOM05D000002 ORTHO05D000047 9.1e-06 53.9 93 32.3


User provided reference genes

Program Settings