Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.02G198400 Manihot esculenta HOM05D006291 ORTHO05D007669 6.1e-62 240.7 130 100.0
Potri.006G079700 Populus trichocarpa HOM05D006291 ORTHO05D007669 1.2e-54 216.5 130 86.9
Nn8g40626 Nelumbo nucifera HOM05D006291 ORTHO05D007669 2.8e-54 215.3 130 88.5
Gohir.D05G287200 Gossypium hirsutum HOM05D006291 ORTHO05D007669 1.0e-53 213.4 128 86.7
Duzib128G2031 Durio zibethinus HOM05D006291 ORTHO05D007669 1.8e-53 212.6 130 87.7
EL10Ac2g03616 Beta vulgaris HOM05D006291 ORTHO05D007669 3.0e-53 211.8 130 84.6
Actinidia38532 Actinidia chinensis HOM05D006291 ORTHO05D007669 4.0e-53 211.5 128 87.5
Duzib128G1629 Durio zibethinus HOM05D006291 ORTHO05D007669 5.2e-53 211.1 130 86.9
TAR362G0416 Trochodendron aralioides HOM05D006291 ORTHO05D007669 5.2e-53 211.1 130 84.6
Ah.10g032820 Amaranthus hybridus HOM05D006291 ORTHO05D007669 8.9e-53 210.3 130 83.8
AUR62020734 Chenopodium quinoa HOM05D006291 ORTHO05D007669 8.9e-53 210.3 130 84.6
AUR62027977 Chenopodium quinoa HOM05D006291 ORTHO05D007669 8.9e-53 210.3 130 84.6
Actinidia02463 Actinidia chinensis HOM05D006291 ORTHO05D007669 1.2e-52 209.9 128 86.7
Sc23g0004310 Simmondsia chinensis HOM05D006291 ORTHO05D007669 1.2e-52 209.9 128 85.9
COL.COLO4_05650 Corchorus olitorius HOM05D006291 ORTHO05D007669 2.0e-52 209.1 128 86.7
Sabra06G0060300 Salix brachista HOM05D006291 ORTHO05D007669 2.0e-52 209.1 130 84.6
Cc06_g23850 Coffea canephora HOM05D006291 ORTHO05D007669 3.4e-52 208.4 128 85.9
MD13G1231800 Malus domestica HOM05D006291 ORTHO05D007669 3.4e-52 208.4 130 84.6
PGSC0003DMG400013569 Solanum tuberosum HOM05D006291 ORTHO05D007669 3.4e-52 208.4 128 85.2
GSVIVG01032270001 Vitis vinifera HOM05D006291 ORTHO05D007669 3.4e-52 208.4 130 85.4
ECA234G1508 Erigeron canadensis HOM05D006291 ORTHO05D007669 4.4e-52 208.0 130 83.8
HanXRQChr12g0358571 Helianthus annuus HOM05D006291 ORTHO05D007669 5.7e-52 207.6 130 85.4
HanXRQChr10g0309491 Helianthus annuus HOM05D006291 ORTHO05D007669 7.5e-52 207.2 130 84.6
Nitab4.5_0003139g0110 Nicotiana tabacum HOM05D006291 ORTHO05D007669 7.5e-52 207.2 128 85.2
Potri.018G149200 Populus trichocarpa HOM05D006291 ORTHO05D007669 7.5e-52 207.2 130 83.8
RcHm_v2.0_Chr4g0397141 Rosa chinensis HOM05D006291 ORTHO05D007669 7.5e-52 207.2 130 83.1
Prupe.1G063000 Prunus persica HOM05D006291 ORTHO05D007669 1.3e-51 206.5 130 84.6
MSTRG.10473 Avicennia marina HOM05D006291 ORTHO05D007669 1.7e-51 206.1 128 85.2
Rhsim01G0107900 Rhododendron simsii HOM05D006291 ORTHO05D007669 1.7e-51 206.1 127 84.3
Migut.L01922 Erythranthe guttata HOM05D006291 ORTHO05D007669 2.2e-51 205.7 128 84.4
CSS0003994 Camellia sinensis var. sinensis HOM05D006291 ORTHO05D007669 2.8e-51 205.3 128 85.2
CSS0013846 Camellia sinensis var. sinensis HOM05D006291 ORTHO05D007669 2.8e-51 205.3 128 85.2
CiPaw.16G104700 Carya illinoinensis HOM05D006291 ORTHO05D007669 2.8e-51 205.3 130 84.6
Ciclev10009894m.g Citrus clementina HOM05D006291 ORTHO05D007669 3.7e-51 204.9 130 83.1
Solyc07g042620.4 Solanum lycopersicum HOM05D006291 ORTHO05D007669 3.7e-51 204.9 126 84.9
Sopen07g022310 Solanum pennellii HOM05D006291 ORTHO05D007669 3.7e-51 204.9 126 84.9
CAN.G54.10 Capsicum annuum HOM05D006291 ORTHO05D007669 4.9e-51 204.5 128 82.8
MD16G1236600 Malus domestica HOM05D006291 ORTHO05D007669 4.9e-51 204.5 130 83.8
THA.LOC104826574 Tarenaya hassleriana HOM05D006291 ORTHO05D007669 4.9e-51 204.5 128 83.6
Gorai.009G302200 Gossypium raimondii HOM05D006291 ORTHO05D007669 6.3e-51 204.1 130 83.8
SGA_v2.0_scaffold21G09601 Striga asiatica HOM05D006291 ORTHO05D007669 6.3e-51 204.1 128 83.6
FAN07G2657 Fragaria x ananassa HOM05D006291 ORTHO05D007669 8.3e-51 203.8 130 81.5
PGR044G0028 Punica granatum HOM05D006291 ORTHO05D007669 8.3e-51 203.8 130 82.3
Gohir.A05G286200 Gossypium hirsutum HOM05D006291 ORTHO05D007669 1.8e-50 202.6 122 86.1
Zm00001eb240760 Zea mays HOM05D006291 ORTHO05D007669 1.8e-50 202.6 130 78.5
Eucgr.G00957 Eucalyptus grandis HOM05D006291 ORTHO05D007669 2.4e-50 202.2 130 81.5
FvH4_4g05950 Fragaria vesca HOM05D006291 ORTHO05D007669 3.1e-50 201.8 130 80.8
arahy.Tifrunner.gnm1.ann1.8H1PJC Arachis hypogaea HOM05D006291 ORTHO05D007669 4.1e-50 201.4 128 81.2
FAN22G0966 Fragaria x ananassa HOM05D006291 ORTHO05D007669 4.1e-50 201.4 130 80.8
Peaxi162Scf00474g00519 Petunia axillaris HOM05D006291 ORTHO05D007669 5.4e-50 201.1 128 82.0
Aqoxy7G02914 Aquilegia oxysepala HOM05D006291 ORTHO05D007669 7.0e-50 200.7 128 80.5
HPP92_021942 Vanilla planifolia HOM05D006291 ORTHO05D007669 1.2e-49 199.9 130 80.0
Thecc.10G119800 Theobroma cacao HOM05D006291 ORTHO05D007669 1.6e-49 199.5 130 86.2
Carub.0013s0004 Capsella rubella HOM05D006291 ORTHO05D007669 4.5e-49 198.0 128 79.7
PSO170G1648 Papaver somniferum HOM05D006291 ORTHO05D007669 4.5e-49 198.0 128 81.2
CANSAT56G1353 Cannabis sativa HOM05D006291 ORTHO05D007669 5.9e-49 197.6 130 80.8
TWI63G0490 Tripterygium wilfordii HOM05D006291 ORTHO05D007669 7.8e-49 197.2 128 81.2
PSO063G7114 Papaver somniferum HOM05D006291 ORTHO05D007669 1.0e-48 196.8 128 80.5
AT2G07340 Arabidopsis thaliana HOM05D006291 ORTHO05D007669 1.3e-48 196.4 128 79.7
CSS0029803 Camellia sinensis var. sinensis HOM05D006291 ORTHO05D007669 1.3e-48 196.4 134 80.6
HPP92_021968 Vanilla planifolia HOM05D006291 ORTHO05D007669 1.3e-48 196.4 127 79.5
unitig_8.g3543 Utricularia gibba HOM05D006291 ORTHO05D007669 1.7e-48 196.1 126 81.0
VMungo1127G1563 Vigna mungo HOM05D006291 ORTHO05D007669 3.9e-48 194.9 130 77.7
Phvul.011G206700 Phaseolus vulgaris HOM05D006291 ORTHO05D007669 6.6e-48 194.1 130 76.9
CDE02G3570 Ceratophyllum demersum HOM05D006291 ORTHO05D007669 1.1e-47 193.4 125 80.0
arahy.Tifrunner.gnm1.ann1.SCY2K5 Arachis hypogaea HOM05D006291 ORTHO05D007669 1.9e-47 192.6 128 78.9
Glyma.15G235500 Glycine max HOM05D006291 ORTHO05D007669 1.9e-47 192.6 130 76.2
Hund19355 Selenicereus undatus HOM05D006291 ORTHO05D007669 1.9e-47 192.6 122 86.9
CANSAT56G3141 Cannabis sativa HOM05D006291 ORTHO05D007669 2.5e-47 192.2 130 79.2
CDE06G0918 Ceratophyllum demersum HOM05D006291 ORTHO05D007669 2.5e-47 192.2 127 77.2
Glyma.13G197100 Glycine max HOM05D006291 ORTHO05D007669 2.5e-47 192.2 130 76.2
TPR.G27823 Trifolium pratense HOM05D006291 ORTHO05D007669 3.3e-47 191.8 128 76.6
Lalb_Chr01g0007741 Lupinus albus HOM05D006291 ORTHO05D007669 5.6e-47 191.0 128 76.6
Lj3g0009914 Lotus japonicus HOM05D006291 ORTHO05D007669 7.3e-47 190.7 130 75.4
Ca_23954_v3 Cicer arietinum L. HOM05D006291 ORTHO05D007669 1.2e-46 189.9 128 75.8
FAN12G2114 Fragaria x ananassa HOM05D006291 ORTHO05D007669 1.2e-46 189.9 132 77.3
ATR0580G035 Amborella trichopoda HOM05D006291 ORTHO05D007669 2.1e-46 189.1 126 77.8
Oeu028819.1 Olea europaea HOM05D006291 ORTHO05D007669 8.0e-46 187.2 112 89.3
Psat0s418g0040 Pisum sativum HOM05D006291 ORTHO05D007669 1.0e-45 186.8 128 74.2
Sp6g13890 Schrenkiella parvula HOM05D006291 ORTHO05D007669 1.4e-45 186.4 128 78.9
CsaV3_2G009230 Cucumis sativus L. HOM05D006291 ORTHO05D007669 3.1e-45 185.3 119 81.5
CDE06G1428 Ceratophyllum demersum HOM05D006291 ORTHO05D007669 5.2e-45 184.5 127 76.4
Lsat_1_v5_gn_5_80980 Lactuca sativa HOM05D006291 ORTHO05D007669 5.8e-44 181.0 131 78.6
Ca_23960_v3 Cicer arietinum L. HOM05D006291 ORTHO05D007669 1.7e-43 179.5 120 75.8
Sed0008839 Sechium edule HOM05D006291 ORTHO05D007669 1.7e-43 179.5 121 78.5
Thhalv10015026m.g Eutrema salsugineum HOM05D006291 ORTHO05D007669 2.2e-43 179.1 128 75.8
Aa31LG8G11030 Aethionema arabicum HOM05D006291 ORTHO05D007669 1.1e-42 176.8 171 59.6
BcaB01g04158 Brassica carinata HOM05D006291 ORTHO05D007669 2.4e-42 175.6 136 69.9
Dinv26485 Davidia involucrata HOM05D006291 ORTHO05D007669 1.2e-41 173.3 125 77.6
A03p16050 Brassica napus HOM05D006291 ORTHO05D007669 3.5e-41 171.8 128 73.4
MELO3C003910.2 Cucumis melo HOM05D006291 ORTHO05D007669 4.6e-41 171.4 119 76.5
BcaC01g06135 Brassica carinata HOM05D006291 ORTHO05D007669 6.0e-41 171.0 128 72.7
C03p18890 Brassica napus HOM05D006291 ORTHO05D007669 6.0e-41 171.0 128 72.7
DCAR_020455 Daucus carota HOM05D006291 ORTHO05D007669 1.7e-40 169.5 103 87.4
MBI16_g09344_MAGBIO Magnolia biondii HOM05D006291 ORTHO05D007669 1.8e-37 159.5 185 54.6
Actinidia02472 Actinidia chinensis HOM05D006291 ORTHO05D007669 3.4e-36 155.2 104 78.8
AL3G44130 Arabidopsis lyrata HOM05D006291 ORTHO05D007669 4.4e-36 154.8 98 80.6
TWI32G0019 Tripterygium wilfordii HOM05D006291 ORTHO05D007669 4.4e-36 154.8 116 72.4
Medtr8g039140 Medicago truncatula HOM05D006291 ORTHO05D007669 5.8e-36 154.5 103 74.8
Pp3c19_4350 Physcomitrium patens HOM05D006291 ORTHO05D007669 3.7e-35 151.8 128 60.2
Atru.BG.15.p Acer truncatum HOM05D006291 ORTHO05D007669 6.4e-35 151.0 101 81.2
Mapoly0027s0144 Marchantia polymorpha HOM05D006291 ORTHO05D007669 1.4e-34 149.8 128 60.9
Nitab4.5_0000170g0080 Nicotiana tabacum HOM05D006291 ORTHO05D007669 7.0e-34 147.5 96 80.2
Dinv12620 Davidia involucrata HOM05D006291 ORTHO05D007669 1.1e-31 140.2 92 81.5
BcaC04g20645 Brassica carinata HOM05D006291 ORTHO05D007669 2.0e-28 129.4 92 75.0
SMO200G0161 Selaginella moellendorffii HOM05D006291 ORTHO05D007669 2.6e-28 129.0 120 55.8
BraA03t10896Z Brassica rapa HOM05D006291 ORTHO05D007669 1.6e-25 119.8 94 70.2
BolC9t56988H Brassica oleracea HOM05D006291 ORTHO05D007669 2.1e-25 119.4 92 71.7
AagrBONN_evm.TU.Sc2ySwM_362.1895 Anthoceros agrestis HOM05D006291 ORTHO05D007669 1.3e-24 116.7 99 55.6
C09p41100 Brassica napus HOM05D006291 ORTHO05D007669 1.3e-24 116.7 93 69.9
Nitab4.5_0002603g0030 Nicotiana tabacum HOM05D006291 ORTHO05D007669 1.9e-23 112.8 72 80.6
SalBow3G3584 Salvia bowleyana HOM05D006291 ORTHO05D007669 1.9e-23 112.8 105 63.8
Actinidia07563 Actinidia chinensis HOM05D006291 ORTHO05D007669 1.2e-22 110.2 66 87.9
Os02g0462900 Oryza sativa ssp. japonica HOM05D006291 ORTHO05D007669 9.9e-20 100.5 63 76.2
CARHR104040 Cardamine hirsuta HOM05D006291 ORTHO05D007669 2.2e-19 99.4 62 82.3
BcaB08g35517 Brassica carinata HOM05D006291 ORTHO05D007669 4.2e-18 95.1 64 76.6
BolC3t14280H Brassica oleracea HOM05D006291 ORTHO05D007669 5.4e-18 94.7 62 77.4
BolC3t14281H Brassica oleracea HOM05D006291 ORTHO05D007669 2.1e-17 92.8 64 75.0
Cpa.g.sc91.61 Carica papaya HOM05D006291 ORTHO05D007669 2.7e-17 92.4 57 87.7
ClCG11G011210 Citrullus lanatus HOM05D006291 ORTHO05D007669 1.0e-16 90.5 62 74.2
SEGI_05817 Sequoiadendron giganteum HOM05D006291 ORTHO05D007669 1.1e-15 87.0 62 69.4
PRCOL_00006384 Prasinoderma coloniale HOM05D006291 ORTHO05D007669 4.0e-13 78.6 117 35.0
MCO11G208 Micromonas commoda HOM05D006291 ORTHO05D007669 2.4e-10 69.3 115 33.9
Haze_19088 Corylus avellana HOM05D000287 ORTHO05D000319 2.1e-09 66.2 42 81.0
vmacro20755 Vaccinium macrocarpon HOM05D006291 ORTHO05D007669 2.1e-09 66.2 40 85.0
CBR_g16047 Chara braunii HOM05D006291 ORTHO05D007669 7.8e-09 64.3 61 52.5


User provided reference genes

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