Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.02G195900 Manihot esculenta HOM05D006738 ORTHO05D008191 4.7e-63 244.6 143 100.0
Potri.019G076400 Populus trichocarpa HOM05D006738 ORTHO05D008191 4.7e-47 191.4 143 82.5
Sabra19G0086800 Salix brachista HOM05D006738 ORTHO05D008191 8.0e-47 190.7 143 81.8
Cpa.g.sc21.54 Carica papaya HOM05D006738 ORTHO05D008191 1.4e-46 189.9 139 82.7
Thecc.08G171800 Theobroma cacao HOM05D006738 ORTHO05D008191 2.0e-45 186.0 143 79.0
Eucgr.F02960 Eucalyptus grandis HOM05D006738 ORTHO05D008191 4.4e-45 184.9 143 79.0
Gohir.A05G252100 Gossypium hirsutum HOM05D006738 ORTHO05D008191 1.3e-44 183.3 143 79.0
Ciclev10022763m.g Citrus clementina HOM05D006738 ORTHO05D008191 2.2e-44 182.6 144 79.9
PGR042G2463 Punica granatum HOM05D006738 ORTHO05D008191 2.2e-44 182.6 143 79.0
TWI14G1101 Tripterygium wilfordii HOM05D006738 ORTHO05D008191 2.2e-44 182.6 142 75.4
Gohir.D05G253900 Gossypium hirsutum HOM05D006738 ORTHO05D008191 2.8e-44 182.2 143 78.3
Duzib211G0443 Durio zibethinus HOM05D006738 ORTHO05D008191 3.7e-44 181.8 143 79.0
COL.COLO4_24620 Corchorus olitorius HOM05D006738 ORTHO05D008191 6.3e-44 181.0 143 77.6
Atru.chr12.822 Acer truncatum HOM05D006738 ORTHO05D008191 5.4e-43 177.9 143 75.5
THA.LOC104815902 Tarenaya hassleriana HOM05D006738 ORTHO05D008191 2.0e-42 176.0 143 77.6
GSVIVG01025906001 Vitis vinifera HOM05D006738 ORTHO05D008191 4.5e-42 174.9 144 76.4
Nitab4.5_0006564g0050 Nicotiana tabacum HOM05D006738 ORTHO05D008191 1.3e-41 173.3 143 65.0
Dinv41794 Davidia involucrata HOM05D006738 ORTHO05D008191 1.7e-41 172.9 147 77.6
Solyc06g064810.3 Solanum lycopersicum HOM05D006738 ORTHO05D008191 2.9e-41 172.2 143 64.3
Sopen06g023320 Solanum pennellii HOM05D006738 ORTHO05D008191 2.9e-41 172.2 143 64.3
ECA234G1792 Erigeron canadensis HOM05D006738 ORTHO05D008191 5.0e-41 171.4 143 62.2
HPP92_002035 Vanilla planifolia HOM05D006738 ORTHO05D008191 5.0e-41 171.4 139 76.3
PGSC0003DMG400005175 Solanum tuberosum HOM05D006738 ORTHO05D008191 8.6e-41 170.6 143 63.6
MD08G1215600 Malus domestica HOM05D006738 ORTHO05D008191 1.1e-40 170.2 143 75.5
MD15G1400100 Malus domestica HOM05D006738 ORTHO05D008191 1.5e-40 169.9 143 75.5
Prupe.1G547300 Prunus persica HOM05D006738 ORTHO05D008191 1.9e-40 169.5 144 74.3
Lsat_1_v5_gn_5_78501 Lactuca sativa HOM05D006738 ORTHO05D008191 2.5e-40 169.1 141 62.4
CiPaw.03G017200 Carya illinoinensis HOM05D006738 ORTHO05D008191 4.2e-40 168.3 144 74.3
Sc20g0004710 Simmondsia chinensis HOM05D006738 ORTHO05D008191 9.5e-40 167.2 143 65.0
arahy.Tifrunner.gnm1.ann1.WI646Q Arachis hypogaea HOM05D006738 ORTHO05D008191 2.8e-39 165.6 142 61.3
CSS0018644 Camellia sinensis var. sinensis HOM05D006738 ORTHO05D008191 4.7e-39 164.9 146 64.4
CSS0019392 Camellia sinensis var. sinensis HOM05D006738 ORTHO05D008191 4.7e-39 164.9 146 64.4
Oeu048220.2 Olea europaea HOM05D006738 ORTHO05D008191 4.7e-39 164.9 143 73.4
arahy.Tifrunner.gnm1.ann1.67ZQRX Arachis hypogaea HOM05D006738 ORTHO05D008191 8.0e-39 164.1 142 61.3
BolC6t36356H Brassica oleracea HOM05D006738 ORTHO05D008191 1.0e-38 163.7 143 64.3
AUR62032974 Chenopodium quinoa HOM05D006738 ORTHO05D008191 1.0e-38 163.7 144 72.9
C06p12150 Brassica napus HOM05D006738 ORTHO05D008191 1.4e-38 163.3 143 64.3
Cc10_g09240 Coffea canephora HOM05D006738 ORTHO05D008191 1.4e-38 163.3 140 73.6
AL1G48260 Arabidopsis lyrata HOM05D006738 ORTHO05D008191 1.8e-38 162.9 143 62.9
MELO3C022198.2 Cucumis melo HOM05D006738 ORTHO05D008191 1.8e-38 162.9 143 71.3
Migut.C01346 Erythranthe guttata HOM05D006738 ORTHO05D008191 1.8e-38 162.9 143 60.8
Sed0003815 Sechium edule HOM05D006738 ORTHO05D008191 1.8e-38 162.9 143 69.2
BcaC08g43833 Brassica carinata HOM05D006738 ORTHO05D008191 2.3e-38 162.5 143 64.3
A09p32610 Brassica napus HOM05D006738 ORTHO05D008191 2.3e-38 162.5 143 64.3
BraA09t38801Z Brassica rapa HOM05D006738 ORTHO05D008191 2.3e-38 162.5 143 64.3
QL09p002987 Quercus lobata HOM05D006738 ORTHO05D008191 2.3e-38 162.5 144 60.4
QL09p004200 Quercus lobata HOM05D006738 ORTHO05D008191 3.0e-38 162.2 144 70.8
CiPaw.04G011300 Carya illinoinensis HOM05D006738 ORTHO05D008191 4.0e-38 161.8 144 71.5
Nn5g27492 Nelumbo nucifera HOM05D006738 ORTHO05D008191 5.2e-38 161.4 143 75.5
AUR62017706 Chenopodium quinoa HOM05D006738 ORTHO05D008191 6.8e-38 161.0 138 74.6
QL09p004074 Quercus lobata HOM05D006738 ORTHO05D008191 8.9e-38 160.6 144 70.8
CARHR033210 Cardamine hirsuta HOM05D006738 ORTHO05D008191 1.2e-37 160.2 143 72.0
Carub.0001s3198 Capsella rubella HOM05D006738 ORTHO05D008191 2.0e-37 159.5 143 74.1
arahy.Tifrunner.gnm1.ann1.H480WY Arachis hypogaea HOM05D006738 ORTHO05D008191 3.4e-37 158.7 138 60.1
FvH4_5g25840 Fragaria vesca HOM05D006738 ORTHO05D008191 3.4e-37 158.7 145 59.3
FAN18G1689 Fragaria x ananassa HOM05D006738 ORTHO05D008191 3.4e-37 158.7 145 59.3
Sp1g29140 Schrenkiella parvula HOM05D006738 ORTHO05D008191 3.4e-37 158.7 139 72.7
CsaV3_5G040220 Cucumis sativus L. HOM05D006738 ORTHO05D008191 4.4e-37 158.3 143 65.0
FAN04G1736 Fragaria x ananassa HOM05D006738 ORTHO05D008191 4.4e-37 158.3 144 59.7
FAN08G0599 Fragaria x ananassa HOM05D006738 ORTHO05D008191 4.4e-37 158.3 145 59.3
RcHm_v2.0_Chr7g0216321 Rosa chinensis HOM05D006738 ORTHO05D008191 4.4e-37 158.3 144 60.4
SGA_v2.0_scaffold24G10619 Striga asiatica HOM05D006738 ORTHO05D008191 4.4e-37 158.3 142 71.1
AT1G33810 Arabidopsis thaliana HOM05D006738 ORTHO05D008191 5.7e-37 157.9 143 61.5
BcaB07g33015 Brassica carinata HOM05D006738 ORTHO05D008191 7.5e-37 157.5 143 72.0
CANSAT11G1518 Cannabis sativa HOM05D006738 ORTHO05D008191 1.7e-36 156.4 144 70.1
Lj3g0020973 Lotus japonicus HOM05D006738 ORTHO05D008191 1.7e-36 156.4 141 58.2
Thhalv10009075m.g Eutrema salsugineum HOM05D006738 ORTHO05D008191 2.2e-36 156.0 143 72.7
Medtr4g031650 Medicago truncatula HOM05D006738 ORTHO05D008191 3.7e-36 155.2 143 67.1
PSO170G3684 Papaver somniferum HOM05D006738 ORTHO05D008191 4.9e-36 154.8 139 71.2
TPR.G34128 Trifolium pratense HOM05D006738 ORTHO05D008191 6.3e-36 154.5 143 65.7
EL10Ac9g22957 Beta vulgaris HOM05D006738 ORTHO05D008191 8.3e-36 154.1 143 60.1
Aa31LG6G8130 Aethionema arabicum HOM05D000065 ORTHO05D000162 1.1e-35 153.7 136 69.9
unitig_748.g7730 Utricularia gibba HOM05D000331 ORTHO05D003399 1.4e-35 153.3 144 61.1
Phvul.002G133500 Phaseolus vulgaris HOM05D006738 ORTHO05D008191 1.8e-35 152.9 141 67.4
Psat0s2394g0120 Pisum sativum HOM05D006738 ORTHO05D008191 1.8e-35 152.9 141 66.7
CDE05G2754 Ceratophyllum demersum HOM05D006738 ORTHO05D008191 3.1e-35 152.1 139 64.0
VMungo1215G3331 Vigna mungo HOM05D006738 ORTHO05D008191 4.1e-35 151.8 141 58.2
Ah.01g012440 Amaranthus hybridus HOM05D006738 ORTHO05D008191 5.4e-35 151.4 141 58.2
PSO782G5196 Papaver somniferum HOM05D006738 ORTHO05D008191 5.4e-35 151.4 139 71.2
DCAR_002119 Daucus carota HOM05D006738 ORTHO05D008191 7.0e-35 151.0 146 62.3
Haze_13918 Corylus avellana HOM05D006738 ORTHO05D008191 1.2e-34 150.2 146 57.5
ATR1089G071 Amborella trichopoda HOM05D006738 ORTHO05D008191 2.7e-34 149.1 139 71.9
Lalb_Chr01g0000011 Lupinus albus HOM05D006738 ORTHO05D008191 2.7e-34 149.1 139 67.6
Aqoxy6G00074 Aquilegia oxysepala HOM05D006738 ORTHO05D008191 3.5e-34 148.7 144 54.2
Glyma.01G010600 Glycine max HOM05D006738 ORTHO05D008191 4.5e-34 148.3 141 67.4
Lj2A790G37 Lonicera japonica HOM05D006738 ORTHO05D008191 7.3e-32 141.0 115 68.7
Gorai.009G265500 Gossypium raimondii HOM05D006738 ORTHO05D008191 2.8e-31 139.0 118 75.4
Rhsim07G0068100 Rhododendron simsii HOM05D006738 ORTHO05D008191 8.9e-30 134.0 155 51.0
Os08g0112600 Oryza sativa ssp. japonica HOM05D006738 ORTHO05D008191 7.5e-29 131.0 145 51.7
Actinidia29399 Actinidia chinensis HOM05D006738 ORTHO05D008191 2.9e-28 129.0 114 76.3
Peaxi162Scf00269g01621 Petunia axillaris HOM05D006738 ORTHO05D008191 3.7e-28 128.6 143 54.5
vmacro13762 Vaccinium macrocarpon HOM05D006738 ORTHO05D008191 1.5e-24 116.7 135 51.9
MBI03_g14516_MAGBIO Magnolia biondii HOM05D006738 ORTHO05D008191 2.5e-24 115.9 102 77.5
QL09p000479 Quercus lobata HOM05D006738 ORTHO05D008191 2.8e-23 112.5 120 53.3
QL09p000618 Quercus lobata HOM05D006738 ORTHO05D008191 1.8e-22 109.8 97 60.8
CiPaw.09G026000 Carya illinoinensis HOM05D006738 ORTHO05D008191 1.5e-21 106.7 143 46.2
Cfa008114 Carpinus fangiana HOM05D006738 ORTHO05D008191 7.5e-21 104.4 143 44.8
SEGI_33861 Sequoiadendron giganteum HOM05D006738 ORTHO05D008191 8.3e-20 100.9 119 61.3
QL09p000342 Quercus lobata HOM05D006738 ORTHO05D008191 7.0e-19 97.8 147 46.3
Zm00001eb260580 Zea mays HOM05D006738 ORTHO05D008191 4.6e-18 95.1 129 55.0
AagrBONN_evm.TU.Sc2ySwM_228.5134 Anthoceros agrestis HOM05D006738 ORTHO05D008191 6.0e-18 94.7 126 38.1
SMO118G0306 Selaginella moellendorffii HOM05D006738 ORTHO05D008191 6.0e-18 94.7 142 41.5
FAN13G2380 Fragaria x ananassa HOM05D006738 ORTHO05D008191 7.8e-18 94.4 143 42.7
HanXRQChr10g0309751 Helianthus annuus HOM05D006738 ORTHO05D008191 1.0e-17 94.0 80 63.8
Mapoly0047s0047 Marchantia polymorpha HOM05D006738 ORTHO05D008191 1.7e-17 93.2 121 42.1
Cc10_g16410 Coffea canephora HOM05D006738 ORTHO05D008191 1.5e-16 90.1 77 59.7
ClCG08G000640 Citrullus lanatus HOM05D006738 ORTHO05D008191 1.9e-16 89.7 80 61.2
SHI08988 Sapria himalayana HOM05D006738 ORTHO05D008191 2.5e-16 89.4 80 53.8
Pp3c3_5650 Physcomitrium patens HOM05D006738 ORTHO05D008191 4.3e-16 88.6 130 38.5
Oeu017736.2 Olea europaea HOM05D006738 ORTHO05D008191 1.4e-14 83.6 92 51.1
Medtr4g031845 Medicago truncatula HOM05D006738 ORTHO05D008191 7.5e-13 77.8 72 54.2
Zm00001eb236960 Zea mays HOM05D002538 ORTHO05D008191 2.2e-12 76.3 92 45.7
Hma1.2p1_0935F.1_g238670 Hydrangea macrophylla HOM05D006738 ORTHO05D008191 8.3e-12 74.3 45 75.6
Glyma.09G210500 Glycine max HOM05D006738 ORTHO05D008191 6.0e-10 68.2 78 48.7
QL09p003020 Quercus lobata HOM05D006738 ORTHO05D008191 6.0e-10 68.2 70 52.9


User provided reference genes

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