Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.02G191950 Manihot esculenta HOM05D009258 ORTHO05D009356 1.1e-68 263.1 121 100.0
Manes.06G033475 Manihot esculenta HOM05D009258 ORTHO05D001516 7.5e-30 134.0 112 56.2
TPR.G25363 Trifolium pratense HOM05D007807 ORTHO05D001516 2.0e-14 82.8 98 39.8
Psat4g086840 Pisum sativum HOM05D007807 ORTHO05D001516 9.2e-12 73.9 89 34.8
Rhsim07G0052100 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.2e-11 73.6 97 37.1
TPR.G18402 Trifolium pratense HOM05D002777 ORTHO05D001516 2.7e-11 72.4 98 35.7
Psat0s287g0120 Pisum sativum HOM05D007807 ORTHO05D001516 4.6e-11 71.6 89 36.0
Rhsim02G0045800 Rhododendron simsii HOM05D008219 ORTHO05D009356 6.0e-11 71.2 103 33.0
vmacro01896 Vaccinium macrocarpon HOM05D008219 ORTHO05D009356 7.8e-11 70.9 101 33.7
COL.COLO4_27331 Corchorus olitorius HOM05D009258 ORTHO05D009583 1.7e-10 69.7 97 34.0
Psat2g179480 Pisum sativum HOM05D016635 ORTHO05D001516 3.0e-10 68.9 86 31.4
Rhsim07G0230400 Rhododendron simsii HOM05D008219 ORTHO05D009356 5.1e-10 68.2 103 33.0
COL.COLO4_25415 Corchorus olitorius HOM05D009258 ORTHO05D009583 6.6e-10 67.8 85 35.3
EL10Ac7g17991 Beta vulgaris HOM05D008976 ORTHO05D011121 3.3e-09 65.5 89 36.0
Lj6g0012162 Lotus japonicus HOM05D002777 ORTHO05D001516 5.6e-09 64.7 108 34.3
Psat1g199520 Pisum sativum HOM05D007807 ORTHO05D001516 2.1e-08 62.8 100 30.0
Psat4g004920 Pisum sativum HOM05D007807 ORTHO05D001516 2.8e-08 62.4 100 30.0
Lj1g0011765 Lotus japonicus HOM05D008220 ORTHO05D010358 4.7e-08 61.6 95 33.7
Lj2g0009989 Lotus japonicus HOM05D008220 ORTHO05D010358 4.7e-08 61.6 100 34.0
vmacro06592 Vaccinium macrocarpon HOM05D000211 ORTHO05D002285 4.7e-08 61.6 94 31.9
EL10Ac7g16632 Beta vulgaris HOM05D008976 ORTHO05D011121 8.1e-08 60.8 89 34.8
Psat1g119760 Pisum sativum HOM05D007807 ORTHO05D001516 1.4e-07 60.1 89 33.7
vmacro21908 Vaccinium macrocarpon HOM05D008219 ORTHO05D009356 1.4e-07 60.1 89 37.1
CSS0042161 Camellia sinensis var. sinensis HOM05D012808 ORTHO05D011705 1.8e-07 59.7 95 33.7
COL.COLO4_36343 Corchorus olitorius HOM05D009258 ORTHO05D009583 3.1e-07 58.9 85 32.9
vmacro21269 Vaccinium macrocarpon HOM05D005003 ORTHO05D006220 3.1e-07 58.9 91 35.2
Rhsim08G0091100 Rhododendron simsii HOM05D008219 ORTHO05D009356 4.0e-07 58.5 83 33.7
Lj6g0001957 Lotus japonicus HOM05D002777 ORTHO05D000006 5.2e-07 58.2 95 27.4
CSS0025340 Camellia sinensis var. sinensis HOM05D012808 ORTHO05D011705 6.8e-07 57.8 97 32.0
Lj2g0022307 Lotus japonicus HOM05D008220 ORTHO05D010358 6.8e-07 57.8 97 32.0
LjContig00081g0007509 Lotus japonicus HOM05D002777 ORTHO05D001516 6.8e-07 57.8 94 29.8
Phvul.010G135050 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 6.8e-07 57.8 99 30.3
CSS0000615 Camellia sinensis var. sinensis HOM05D012808 ORTHO05D011705 8.9e-07 57.4 95 32.6
Lj5g0002610 Lotus japonicus HOM05D008220 ORTHO05D010358 8.9e-07 57.4 84 34.5
Lj2g0018575 Lotus japonicus HOM05D002777 ORTHO05D001516 1.2e-06 57.0 107 30.8
Psat3g174320 Pisum sativum HOM05D007807 ORTHO05D001516 1.5e-06 56.6 89 30.3
Lj1g0009767 Lotus japonicus HOM05D030494 ORTHO05D010358 2.0e-06 56.2 97 28.9
Sc03g0004450 Simmondsia chinensis HOM05D009209 ORTHO05D011705 2.0e-06 56.2 78 32.1
Lj2g0007640 Lotus japonicus HOM05D002777 ORTHO05D001516 2.6e-06 55.8 88 29.5
Psat0s911g0160 Pisum sativum HOM05D007807 ORTHO05D001516 3.4e-06 55.5 64 31.2
Thecc.07G112000 Theobroma cacao HOM05D009258 ORTHO05D009583 3.4e-06 55.5 102 29.4
EL10Ac9g21786 Beta vulgaris HOM05D008976 ORTHO05D011121 5.8e-06 54.7 90 36.7
COL.COLO4_11272 Corchorus olitorius HOM05D008263 ORTHO05D009583 5.8e-06 54.7 90 34.4
Phvul.010G078700 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 5.8e-06 54.7 89 29.2
Lj2g0018386 Lotus japonicus HOM05D002777 ORTHO05D001516 9.9e-06 53.9 105 26.7
Lalb_Chr23g0273581 Lupinus albus HOM05D002777 ORTHO05D001516 9.9e-06 53.9 89 30.3
Thecc.03G167900 Theobroma cacao HOM05D009258 ORTHO05D009583 9.9e-06 53.9 90 30.0


User provided reference genes

Program Settings