Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.02G191100 Manihot esculenta HOM05D007935 ORTHO05D007393 4.4e-121 438.0 221 100.0
Manes.18G100400 Manihot esculenta HOM05D007935 ORTHO05D007393 4.7e-54 215.3 210 64.3
Potri.013G114000 Populus trichocarpa HOM05D007935 ORTHO05D007393 1.7e-32 143.7 213 47.9
Sabra13G0096500 Salix brachista HOM05D007935 ORTHO05D007393 7.3e-31 138.3 210 46.7
Potri.019G084500 Populus trichocarpa HOM05D007935 ORTHO05D007393 1.7e-27 127.1 191 49.2
Sabra19G0095700 Salix brachista HOM05D007935 ORTHO05D007393 2.0e-25 120.2 214 41.6
QL02p034017 Quercus lobata HOM05D007935 ORTHO05D007393 7.8e-25 118.2 188 47.3
Cfa018195 Carpinus fangiana HOM05D007935 ORTHO05D007393 5.0e-24 115.5 185 48.6
Thecc.08G181700 Theobroma cacao HOM05D007935 ORTHO05D007393 3.3e-23 112.8 177 46.3
Cpa.g.sc66.51 Carica papaya HOM05D007935 ORTHO05D007393 9.5e-23 111.3 178 46.6
Duzib177G0305 Durio zibethinus HOM05D007935 ORTHO05D007393 2.1e-22 110.2 199 42.7
Gorai.006G131900 Gossypium raimondii HOM05D007935 ORTHO05D007393 5.8e-20 102.1 185 44.3
Gohir.A09G117400 Gossypium hirsutum HOM05D007935 ORTHO05D007393 1.7e-19 100.5 187 43.3
COL.COLO4_16292 Corchorus olitorius HOM05D007935 ORTHO05D007393 2.9e-19 99.8 178 41.0
Gohir.D09G114200 Gossypium hirsutum HOM05D007935 ORTHO05D007393 4.9e-19 99.0 185 43.8
TAR628G0171 Trochodendron aralioides HOM05D007935 ORTHO05D007393 5.4e-18 95.5 187 40.6
Haze_17920 Corylus avellana HOM05D007935 ORTHO05D007393 1.0e-16 91.3 170 44.7
Dinv08012 Davidia involucrata HOM05D007935 ORTHO05D007393 1.0e-16 91.3 177 42.4
TAR376G0933 Trochodendron aralioides HOM05D007935 ORTHO05D007393 3.9e-16 89.4 183 38.3
Atru.chr13.1798 Acer truncatum HOM05D007935 ORTHO05D007393 1.1e-15 87.8 202 38.1
Phvul.004G084000 Phaseolus vulgaris HOM05D007935 ORTHO05D007393 1.5e-15 87.4 178 40.4
Glyma.02G074300 Glycine max HOM05D007935 ORTHO05D007393 2.5e-15 86.7 178 37.1
Lalb_Chr01g0010021 Lupinus albus HOM05D007935 ORTHO05D007393 2.5e-15 86.7 193 39.9
Lj2g0007380 Lotus japonicus HOM05D007935 ORTHO05D007393 4.3e-15 85.9 192 34.9
FvH4_4g19940 Fragaria vesca HOM05D007935 ORTHO05D007393 1.2e-14 84.3 180 37.8
TWI32G0406 Tripterygium wilfordii HOM05D007935 ORTHO05D007393 2.1e-14 83.6 183 39.9
FAN12G0476 Fragaria x ananassa HOM05D007935 ORTHO05D007393 3.6e-14 82.8 188 38.3
CiPaw.16G062200 Carya illinoinensis HOM05D007935 ORTHO05D007393 4.7e-14 82.4 178 39.9
Glyma.16G156000 Glycine max HOM05D007935 ORTHO05D007393 6.2e-14 82.0 176 35.2
Rhsim06G0096700 Rhododendron simsii HOM05D007935 ORTHO05D007393 6.2e-14 82.0 212 34.9
FAN07G1822 Fragaria x ananassa HOM05D007935 ORTHO05D007393 1.8e-13 80.5 189 34.9
Prupe.8G056300 Prunus persica HOM05D007935 ORTHO05D007393 3.1e-13 79.7 180 38.3
TPR.G39557 Trifolium pratense HOM05D007935 ORTHO05D007393 8.9e-13 78.2 175 36.0
Dinv41698 Davidia involucrata HOM05D007935 ORTHO05D007393 1.2e-12 77.8 112 48.2
Lalb_Chr19g0129781 Lupinus albus HOM05D007935 ORTHO05D007393 1.5e-12 77.4 170 41.2
Glyma.10G215500 Glycine max HOM05D007935 ORTHO05D007393 4.4e-12 75.9 176 37.5
CiPaw.15G082200 Carya illinoinensis HOM05D007935 ORTHO05D007393 5.8e-12 75.5 186 39.2
Nn5g27748 Nelumbo nucifera HOM05D007935 ORTHO05D007393 2.2e-11 73.6 186 34.9
CiPaw.15G082300 Carya illinoinensis HOM05D007935 ORTHO05D007393 4.9e-11 72.4 185 38.9
Ciclev10003091m.g Citrus clementina HOM05D007935 ORTHO05D007393 4.9e-11 72.4 165 40.6
Glyma.20G176200 Glycine max HOM05D007935 ORTHO05D007393 6.4e-11 72.0 176 36.4
Nn1g08393 Nelumbo nucifera HOM05D007935 ORTHO05D007393 1.1e-10 71.2 182 33.5
PGSC0003DMG400009223 Solanum tuberosum HOM05D007935 ORTHO05D007393 1.4e-10 70.9 176 33.0
Medtr1g096290 Medicago truncatula HOM05D007935 ORTHO05D007393 3.2e-10 69.7 174 35.6
Solyc11g017390.2 Solanum lycopersicum HOM05D007935 ORTHO05D007393 3.2e-10 69.7 175 32.6
Nitab4.5_0000560g0100 Nicotiana tabacum HOM05D007935 ORTHO05D007393 4.1e-10 69.3 189 33.3
RcHm_v2.0_Chr6g0272051 Rosa chinensis HOM05D007935 ORTHO05D007393 4.1e-10 69.3 175 35.4
arahy.Tifrunner.gnm1.ann1.B1B3Q7 Arachis hypogaea HOM05D007935 ORTHO05D007393 7.1e-10 68.6 176 35.2
CSS0018652 Camellia sinensis var. sinensis HOM05D007935 ORTHO05D007393 7.1e-10 68.6 198 35.4
Eucgr.F04128 Eucalyptus grandis HOM05D007935 ORTHO05D007393 9.2e-10 68.2 183 33.3
AUR62004654 Chenopodium quinoa HOM05D007935 ORTHO05D007393 1.2e-09 67.8 186 36.6
ClCG09G010460 Citrullus lanatus HOM05D029613 ORTHO05D007393 1.6e-09 67.4 187 35.3
PGR102G0669 Punica granatum HOM05D007935 ORTHO05D007393 4.6e-09 65.9 185 35.7
arahy.Tifrunner.gnm1.ann1.QZIQ5C Arachis hypogaea HOM05D007935 ORTHO05D007393 7.8e-09 65.1 176 34.7
Sc23g0001170 Simmondsia chinensis HOM05D007935 ORTHO05D007393 7.8e-09 65.1 113 42.5
COL.COLO4_33532 Corchorus olitorius HOM05D009958 ORTHO05D007393 3.0e-08 63.2 115 40.0
Sed0011111 Sechium edule HOM05D029613 ORTHO05D007393 8.6e-08 61.6 186 33.9
FAN24G0793 Fragaria x ananassa HOM05D007935 ORTHO05D007393 1.9e-07 60.5 103 44.7
arahy.Tifrunner.gnm1.ann1.DLN685 Arachis hypogaea HOM05D007935 ORTHO05D007393 2.5e-07 60.1 172 35.5
Hma1.2p1_0363F.1_g136610 Hydrangea macrophylla HOM05D007935 ORTHO05D007393 2.5e-07 60.1 176 35.2
Oeu039600.1 Olea europaea HOM05D007935 ORTHO05D007393 4.3e-07 59.3 171 31.6
VMungo0464G1609 Vigna mungo HOM05D007935 ORTHO05D007393 4.3e-07 59.3 179 31.8
AT1G71910 Arabidopsis thaliana HOM05D010479 ORTHO05D007393 9.6e-07 58.2 182 34.1
Psat6g186560 Pisum sativum HOM05D007935 ORTHO05D007393 9.6e-07 58.2 175 33.7
Nitab4.5_0000422g0110 Nicotiana tabacum HOM05D007935 ORTHO05D007393 1.2e-06 57.8 209 30.6
SalBow7G1894 Salvia bowleyana HOM05D007935 ORTHO05D007393 1.2e-06 57.8 171 33.9
Sopen11g009330 Solanum pennellii HOM05D007935 ORTHO05D007393 2.1e-06 57.0 176 29.5
CARHR064730 Cardamine hirsuta HOM05D010479 ORTHO05D007393 2.8e-06 56.6 186 32.8
CsaV3_2G033460 Cucumis sativus L. HOM05D030816 ORTHO05D028878 3.6e-06 56.2 178 33.7
AL106U10030 Arabidopsis lyrata HOM05D010479 ORTHO05D007393 4.7e-06 55.8 108 39.8
AL2G31520 Arabidopsis lyrata HOM05D010479 ORTHO05D007393 6.2e-06 55.5 184 33.2
Sp5g26980 Schrenkiella parvula HOM05D010479 ORTHO05D007393 6.2e-06 55.5 183 35.5
Manes.12G081400 Manihot esculenta HOM05D009958 ORTHO05D007393 8.1e-06 55.1 178 34.3


User provided reference genes

Program Settings