Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.02G188000 Manihot esculenta HOM05D003913 ORTHO05D004803 6.7e-128 461.5 395 100.0
Dinv13071 Davidia involucrata HOM05D003913 ORTHO05D004803 2.0e-92 343.6 395 64.1
Potri.019G087200 Populus trichocarpa HOM05D003913 ORTHO05D004803 7.7e-92 341.7 396 85.1
Dinv44716 Davidia involucrata HOM05D003913 ORTHO05D004803 1.6e-89 334.0 395 64.8
PGR031G2719 Punica granatum HOM05D003913 ORTHO05D004803 2.7e-84 316.6 395 82.0
Prupe.8G049100 Prunus persica HOM05D003913 ORTHO05D004803 4.5e-84 315.8 394 81.2
CsaV3_6G002750 Cucumis sativus L. HOM05D003913 ORTHO05D004803 8.6e-83 311.6 395 80.0
MELO3C024997.2 Cucumis melo HOM05D003913 ORTHO05D004803 7.3e-82 308.5 395 79.7
ClCG08G002560 Citrullus lanatus HOM05D003913 ORTHO05D004803 4.7e-81 305.8 395 79.5
Sed0004416 Sechium edule HOM05D003913 ORTHO05D004803 4.7e-81 305.8 395 80.3
Ciclev10008663m.g Citrus clementina HOM05D003913 ORTHO05D004803 1.0e-80 304.7 395 79.2
Sed0012824 Sechium edule HOM05D003913 ORTHO05D004803 1.0e-80 304.7 395 71.6
Lj5g0008809 Lotus japonicus HOM05D003913 ORTHO05D004803 1.8e-80 303.9 397 50.4
Lalb_Chr20g0121511 Lupinus albus HOM05D003913 ORTHO05D004803 2.3e-80 303.5 385 55.6
Actinidia29569 Actinidia chinensis HOM05D003913 ORTHO05D004803 1.3e-78 297.7 396 79.5
Potri.013G116900 Populus trichocarpa HOM05D003913 ORTHO05D004803 1.1e-77 294.7 406 72.2
Atru.chr13.1880 Acer truncatum HOM05D003913 ORTHO05D004803 1.4e-77 294.3 398 79.4
MD07G1041000 Malus domestica HOM05D003913 ORTHO05D004803 2.7e-76 290.0 395 77.5
FvH4_5g22350 Fragaria vesca HOM05D003913 ORTHO05D004803 3.5e-76 289.7 391 79.3
FAN18G2025 Fragaria x ananassa HOM05D003913 ORTHO05D004803 3.5e-76 289.7 391 79.3
FAN18G2798 Fragaria x ananassa HOM05D003913 ORTHO05D004803 3.5e-76 289.7 391 79.3
TWI12G0147 Tripterygium wilfordii HOM05D003913 ORTHO05D004803 7.8e-76 288.5 395 78.5
FAN08G0696 Fragaria x ananassa HOM05D003913 ORTHO05D004803 3.0e-75 286.6 391 78.3
PSO541G3150 Papaver somniferum HOM05D003913 ORTHO05D004803 6.6e-75 285.4 360 83.6
Sabra13G0099000 Salix brachista HOM05D003913 ORTHO05D004803 6.6e-75 285.4 396 78.3
RcHm_v2.0_Chr7g0210071 Rosa chinensis HOM05D003913 ORTHO05D004803 1.5e-74 284.3 391 79.0
VMungo1080G1176 Vigna mungo HOM05D003913 ORTHO05D004803 1.2e-73 281.2 397 60.7
Gorai.006G187200 Gossypium raimondii HOM05D003913 ORTHO05D004803 1.6e-73 280.8 392 51.3
MD02G1272000 Malus domestica HOM05D003913 ORTHO05D004803 3.6e-73 279.6 395 77.0
Phvul.011G104600 Phaseolus vulgaris HOM05D003913 ORTHO05D004803 1.1e-72 278.1 397 64.2
Gohir.D09G165400 Gossypium hirsutum HOM05D003913 ORTHO05D004803 1.8e-72 277.3 392 50.8
Oeu053831.1 Olea europaea HOM05D003913 ORTHO05D004803 6.8e-72 275.4 396 69.7
Aqoxy1G00206 Aquilegia oxysepala HOM05D003913 ORTHO05D004803 1.2e-71 274.6 381 74.0
Glyma.20G173100 Glycine max HOM05D003913 ORTHO05D004803 2.0e-71 273.9 381 58.3
CARHR290910 Cardamine hirsuta HOM05D003913 ORTHO05D004803 5.8e-71 272.3 399 65.9
Lj2C196T3 Lonicera japonica HOM05D003913 ORTHO05D004803 5.8e-71 272.3 390 54.6
CSS0047372 Camellia sinensis var. sinensis HOM05D003913 ORTHO05D004803 9.8e-71 271.6 393 76.6
arahy.Tifrunner.gnm1.ann1.0Z7T57 Arachis hypogaea HOM05D003913 ORTHO05D004803 2.2e-70 270.4 392 48.2
BolC6t38638H Brassica oleracea HOM05D003913 ORTHO05D004803 3.7e-70 269.6 411 54.3
arahy.Tifrunner.gnm1.ann1.F1WV5B Arachis hypogaea HOM05D003913 ORTHO05D004803 6.4e-70 268.9 392 47.7
LjContig00222g0022410 Lotus japonicus HOM05D003913 ORTHO05D004803 1.4e-69 267.7 399 46.6
Nitab4.5_0000366g0190 Nicotiana tabacum HOM05D003913 ORTHO05D004803 1.4e-69 267.7 401 73.3
RcHm_v2.0_Chr6g0272901 Rosa chinensis HOM05D003913 ORTHO05D004803 1.4e-69 267.7 396 75.8
TWI75G1061 Tripterygium wilfordii HOM05D003913 ORTHO05D004803 1.4e-69 267.7 395 76.2
FAN04G3257 Fragaria x ananassa HOM05D003913 ORTHO05D004803 1.9e-69 267.3 425 64.5
Nitab4.5_0002890g0020 Nicotiana tabacum HOM05D003913 ORTHO05D004803 1.9e-69 267.3 350 55.4
TAR625G1217 Trochodendron aralioides HOM05D003913 ORTHO05D004803 3.2e-69 266.5 386 76.7
BraA07t30691Z Brassica rapa HOM05D003913 ORTHO05D004803 4.1e-69 266.2 411 62.5
C06p35320 Brassica napus HOM05D003913 ORTHO05D004803 1.6e-68 264.2 425 61.9
BcaC08g46615 Brassica carinata HOM05D003913 ORTHO05D004803 2.1e-68 263.8 396 65.4
A07p30560 Brassica napus HOM05D003913 ORTHO05D004803 7.8e-68 261.9 425 48.2
CANSAT25G1043 Cannabis sativa HOM05D003913 ORTHO05D004803 3.0e-67 260.0 396 74.7
CiPaw.15G007000 Carya illinoinensis HOM05D003913 ORTHO05D004803 3.0e-67 260.0 401 68.3
FvH4_2g12470 Fragaria vesca HOM05D003913 ORTHO05D004803 3.9e-67 259.6 394 75.1
SalBow7G2889 Salvia bowleyana HOM05D003913 ORTHO05D004803 5.1e-67 259.2 401 62.8
Lj4A109T49 Lonicera japonica HOM05D003913 ORTHO05D004803 1.9e-66 257.3 396 75.5
PGSC0003DMG400028735 Solanum tuberosum HOM05D003913 ORTHO05D004803 2.5e-66 256.9 399 73.2
Thecc.08G198300 Theobroma cacao HOM05D003913 ORTHO05D004803 2.5e-66 256.9 392 49.0
BcaB03g15621 Brassica carinata HOM05D003913 ORTHO05D004803 3.3e-66 256.5 400 63.5
A07p37990 Brassica napus HOM05D003913 ORTHO05D004803 3.3e-66 256.5 395 65.1
C06p45910 Brassica napus HOM05D003913 ORTHO05D004803 2.8e-65 253.4 382 66.2
Solyc07g008860.3 Solanum lycopersicum HOM05D003913 ORTHO05D004803 2.8e-65 253.4 399 73.2
FAN24G0738 Fragaria x ananassa HOM05D003913 ORTHO05D004803 3.6e-65 253.1 394 74.4
Sopen07g004790 Solanum pennellii HOM05D003913 ORTHO05D004803 3.6e-65 253.1 399 73.2
Nn3g16733 Nelumbo nucifera HOM05D003913 ORTHO05D004803 6.8e-64 248.8 388 72.7
Aa31LG4G8790 Aethionema arabicum HOM05D003913 ORTHO05D004803 1.2e-63 248.1 413 62.5
Gorai.010G129100 Gossypium raimondii HOM05D003913 ORTHO05D004803 1.5e-63 247.7 391 46.8
Lsat_1_v5_gn_9_43060 Lactuca sativa HOM05D003913 ORTHO05D004803 1.5e-63 247.7 396 72.7
BolC6t39643H Brassica oleracea HOM05D003913 ORTHO05D004803 3.4e-63 246.5 395 64.6
PSO675G8150 Papaver somniferum HOM05D003913 ORTHO05D004803 4.4e-63 246.1 391 74.4
AL2G31420 Arabidopsis lyrata HOM05D003913 ORTHO05D004803 5.8e-63 245.7 389 64.5
Gohir.D06G113300 Gossypium hirsutum HOM05D003913 ORTHO05D004803 5.8e-63 245.7 391 46.5
Sp5g26870 Schrenkiella parvula HOM05D003913 ORTHO05D004803 7.5e-63 245.4 399 62.9
SpUn0020_0100 Schrenkiella parvula HOM05D003913 ORTHO05D004803 7.5e-63 245.4 399 62.9
Rhsim04G0038100 Rhododendron simsii HOM05D003913 ORTHO05D004803 2.2e-62 243.8 418 70.6
Thhalv10018505m.g Eutrema salsugineum HOM05D003913 ORTHO05D004803 3.7e-62 243.0 385 65.2
Cc11_g02860 Coffea canephora HOM05D003913 ORTHO05D004803 3.2e-61 240.0 397 66.0
ECA236G4407 Erigeron canadensis HOM05D003913 ORTHO05D004803 4.1e-61 239.6 387 46.3
ECA232G2276 Erigeron canadensis HOM05D003913 ORTHO05D004803 7.1e-61 238.8 385 72.2
Medtr1g097140 Medicago truncatula HOM05D003913 ORTHO05D004803 2.1e-60 237.3 379 40.1
GSVIVG01015205001 Vitis vinifera HOM05D003913 ORTHO05D004803 2.7e-60 236.9 397 55.2
THA.LOC104826775 Tarenaya hassleriana HOM05D003913 ORTHO05D004803 7.8e-60 235.3 388 64.4
Gohir.A06G109200 Gossypium hirsutum HOM05D003913 ORTHO05D004803 1.7e-59 234.2 362 48.1
MSTRG.9615 Avicennia marina HOM05D003913 ORTHO05D004803 3.9e-59 233.0 400 67.2
BcaC08g45753 Brassica carinata HOM05D003913 ORTHO05D004803 3.9e-59 233.0 401 61.6
EL10Ac6g15251 Beta vulgaris HOM05D003913 ORTHO05D004803 5.1e-59 232.6 397 71.3
BraA07t31364Z Brassica rapa HOM05D003913 ORTHO05D004803 6.6e-59 232.3 384 64.1
Psat6g188560 Pisum sativum HOM05D000168 ORTHO05D004803 1.5e-58 231.1 370 39.5
Aa31LG7G6630 Aethionema arabicum HOM05D003913 ORTHO05D004803 2.5e-58 230.3 397 38.0
Gohir.A09G169700 Gossypium hirsutum HOM05D003913 ORTHO05D004803 3.3e-58 229.9 392 44.9
Sabra19G0097800 Salix brachista HOM05D003913 ORTHO05D004803 9.5e-58 228.4 402 72.6
Ca_30575_v3 Cicer arietinum L. HOM05D003913 ORTHO05D004803 6.2e-57 225.7 397 37.5
Sc16g0003970 Simmondsia chinensis HOM05D003913 ORTHO05D004803 6.2e-57 225.7 338 78.4
DCAR_000644 Daucus carota HOM05D003913 ORTHO05D004803 8.1e-57 225.3 385 46.5
arahy.Tifrunner.gnm1.ann1.A7TGXU Arachis hypogaea HOM05D003913 ORTHO05D004803 2.4e-56 223.8 408 41.9
Sabra19G0101300 Salix brachista HOM05D003913 ORTHO05D004803 2.4e-56 223.8 402 70.6
Hund19608 Selenicereus undatus HOM05D003913 ORTHO05D004803 6.8e-56 222.2 439 59.5
Cfa018220 Carpinus fangiana HOM05D003913 ORTHO05D004803 2.6e-55 220.3 341 75.4
CDE08G0059 Ceratophyllum demersum HOM05D003913 ORTHO05D004803 9.9e-55 218.4 392 62.5
Ah.03g146560 Amaranthus hybridus HOM05D003913 ORTHO05D004803 1.3e-54 218.0 381 72.2
MBI10_g42737_MAGBIO Magnolia biondii HOM05D003913 ORTHO05D004803 2.2e-54 217.2 347 76.9
HanXRQChr11g0320411 Helianthus annuus HOM05D003913 ORTHO05D004803 4.9e-54 216.1 393 69.5
AT1G71840 Arabidopsis thaliana HOM05D003913 ORTHO05D004803 6.4e-54 215.7 388 61.1
SGA_v2.0_scaffold114G31919 Striga asiatica HOM05D003913 ORTHO05D004803 1.4e-53 214.5 343 70.6
GSVIVG01001592001 Vitis vinifera HOM05D003913 ORTHO05D004803 1.9e-53 214.2 395 68.1
VMungo0720G0336 Vigna mungo HOM05D003913 ORTHO05D004803 7.1e-53 212.2 400 56.0
Nitab4.5_0002890g0010 Nicotiana tabacum HOM05D003913 ORTHO05D004803 9.2e-53 211.8 328 47.3
COL.COLO4_13734 Corchorus olitorius HOM05D003913 ORTHO05D004803 6.0e-52 209.1 337 49.9
Oeu053830.1 Olea europaea HOM05D003913 ORTHO05D004803 6.0e-52 209.1 394 62.4
Rhsim06G0087400 Rhododendron simsii HOM05D003913 ORTHO05D004803 1.5e-50 204.5 491 59.3
AUR62017935 Chenopodium quinoa HOM05D003913 ORTHO05D004803 1.9e-50 204.1 398 61.6
Duzib211G0424 Durio zibethinus HOM05D003913 ORTHO05D004803 1.9e-50 204.1 402 44.8
EL10Ac5g10958 Beta vulgaris HOM05D003913 ORTHO05D004803 6.2e-49 199.1 401 34.7
ATR0001G003 Amborella trichopoda HOM05D003913 ORTHO05D004803 2.4e-48 197.2 341 44.0
Actinidia33168 Actinidia chinensis HOM05D003898 ORTHO05D004642 3.1e-48 196.8 279 50.2
Zm00001eb362180 Zea mays HOM05D003913 ORTHO05D004803 3.1e-48 196.8 402 50.2
Migut.J01123 Erythranthe guttata HOM05D003913 ORTHO05D004803 7.6e-47 192.2 404 36.9
Os03g0685600 Oryza sativa ssp. japonica HOM05D003913 ORTHO05D004803 7.6e-47 192.2 395 57.0
Hma1.2p1_0276F.1_g111300 Hydrangea macrophylla HOM05D003913 ORTHO05D004803 9.9e-47 191.8 308 72.7
Pp3c14_20020 Physcomitrium patens HOM05D003913 ORTHO05D004803 3.8e-46 189.9 411 64.0
Zm00001eb139680 Zea mays HOM05D003913 ORTHO05D004803 1.1e-45 188.3 401 59.9
FAN20G2057 Fragaria x ananassa HOM05D003913 ORTHO05D004803 3.2e-45 186.8 308 56.2
HPP92_008098 Vanilla planifolia HOM05D003913 ORTHO05D004803 1.2e-44 184.9 387 63.3
Peaxi162Scf01838g00003 Petunia axillaris HOM05D000173 ORTHO05D000316 2.7e-44 183.7 295 41.4
vmacro21210 Vaccinium macrocarpon HOM05D003913 ORTHO05D004803 7.8e-44 182.2 418 57.4
TPR.G30584 Trifolium pratense HOM05D003913 ORTHO05D004803 1.3e-43 181.4 400 34.2
CARHR124080 Cardamine hirsuta HOM05D003913 ORTHO05D004803 2.3e-43 180.6 380 34.5
TAR381G0993 Trochodendron aralioides HOM05D003913 ORTHO05D004803 5.1e-43 179.5 282 75.9
Eucgr.E02330 Eucalyptus grandis HOM05D003913 ORTHO05D004803 5.6e-42 176.0 288 74.3
Carub.0002s1860 Capsella rubella HOM05D003913 ORTHO05D004803 2.8e-41 173.7 399 56.9
Psat6g019720 Pisum sativum HOM05D003913 ORTHO05D004803 2.8e-41 173.7 266 41.0
Migut.I00088 Erythranthe guttata HOM05D003913 ORTHO05D004803 6.2e-41 172.6 411 46.0
DCAR_004603 Daucus carota HOM05D000366 ORTHO05D000437 1.1e-40 171.8 107 75.7
Cpa.g.sc2399.1 Carica papaya HOM05D003913 ORTHO05D004803 1.4e-40 171.4 288 75.7
unitig_747.g21315 Utricularia gibba HOM05D003913 ORTHO05D004803 6.9e-40 169.1 397 35.0
Haze_17883 Corylus avellana HOM05D003913 ORTHO05D004803 5.4e-37 159.5 493 54.6
MBI10_g41322_MAGBIO Magnolia biondii HOM05D003913 ORTHO05D004803 5.4e-37 159.5 113 69.0
QL02p034830 Quercus lobata HOM05D003913 ORTHO05D004803 1.6e-36 157.9 104 75.0
AUR62003626 Chenopodium quinoa HOM05D003913 ORTHO05D004803 1.3e-35 154.8 386 64.8
COL.COLO4_03395 Corchorus olitorius HOM05D003913 ORTHO05D004803 1.8e-35 154.5 110 70.9
Glyma.09G057500 Glycine max HOM05D003913 ORTHO05D004803 2.3e-35 154.1 168 47.6
SEGI_39165 Sequoiadendron giganteum HOM05D003913 ORTHO05D004803 1.1e-34 151.8 389 55.8
Mapoly0155s0005 Marchantia polymorpha HOM05D003913 ORTHO05D004803 1.5e-34 151.4 397 35.8
EL10Ac9g21859 Beta vulgaris HOM05D003913 ORTHO05D004803 2.5e-34 150.6 330 31.5
Migut.D01748 Erythranthe guttata HOM05D003913 ORTHO05D004803 4.3e-34 149.8 344 63.4
CANSAT11G1897 Cannabis sativa HOM05D003913 ORTHO05D004803 1.1e-32 145.2 105 70.5
Glyma.10G218600 Glycine max HOM05D003913 ORTHO05D004803 1.4e-32 144.8 120 62.5
AUR62024845 Chenopodium quinoa HOM05D003913 ORTHO05D004803 3.1e-32 143.7 394 29.2
AagrBONN_evm.TU.Sc2ySwM_368.376 Anthoceros agrestis HOM05D003913 ORTHO05D004803 1.7e-30 137.9 403 55.8
AUR62001664 Chenopodium quinoa HOM05D003913 ORTHO05D004803 3.2e-29 133.7 342 28.7
Thecc.09G236800 Theobroma cacao HOM05D003913 ORTHO05D004803 9.3e-29 132.1 379 30.3
Hma1.2p1_0276F.1_g111310 Hydrangea macrophylla HOM05D003913 ORTHO05D004803 5.6e-26 122.9 116 56.9
Glyma.10G218500 Glycine max HOM05D003913 ORTHO05D004803 1.2e-23 115.2 124 48.4
PSO455G0073 Papaver somniferum HOM05D003913 ORTHO05D004803 2.0e-23 114.4 64 81.2
Lj4C56G20 Lonicera japonica HOM05D003913 ORTHO05D004803 1.0e-22 112.1 213 34.7
SMO367G0065 Selaginella moellendorffii HOM05D003913 ORTHO05D004803 8.4e-22 109.0 352 28.4
Cre12.g487200 Chlamydomonas reinhardtii HOM05D003913 ORTHO05D004803 1.9e-21 107.8 414 27.8
SMO347G0114 Selaginella moellendorffii HOM05D003913 ORTHO05D004803 3.2e-21 107.1 392 32.9
SMO343G0013 Selaginella moellendorffii HOM05D003913 ORTHO05D004803 3.0e-19 100.5 381 26.2
Psat6g021120 Pisum sativum HOM05D003913 ORTHO05D004803 4.3e-18 96.7 130 43.1
BolC6t38649H Brassica oleracea HOM05D003913 ORTHO05D004803 2.2e-17 94.4 147 38.1
SHI13909 Sapria himalayana HOM05D003913 ORTHO05D004803 4.8e-17 93.2 93 51.6
Medtr7g079470 Medicago truncatula HOM05D003913 ORTHO05D004803 1.8e-16 91.3 65 67.7
MCO10G384 Micromonas commoda HOM05D003913 ORTHO05D004803 5.9e-15 86.3 370 40.0
BraA02t06789Z Brassica rapa HOM05D003913 ORTHO05D004803 1.3e-14 85.1 50 76.0
A02p17440 Brassica napus HOM05D003913 ORTHO05D004803 5.0e-14 83.2 50 74.0
Medtr7g111550 Medicago truncatula HOM05D003913 ORTHO05D004803 2.7e-12 77.4 105 42.9
CBR_g49506 Chara braunii HOM05D003913 ORTHO05D004803 7.9e-12 75.9 408 52.2
Glyma.17G173200 Glycine max HOM05D003913 ORTHO05D004803 4.3e-10 70.1 42 71.4
BolC6t38646H Brassica oleracea HOM05D003913 ORTHO05D004803 1.8e-08 64.7 150 30.7
BolC6t38648H Brassica oleracea HOM05D003420 ORTHO05D003970 2.4e-08 64.3 55 49.1
CSS0010217 Camellia sinensis var. sinensis HOM05D003913 ORTHO05D004803 4.5e-07 60.1 39 66.7


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