Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.02G185100 Manihot esculenta HOM05D007372 ORTHO05D009318 2.8e-132 475.3 244 100.0
Potri.002G062800 Populus trichocarpa HOM05D007372 ORTHO05D009318 7.5e-53 211.5 267 49.4
Sabra02G0050700 Salix brachista HOM05D007372 ORTHO05D009318 1.1e-51 207.6 252 51.6
Dinv02471 Davidia involucrata HOM05D007372 ORTHO05D009318 1.5e-48 197.2 338 38.2
Cfa018264 Carpinus fangiana HOM05D007372 ORTHO05D009318 8.0e-47 191.4 276 46.4
CiPaw.15G011400 Carya illinoinensis HOM05D007372 ORTHO05D009318 5.2e-46 188.7 284 46.5
PGR042G0625 Punica granatum HOM05D007372 ORTHO05D009318 2.2e-44 183.3 254 45.3
arahy.Tifrunner.gnm1.ann1.CL5RXG Arachis hypogaea HOM05D007372 ORTHO05D009318 1.2e-42 177.6 264 43.9
Nitab4.5_0004252g0050 Nicotiana tabacum HOM05D007372 ORTHO05D009318 1.6e-42 177.2 246 46.3
C06p45810 Brassica napus HOM05D007372 ORTHO05D009318 3.5e-42 176.0 255 42.7
arahy.Tifrunner.gnm1.ann1.1F4W04 Arachis hypogaea HOM05D007372 ORTHO05D009318 7.7e-42 174.9 264 43.2
Eucgr.F02675 Eucalyptus grandis HOM05D007372 ORTHO05D009318 1.7e-41 173.7 264 43.6
Nitab4.5_0007403g0010 Nicotiana tabacum HOM05D007372 ORTHO05D009318 2.3e-41 173.3 305 39.0
BcaC08g46602 Brassica carinata HOM05D007372 ORTHO05D009318 3.8e-41 172.6 254 42.1
Duzib093G1977 Durio zibethinus HOM05D007372 ORTHO05D009318 1.9e-40 170.2 302 39.4
BolC6t39633H Brassica oleracea HOM05D007372 ORTHO05D009318 3.3e-40 169.5 268 41.0
Phvul.004G088900 Phaseolus vulgaris HOM05D007372 ORTHO05D009318 3.3e-40 169.5 250 44.8
Sp5g26780 Schrenkiella parvula HOM05D007372 ORTHO05D009318 3.3e-40 169.5 261 42.1
THA.LOC104809747 Tarenaya hassleriana HOM05D007372 ORTHO05D009318 4.2e-40 169.1 256 44.1
TAR381G1194 Trochodendron aralioides HOM05D007372 ORTHO05D009318 4.2e-40 169.1 235 43.8
Gohir.A02G062200 Gossypium hirsutum HOM05D007372 ORTHO05D009318 9.5e-40 167.9 283 42.8
Cpa.g.sc26.120 Carica papaya HOM05D007372 ORTHO05D009318 4.7e-39 165.6 267 42.3
Aa31LG4G8880 Aethionema arabicum HOM05D007372 ORTHO05D009318 6.1e-39 165.2 262 42.4
Gohir.D02G067900 Gossypium hirsutum HOM05D007372 ORTHO05D009318 6.1e-39 165.2 291 41.6
A07p37910 Brassica napus HOM05D007372 ORTHO05D009318 1.0e-38 164.5 254 42.5
Gorai.005G076700 Gossypium raimondii HOM05D007372 ORTHO05D009318 1.8e-38 163.7 291 41.2
Actinidia17763 Actinidia chinensis HOM05D007372 ORTHO05D009318 3.0e-38 162.9 287 38.0
AL2G31330 Arabidopsis lyrata HOM05D007372 ORTHO05D009318 3.0e-38 162.9 260 41.5
Solyc04g072040.1 Solanum lycopersicum HOM05D007372 ORTHO05D009318 3.0e-38 162.9 207 49.8
Lj2g0008181 Lotus japonicus HOM05D007372 ORTHO05D009318 5.2e-38 162.2 264 40.5
Haze_17824 Corylus avellana HOM05D007372 ORTHO05D009318 6.8e-38 161.8 262 43.9
Carub.0002s1852 Capsella rubella HOM05D007372 ORTHO05D009318 8.9e-38 161.4 264 43.2
Sopen04g028150 Solanum pennellii HOM05D007372 ORTHO05D009318 1.2e-37 161.0 206 49.5
Glyma.02G077500 Glycine max HOM05D007372 ORTHO05D009318 2.0e-37 160.2 250 42.4
Nn5g28866 Nelumbo nucifera HOM05D007372 ORTHO05D009318 1.3e-36 157.5 247 41.3
VMungo0464G0612 Vigna mungo HOM05D007372 ORTHO05D009318 2.2e-36 156.8 260 41.5
Psat0ss32450g0040 Pisum sativum HOM05D007372 ORTHO05D009318 2.8e-36 156.4 261 41.8
QL02p037053 Quercus lobata HOM05D007372 ORTHO05D009318 6.3e-36 155.2 273 41.8
TWI60G0690 Tripterygium wilfordii HOM05D007372 ORTHO05D009318 1.1e-35 154.5 239 46.0
BraA07t31356Z Brassica rapa HOM05D007372 ORTHO05D009318 1.8e-35 153.7 252 40.5
Aqoxy6G00438 Aquilegia oxysepala HOM05D007372 ORTHO05D009318 2.4e-35 153.3 271 38.4
AT1G71760 Arabidopsis thaliana HOM05D007372 ORTHO05D009318 4.1e-35 152.5 261 37.9
Hma1.2p1_0678F.1_g202150 Hydrangea macrophylla HOM05D007372 ORTHO05D009318 5.4e-35 152.1 103 70.9
MD05G1035800 Malus domestica HOM05D007372 ORTHO05D009318 5.4e-35 152.1 269 41.3
AUR62034913 Chenopodium quinoa HOM05D007372 ORTHO05D009318 2.0e-34 150.2 297 38.0
Prupe.8G043800 Prunus persica HOM05D007372 ORTHO05D009318 2.7e-34 149.8 287 39.0
CsaV3_6G004890 Cucumis sativus L. HOM05D007372 ORTHO05D009318 3.5e-34 149.4 314 36.9
TPR.G19684 Trifolium pratense HOM05D007372 ORTHO05D009318 3.5e-34 149.4 263 39.9
CAN.G1183.23 Capsicum annuum HOM05D007372 ORTHO05D009318 5.9e-34 148.7 201 47.3
Lalb_Chr19g0129991 Lupinus albus HOM05D007372 ORTHO05D009318 2.3e-33 146.7 263 38.8
ClCG08G007220 Citrullus lanatus HOM05D007372 ORTHO05D009318 3.8e-33 146.0 240 42.9
Sed0016879 Sechium edule HOM05D007372 ORTHO05D009318 1.5e-32 144.1 298 36.6
CANSAT25G1084 Cannabis sativa HOM05D007372 ORTHO05D009318 3.3e-32 142.9 264 40.9
Migut.C00154 Erythranthe guttata HOM05D007372 ORTHO05D009318 2.8e-31 139.8 212 42.9
PSO675G2246 Papaver somniferum HOM05D007372 ORTHO05D009318 4.7e-31 139.0 283 36.4
TPR.G19681 Trifolium pratense HOM05D007372 ORTHO05D009318 1.4e-30 137.5 269 40.9
Rhsim06G0093000 Rhododendron simsii HOM05D007372 ORTHO05D009318 1.8e-30 137.1 296 36.1
PSO541G3596 Papaver somniferum HOM05D007372 ORTHO05D009318 2.0e-29 133.7 294 34.4
Lsat_1_v5_gn_9_42440 Lactuca sativa HOM05D007372 ORTHO05D009318 3.4e-29 132.9 213 43.2
MBI01_g29001_MAGBIO Magnolia biondii HOM05D007372 ORTHO05D009318 4.4e-29 132.5 245 40.0
Cc10_g06440 Coffea canephora HOM05D007372 ORTHO05D009318 7.5e-29 131.7 140 54.3
COL.COLO4_24577 Corchorus olitorius HOM05D007372 ORTHO05D009318 2.2e-28 130.2 155 50.3
QL02p036533 Quercus lobata HOM05D007372 ORTHO05D009318 2.2e-28 130.2 247 39.7
Thhalv10019840m.g Eutrema salsugineum HOM05D007372 ORTHO05D009318 8.3e-28 128.3 172 44.8
Hund17499 Selenicereus undatus HOM05D007372 ORTHO05D009318 1.1e-27 127.9 266 36.8
Sc26g0002770 Simmondsia chinensis HOM05D007372 ORTHO05D009318 1.1e-27 127.9 249 40.6
MELO3C019965.2 Cucumis melo HOM05D007372 ORTHO05D009318 2.4e-27 126.7 302 34.4
vmacro22649 Vaccinium macrocarpon HOM05D007372 ORTHO05D009318 2.4e-27 126.7 320 33.8
SalBow7G3614 Salvia bowleyana HOM05D007372 ORTHO05D009318 3.2e-27 126.3 266 38.3
GSVIVG01013700001 Vitis vinifera HOM05D007372 ORTHO05D009318 3.2e-27 126.3 150 51.3
Peaxi162Scf00360g00916 Petunia axillaris HOM05D007372 ORTHO05D009318 2.0e-26 123.6 275 34.5
unitig_46.g18009 Utricularia gibba HOM05D007372 ORTHO05D009318 7.8e-26 121.7 265 35.1
ATR1120G103 Amborella trichopoda HOM05D007372 ORTHO05D009318 1.7e-25 120.6 234 38.9
Ca_04659_v3 Cicer arietinum L. HOM05D007372 ORTHO05D009318 1.7e-25 120.6 253 36.4
MSTRG.969 Avicennia marina HOM05D007372 ORTHO05D009318 2.3e-25 120.2 103 60.2
FvH4_2g12850 Fragaria vesca HOM05D007372 ORTHO05D009318 5.0e-25 119.0 119 55.5
RcHm_v2.0_Chr6g0273891 Rosa chinensis HOM05D007372 ORTHO05D009318 8.6e-25 118.2 116 56.0
ECA232G4628 Erigeron canadensis HOM05D007372 ORTHO05D009318 1.1e-24 117.9 303 32.7
Ah.05g168260 Amaranthus hybridus HOM05D007372 ORTHO05D009318 1.9e-24 117.1 286 32.5
EL10Ac1g01626 Beta vulgaris HOM05D007372 ORTHO05D009318 2.5e-24 116.7 281 34.9
HPP92_004582 Vanilla planifolia HOM05D007372 ORTHO05D009318 4.3e-24 115.9 116 52.6
SGA_v2.0_scaffold82G26208 Striga asiatica HOM05D007372 ORTHO05D009318 7.3e-24 115.2 306 30.7
CARHR291030 Cardamine hirsuta HOM05D007372 ORTHO05D009318 3.6e-23 112.8 156 45.5
vmacro22532 Vaccinium macrocarpon HOM05D007372 ORTHO05D009318 3.6e-23 112.8 315 31.7
Medtr1191s0010 Medicago truncatula HOM05D007372 ORTHO05D009318 8.0e-23 111.7 128 51.6
MBI01_g42373_MAGBIO Magnolia biondii HOM05D007372 ORTHO05D009318 2.3e-22 110.2 159 45.3
Ciclev10001857m.g Citrus clementina HOM05D007372 ORTHO05D009318 8.9e-22 108.2 60 85.0
Psat6g060160 Pisum sativum HOM05D007372 ORTHO05D009318 1.7e-20 104.0 120 46.7
Os01g0716300 Oryza sativa ssp. japonica HOM05D007372 ORTHO05D009318 1.9e-19 100.5 121 52.1
FAN24G0386 Fragaria x ananassa HOM05D023021 ORTHO05D025344 7.8e-18 95.1 269 31.2
Zm00001eb361480 Zea mays HOM05D007372 ORTHO05D009318 1.1e-16 91.3 205 35.1
Medtr0571s0030 Medicago truncatula HOM05D007372 ORTHO05D009318 1.5e-16 90.9 104 51.0
Mapoly0147s0022 Marchantia polymorpha HOM05D007372 ORTHO05D009318 1.4e-14 84.3 189 36.0
Rhsim04G0161000 Rhododendron simsii HOM05D007372 ORTHO05D009318 2.3e-14 83.6 81 55.6
Rhsim06G0189600 Rhododendron simsii HOM05D007372 ORTHO05D009318 9.9e-13 78.2 81 54.3
SpUn0095_0010 Schrenkiella parvula HOM05D007372 ORTHO05D009318 8.3e-12 75.1 174 33.3
AagrBONN_evm.TU.Sc2ySwM_117.786 Anthoceros agrestis HOM05D007372 ORTHO05D009318 4.6e-10 69.3 115 37.4
HanXRQChr11g0343631 Helianthus annuus HOM05D007372 ORTHO05D009318 2.3e-09 67.0 125 40.8
SMO304G0033 Selaginella moellendorffii HOM05D007372 ORTHO05D009318 1.1e-08 64.7 108 37.0
Oeu046069.1 Olea europaea HOM05D007372 ORTHO05D009318 9.5e-08 61.6 166 32.5
PGSC0003DMG400025053 Solanum tuberosum HOM05D007372 ORTHO05D009318 3.6e-07 59.7 154 32.5


User provided reference genes

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