Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.02G182301 Manihot esculenta HOM05D004894 ORTHO05D005689 1.3e-91 339.7 175 100.0
Manes.02G182200 Manihot esculenta HOM05D004894 ORTHO05D009560 4.2e-66 255.0 173 76.3
SHI09078 Sapria himalayana HOM05D004894 ORTHO05D005689 1.1e-29 134.0 158 46.2
TWI34G1211 Tripterygium wilfordii HOM05D004894 ORTHO05D005689 3.7e-22 109.0 160 38.8
Haze_17791 Corylus avellana HOM05D004894 ORTHO05D009560 1.1e-18 97.4 149 37.6
MD10G1032600 Malus domestica HOM05D004894 ORTHO05D005689 1.1e-18 97.4 173 35.8
Cfa018297 Carpinus fangiana HOM05D004894 ORTHO05D005689 1.2e-17 94.0 155 38.7
QL02p038562 Quercus lobata HOM05D004894 ORTHO05D005689 1.2e-17 94.0 162 35.8
QL02p037592 Quercus lobata HOM05D004894 ORTHO05D005689 2.8e-17 92.8 162 35.2
Cfa018299 Carpinus fangiana HOM05D004894 ORTHO05D005689 4.7e-17 92.0 178 34.3
MD10G1032700 Malus domestica HOM05D004894 ORTHO05D005689 4.7e-17 92.0 167 32.3
QL02p037589 Quercus lobata HOM05D004894 ORTHO05D005689 8.9e-16 87.8 172 32.6
QL02p038558 Quercus lobata HOM05D004894 ORTHO05D005689 8.9e-16 87.8 160 33.1
Prupe.8G038100 Prunus persica HOM05D004894 ORTHO05D005689 1.5e-15 87.0 155 32.9
CiPaw.16G009500 Carya illinoinensis HOM05D004894 ORTHO05D005689 3.4e-15 85.9 155 32.3
Ciclev10003123m.g Citrus clementina HOM05D004894 ORTHO05D005689 1.3e-14 84.0 153 32.0
MD10G1032400 Malus domestica HOM05D004894 ORTHO05D005689 6.4e-14 81.6 130 37.7
Ciclev10002638m.g Citrus clementina HOM05D004894 ORTHO05D005689 2.4e-13 79.7 152 29.6
ECA233G5340 Erigeron canadensis HOM05D020282 ORTHO05D010160 3.2e-13 79.3 149 29.5
Haze_17792 Corylus avellana HOM05D004894 ORTHO05D005689 9.2e-13 77.8 177 32.8
SHI09077 Sapria himalayana HOM05D010921 ORTHO05D013092 1.2e-12 77.4 149 34.2
Cfa018298 Carpinus fangiana HOM05D004894 ORTHO05D005689 6.0e-12 75.1 177 32.8
Haze_17777 Corylus avellana HOM05D004894 ORTHO05D005689 6.0e-12 75.1 171 32.2
Oeu061438.1 Olea europaea HOM05D011489 ORTHO05D014472 1.3e-11 73.9 180 32.8
Gorai.009G264900 Gossypium raimondii HOM05D007679 ORTHO05D009560 2.3e-11 73.2 182 30.8
Nn1g08310 Nelumbo nucifera HOM05D008403 ORTHO05D010317 3.9e-11 72.4 156 28.2
Nn1g00654 Nelumbo nucifera HOM05D001445 ORTHO05D001261 5.1e-11 72.0 158 28.5
Gohir.D05G252300 Gossypium hirsutum HOM05D007679 ORTHO05D009560 1.1e-10 70.9 182 30.2
Cpa.g.sc49.91 Carica papaya HOM05D007679 ORTHO05D009560 1.5e-10 70.5 175 29.7
Cpa.g.sc49.90 Carica papaya HOM05D007679 ORTHO05D009560 1.9e-10 70.1 149 32.9
Sabra13G0011900 Salix brachista HOM05D004894 ORTHO05D009560 3.3e-10 69.3 174 31.0
Psat7g222760 Pisum sativum HOM05D004894 ORTHO05D005689 4.3e-10 68.9 174 29.9
Oeu046059.1 Olea europaea HOM05D011489 ORTHO05D014472 9.6e-10 67.8 183 30.6
Gohir.A05G251500 Gossypium hirsutum HOM05D007679 ORTHO05D009560 1.2e-09 67.4 153 30.1
Potri.013G012800 Populus trichocarpa HOM05D010921 ORTHO05D013092 1.2e-09 67.4 162 30.9
Medtr4g062290 Medicago truncatula HOM05D004894 ORTHO05D005689 2.8e-09 66.2 137 32.8
CiPaw.15G014000 Carya illinoinensis HOM05D004894 ORTHO05D005689 3.6e-09 65.9 127 31.5
Gorai.009G257300 Gossypium raimondii HOM05D007679 ORTHO05D009560 6.2e-09 65.1 180 28.9
SalBow3G0814 Salvia bowleyana HOM05D011489 ORTHO05D014472 6.2e-09 65.1 164 28.7
Gorai.009G256200 Gossypium raimondii HOM05D007679 ORTHO05D009560 8.1e-09 64.7 153 29.4
Gorai.009G256800 Gossypium raimondii HOM05D007679 ORTHO05D009560 8.1e-09 64.7 180 27.2
Ciclev10003694m.g Citrus clementina HOM05D004894 ORTHO05D005689 1.4e-08 63.9 115 33.0
Gohir.A05G245372 Gossypium hirsutum HOM05D007679 ORTHO05D009560 1.4e-08 63.9 180 27.2
Dinv29549 Davidia involucrata HOM05D003146 ORTHO05D001819 1.8e-08 63.5 135 27.4
Gorai.009G257500 Gossypium raimondii HOM05D007679 ORTHO05D009560 1.8e-08 63.5 165 27.3
CSS0042410 Camellia sinensis var. sinensis HOM05D007679 ORTHO05D009560 2.4e-08 63.2 145 29.0
arahy.Tifrunner.gnm1.ann1.P5DTJP Arachis hypogaea HOM05D004894 ORTHO05D005689 3.1e-08 62.8 180 29.4
CiPaw.14G016700 Carya illinoinensis HOM05D001445 ORTHO05D001261 5.2e-08 62.0 145 28.3
Dinv29548 Davidia involucrata HOM05D003146 ORTHO05D001819 6.8e-08 61.6 153 26.1
THA.LOC104802649 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 6.8e-08 61.6 174 26.4
arahy.Tifrunner.gnm1.ann1.VH20NJ Arachis hypogaea HOM05D004894 ORTHO05D005689 8.9e-08 61.2 145 29.0
Cc11_g04920 Coffea canephora HOM05D003146 ORTHO05D001819 8.9e-08 61.2 169 26.0
Atru.chr13.2013 Acer truncatum HOM05D004894 ORTHO05D005689 1.5e-07 60.5 180 28.3
BraA02t06621Z Brassica rapa HOM05D007751 ORTHO05D009813 1.5e-07 60.5 143 28.7
Carub.0008s1001 Capsella rubella HOM05D007751 ORTHO05D009813 1.5e-07 60.5 120 33.3
Gohir.1Z049488 Gossypium hirsutum HOM05D007679 ORTHO05D009560 1.5e-07 60.5 150 28.0
Gohir.A05G245251 Gossypium hirsutum HOM05D007679 ORTHO05D009560 1.5e-07 60.5 150 28.0
THA.LOC104802648 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 1.5e-07 60.5 168 25.6
AL8G24030 Arabidopsis lyrata HOM05D007751 ORTHO05D009813 2.0e-07 60.1 122 32.0
Gorai.009G255700 Gossypium raimondii HOM05D007679 ORTHO05D009560 2.0e-07 60.1 182 28.0
BolC2t08647H Brassica oleracea HOM05D007751 ORTHO05D009813 2.6e-07 59.7 110 30.9
C02p25780 Brassica napus HOM05D007751 ORTHO05D009813 4.4e-07 58.9 143 28.0
Gorai.009G256300 Gossypium raimondii HOM05D007679 ORTHO05D009560 7.6e-07 58.2 180 27.2
Phvul.003G116500 Phaseolus vulgaris HOM05D001578 ORTHO05D001207 7.6e-07 58.2 124 28.2
Sabra13G0011600 Salix brachista HOM05D010921 ORTHO05D013092 7.6e-07 58.2 148 29.7
AL8G24050 Arabidopsis lyrata HOM05D007751 ORTHO05D009813 9.9e-07 57.8 120 31.7
Prupe.3G007700 Prunus persica HOM05D001578 ORTHO05D001207 1.3e-06 57.4 163 25.2
QL04p026153 Quercus lobata HOM05D001445 ORTHO05D001261 1.7e-06 57.0 174 23.6
Gohir.D05G246600 Gossypium hirsutum HOM05D007679 ORTHO05D009560 2.2e-06 56.6 155 28.4
MBI07_g43317_MAGBIO Magnolia biondii HOM05D011459 ORTHO05D001261 2.2e-06 56.6 137 28.5
TAR627G0716 Trochodendron aralioides HOM05D008403 ORTHO05D010317 2.2e-06 56.6 129 27.9
Gorai.004G168200 Gossypium raimondii HOM05D001445 ORTHO05D001261 2.9e-06 56.2 146 27.4
MBI07_g46097_MAGBIO Magnolia biondii HOM05D011459 ORTHO05D013640 2.9e-06 56.2 142 28.2
TPR.G12614 Trifolium pratense HOM05D004894 ORTHO05D005689 3.8e-06 55.8 167 24.0
Gohir.D08G161800 Gossypium hirsutum HOM05D001445 ORTHO05D001261 6.4e-06 55.1 144 27.1
Ciclev10023580m.g Citrus clementina HOM05D023468 ORTHO05D022406 8.4e-06 54.7 118 29.7
THA.LOC104799810 Tarenaya hassleriana HOM05D007751 ORTHO05D009813 8.4e-06 54.7 123 29.3


User provided reference genes

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