Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.02G181000 Manihot esculenta HOM05D002879 ORTHO05D002930 0.0e+00 1222.2 719 100.0
Manes.02G180800 Manihot esculenta HOM05D002879 ORTHO05D002930 3.5e-90 337.0 795 37.0
Actinidia29538 Actinidia chinensis HOM05D002879 ORTHO05D002930 1.4e-11 75.9 66 57.6
Aqoxy5G02058 Aquilegia oxysepala HOM05D002879 ORTHO05D002930 5.5e-11 73.9 74 51.4
TAR625G0538 Trochodendron aralioides HOM05D002879 ORTHO05D002930 1.6e-10 72.4 89 46.1
TAR625G0963 Trochodendron aralioides HOM05D002879 ORTHO05D002930 1.8e-09 68.9 66 50.0
Haze_17769 Corylus avellana HOM05D002879 ORTHO05D002930 3.0e-09 68.2 70 51.4
Potri.005G193901 Populus trichocarpa HOM05D002879 ORTHO05D002930 3.0e-09 68.2 69 49.3
TPR.G31183 Trifolium pratense HOM05D002879 ORTHO05D002930 3.0e-09 68.2 66 54.5
Eucgr.E02068 Eucalyptus grandis HOM05D002879 ORTHO05D002930 3.9e-09 67.8 69 55.1
Eucgr.E02063 Eucalyptus grandis HOM05D002879 ORTHO05D002930 6.7e-09 67.0 70 50.0
Haze_17773 Corylus avellana HOM05D002879 ORTHO05D002930 8.7e-09 66.6 92 42.4
Migut.N02014 Erythranthe guttata HOM05D002879 ORTHO05D002930 1.1e-08 66.2 67 49.3
Duzib116G0596 Durio zibethinus HOM05D002879 ORTHO05D002930 4.3e-08 64.3 74 48.6
Solyc04g071580.3 Solanum lycopersicum HOM05D002879 ORTHO05D002930 4.3e-08 64.3 71 47.9
Migut.N01982 Erythranthe guttata HOM05D002879 ORTHO05D002930 5.7e-08 63.9 66 48.5
Migut.N02015 Erythranthe guttata HOM05D002879 ORTHO05D002930 5.7e-08 63.9 66 48.5
Potri.005G193800 Populus trichocarpa HOM05D002879 ORTHO05D002930 5.7e-08 63.9 66 48.5
Haze_17772 Corylus avellana HOM05D002879 ORTHO05D002930 9.7e-08 63.2 60 55.0
Migut.C00982 Erythranthe guttata HOM05D002879 ORTHO05D002930 9.7e-08 63.2 62 48.4
Peaxi162Scf00599g00009 Petunia axillaris HOM05D002879 ORTHO05D002930 9.7e-08 63.2 54 57.4
CAN.G264.3 Capsicum annuum HOM05D002879 ORTHO05D002930 2.8e-07 61.6 53 56.6
Eucgr.L02884 Eucalyptus grandis HOM05D002879 ORTHO05D002930 2.8e-07 61.6 70 48.6
Thecc.08G154600 Theobroma cacao HOM05D002879 ORTHO05D002930 3.7e-07 61.2 53 58.5
Eucgr.E02065 Eucalyptus grandis HOM05D002879 ORTHO05D002930 6.3e-07 60.5 88 43.2
Eucgr.E02071 Eucalyptus grandis HOM05D002879 ORTHO05D002930 6.3e-07 60.5 89 41.6
arahy.Tifrunner.gnm1.ann1.4DJY3R Arachis hypogaea HOM05D002879 ORTHO05D002930 8.2e-07 60.1 54 55.6
arahy.Tifrunner.gnm1.ann1.MV46JJ Arachis hypogaea HOM05D002879 ORTHO05D002930 8.2e-07 60.1 54 55.6
Lj5g0010855 Lotus japonicus HOM05D002879 ORTHO05D002930 8.2e-07 60.1 50 58.0
arahy.Tifrunner.gnm1.ann1.HS8YG8 Arachis hypogaea HOM05D002879 ORTHO05D002930 1.4e-06 59.3 102 39.2
AUR62040599 Chenopodium quinoa HOM05D002879 ORTHO05D002930 1.4e-06 59.3 96 46.9
Eucgr.E02066 Eucalyptus grandis HOM05D002879 ORTHO05D002930 1.4e-06 59.3 70 47.1
Peaxi162Scf01294g00118 Petunia axillaris HOM05D002879 ORTHO05D002930 1.4e-06 59.3 52 55.8
Eucgr.E02069 Eucalyptus grandis HOM05D002879 ORTHO05D002930 1.8e-06 58.9 88 42.0
GSVIVG01034550001 Vitis vinifera HOM05D002879 ORTHO05D002930 1.8e-06 58.9 105 35.2
Lalb_Chr03g0035371 Lupinus albus HOM05D002879 ORTHO05D002930 2.4e-06 58.5 78 41.0
Nitab4.5_0001187g0090 Nicotiana tabacum HOM05D002879 ORTHO05D002930 2.4e-06 58.5 90 40.0
vmacro02690 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 2.4e-06 58.5 52 57.7
Eucgr.E02064 Eucalyptus grandis HOM05D002879 ORTHO05D002930 3.1e-06 58.2 94 39.4
Glyma.10G224300 Glycine max HOM05D002879 ORTHO05D002930 3.1e-06 58.2 49 59.2
Nitab4.5_0002764g0050 Nicotiana tabacum HOM05D002879 ORTHO05D002930 3.1e-06 58.2 71 43.7
Atru.chr13.2082 Acer truncatum HOM05D002879 ORTHO05D002930 6.9e-06 57.0 48 54.2
Eucgr.E02070 Eucalyptus grandis HOM05D002879 ORTHO05D002930 6.9e-06 57.0 88 40.9
Solyc04g071610.4 Solanum lycopersicum HOM05D002879 ORTHO05D002930 6.9e-06 57.0 99 37.4
Sopen04g027590 Solanum pennellii HOM05D002879 ORTHO05D002930 6.9e-06 57.0 99 37.4
MELO3C025026.2 Cucumis melo HOM05D002879 ORTHO05D002930 9.1e-06 56.6 92 40.2
Hund17173 Selenicereus undatus HOM05D002879 ORTHO05D002930 9.1e-06 56.6 105 41.0
vmacro12405 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 9.1e-06 56.6 54 51.9


User provided reference genes

Program Settings