Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.02G180800 Manihot esculenta HOM05D002879 ORTHO05D002930 0.0e+00 5974.0 3914 100.0
Manes.02G181000 Manihot esculenta HOM05D002879 ORTHO05D002930 1.1e-89 337.8 795 37.0
TAR625G0538 Trochodendron aralioides HOM05D002879 ORTHO05D002930 1.4e-15 91.7 89 52.8
Lalb_Chr03g0035371 Lupinus albus HOM05D002879 ORTHO05D002930 5.3e-15 89.7 89 51.7
Actinidia29538 Actinidia chinensis HOM05D002879 ORTHO05D002930 4.9e-13 83.2 84 53.6
TAR625G0963 Trochodendron aralioides HOM05D002879 ORTHO05D002930 2.4e-12 80.9 89 46.1
Potri.005G193901 Populus trichocarpa HOM05D002879 ORTHO05D002930 3.2e-12 80.5 76 44.7
Nitab4.5_0001187g0090 Nicotiana tabacum HOM05D002879 ORTHO05D002930 7.1e-12 79.3 89 48.3
Nitab4.5_0002764g0010 Nicotiana tabacum HOM05D002879 ORTHO05D002930 2.7e-11 77.4 89 47.2
Aqoxy5G02058 Aquilegia oxysepala HOM05D002879 ORTHO05D002930 3.5e-11 77.0 79 46.8
Solyc04g071580.3 Solanum lycopersicum HOM05D002879 ORTHO05D002930 6.0e-11 76.3 76 52.6
Potri.005G193800 Populus trichocarpa HOM05D002879 ORTHO05D002930 2.3e-10 74.3 67 55.2
arahy.Tifrunner.gnm1.ann1.HS8YG8 Arachis hypogaea HOM05D002879 ORTHO05D002930 3.0e-10 73.9 89 48.3
Haze_17773 Corylus avellana HOM05D002879 ORTHO05D002930 3.0e-10 73.9 104 42.3
Migut.N02014 Erythranthe guttata HOM05D002879 ORTHO05D002930 6.6e-10 72.8 71 52.1
Eucgr.E02065 Eucalyptus grandis HOM05D002879 ORTHO05D002930 6.6e-10 72.8 81 44.4
Eucgr.E02071 Eucalyptus grandis HOM05D002879 ORTHO05D002930 6.6e-10 72.8 82 42.7
TPR.G31183 Trifolium pratense HOM05D002879 ORTHO05D002930 1.1e-09 72.0 89 44.9
Eucgr.E02069 Eucalyptus grandis HOM05D002879 ORTHO05D002930 1.9e-09 71.2 81 43.2
Migut.N01982 Erythranthe guttata HOM05D002879 ORTHO05D002930 3.3e-09 70.5 70 51.4
Migut.N02015 Erythranthe guttata HOM05D002879 ORTHO05D002930 3.3e-09 70.5 70 51.4
THA.LOC104809205 Tarenaya hassleriana HOM05D002879 ORTHO05D002930 4.3e-09 70.1 91 46.2
Eucgr.E02070 Eucalyptus grandis HOM05D002879 ORTHO05D002930 7.3e-09 69.3 81 42.0
Nitab4.5_0002764g0050 Nicotiana tabacum HOM05D002879 ORTHO05D002930 7.3e-09 69.3 76 48.7
arahy.Tifrunner.gnm1.ann1.4DJY3R Arachis hypogaea HOM05D002879 ORTHO05D002930 9.6e-09 68.9 50 64.0
arahy.Tifrunner.gnm1.ann1.MV46JJ Arachis hypogaea HOM05D002879 ORTHO05D002930 9.6e-09 68.9 50 64.0
Duzib116G0596 Durio zibethinus HOM05D002879 ORTHO05D002930 9.6e-09 68.9 115 40.0
Eucgr.E02063 Eucalyptus grandis HOM05D002879 ORTHO05D002930 9.6e-09 68.9 71 45.1
Eucgr.E02064 Eucalyptus grandis HOM05D002879 ORTHO05D002930 1.6e-08 68.2 82 42.7
Eucgr.E02058 Eucalyptus grandis HOM05D002879 ORTHO05D002930 2.1e-08 67.8 90 44.4
Peaxi162Scf00599g00009 Petunia axillaris HOM05D002879 ORTHO05D002930 2.1e-08 67.8 56 57.1
Peaxi162Scf01294g00118 Petunia axillaris HOM05D002879 ORTHO05D002930 2.1e-08 67.8 93 40.9
Glyma.10G224300 Glycine max HOM05D002879 ORTHO05D002930 4.8e-08 66.6 91 44.0
Sc26g0002490 Simmondsia chinensis HOM05D002879 ORTHO05D002930 4.8e-08 66.6 73 46.6
Eucgr.E02068 Eucalyptus grandis HOM05D002879 ORTHO05D002930 6.2e-08 66.2 67 55.2
Solyc04g071610.4 Solanum lycopersicum HOM05D002879 ORTHO05D002930 6.2e-08 66.2 99 41.4
Sopen04g027590 Solanum pennellii HOM05D002879 ORTHO05D002930 6.2e-08 66.2 99 41.4
Dinv41066 Davidia involucrata HOM05D002879 ORTHO05D002930 8.1e-08 65.9 91 42.9
Eucgr.L02884 Eucalyptus grandis HOM05D002879 ORTHO05D002930 1.1e-07 65.5 78 42.3
TWI34G0242 Tripterygium wilfordii HOM05D002879 ORTHO05D002930 1.1e-07 65.5 45 66.7
Thecc.08G154600 Theobroma cacao HOM05D002879 ORTHO05D002930 1.8e-07 64.7 89 41.6
Migut.C00982 Erythranthe guttata HOM05D002879 ORTHO05D002930 2.4e-07 64.3 59 54.2
MBI09_g23868_MAGBIO Magnolia biondii HOM05D002879 ORTHO05D002930 2.4e-07 64.3 89 43.8
Manes.18G093201 Manihot esculenta HOM05D002879 ORTHO05D002930 2.4e-07 64.3 155 36.1
GSVIVG01034550001 Vitis vinifera HOM05D002879 ORTHO05D002930 2.4e-07 64.3 104 40.4
CAN.G264.3 Capsicum annuum HOM05D002879 ORTHO05D002930 3.1e-07 63.9 61 50.8
Eucgr.E02066 Eucalyptus grandis HOM05D002879 ORTHO05D002930 3.1e-07 63.9 80 41.2
vmacro12405 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 3.1e-07 63.9 122 38.5
Nitab4.5_0001187g0070 Nicotiana tabacum HOM05D002879 ORTHO05D002930 4.0e-07 63.5 79 44.3
QL02p029929 Quercus lobata HOM05D002879 ORTHO05D002930 4.0e-07 63.5 88 42.0
vmacro02690 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 4.0e-07 63.5 53 62.3
Lj5g0010855 Lotus japonicus HOM05D002879 ORTHO05D002930 5.3e-07 63.2 50 58.0
Atru.chr13.2082 Acer truncatum HOM05D002879 ORTHO05D002930 6.9e-07 62.8 51 54.9
FvH4_2g13410 Fragaria vesca HOM05D002879 ORTHO05D002930 6.9e-07 62.8 91 40.7
Rhsim11G0084200 Rhododendron simsii HOM05D002879 ORTHO05D002930 6.9e-07 62.8 129 34.9
Sc26g0002520 Simmondsia chinensis HOM05D002879 ORTHO05D002930 6.9e-07 62.8 58 56.9
Rhsim11G0084500 Rhododendron simsii HOM05D002879 ORTHO05D002930 9.0e-07 62.4 91 35.2
PGSC0003DMG400006662 Solanum tuberosum HOM05D002879 ORTHO05D002930 9.0e-07 62.4 99 40.4
CSS0043717 Camellia sinensis var. sinensis HOM05D002879 ORTHO05D002930 1.5e-06 61.6 88 42.0
Haze_17769 Corylus avellana HOM05D002879 ORTHO05D002930 1.5e-06 61.6 89 46.1
Sc26g0002530 Simmondsia chinensis HOM05D002879 ORTHO05D002930 2.0e-06 61.2 58 56.9
TPR.G22164 Trifolium pratense HOM05D002879 ORTHO05D002930 2.0e-06 61.2 50 56.0
vmacro02691 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 2.0e-06 61.2 69 53.6
vmacro23422 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 2.0e-06 61.2 67 43.3
CAN.G264.2 Capsicum annuum HOM05D002879 ORTHO05D002930 2.6e-06 60.8 90 38.9
AUR62040599 Chenopodium quinoa HOM05D002879 ORTHO05D002930 2.6e-06 60.8 112 37.5
Haze_17772 Corylus avellana HOM05D002879 ORTHO05D002930 2.6e-06 60.8 102 37.3
SEGI_09931 Sequoiadendron giganteum HOM05D002879 ORTHO05D002930 2.6e-06 60.8 68 51.5
Cfa018310 Carpinus fangiana HOM05D002879 ORTHO05D002930 5.8e-06 59.7 111 35.1
Peaxi162Scf00599g00115 Petunia axillaris HOM05D002879 ORTHO05D002930 5.8e-06 59.7 87 40.2
Actinidia29536 Actinidia chinensis HOM05D002879 ORTHO05D002930 7.6e-06 59.3 88 31.8
CAN.G264.1 Capsicum annuum HOM05D002879 ORTHO05D002930 7.6e-06 59.3 97 38.1
Hma1.2p1_0240F.1_g100350 Hydrangea macrophylla HOM05D002879 ORTHO05D002930 7.6e-06 59.3 71 45.1
SEGI_08871 Sequoiadendron giganteum HOM05D002879 ORTHO05D002930 7.6e-06 59.3 45 57.8
Actinidia04759 Actinidia chinensis HOM05D002879 ORTHO05D002930 9.9e-06 58.9 87 37.9


User provided reference genes

Program Settings