Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.02G175500 Manihot esculenta HOM05D007510 ORTHO05D009587 1.1e-51 206.5 116 100.0
Potri.007G017200 Populus trichocarpa HOM05D007510 ORTHO05D009587 2.0e-16 89.4 98 63.3
Aa31LG11G5850 Aethionema arabicum HOM05D007510 ORTHO05D009587 5.0e-15 84.7 69 62.3
CiPaw.08G136300 Carya illinoinensis HOM05D007510 ORTHO05D009587 1.5e-14 83.2 113 47.8
Aa31LG1G14840 Aethionema arabicum HOM05D007510 ORTHO05D009587 3.2e-14 82.0 68 54.4
CiPaw.04G025800 Carya illinoinensis HOM05D007510 ORTHO05D009587 5.5e-14 81.3 62 61.3
BcaB08g36792 Brassica carinata HOM05D007510 ORTHO05D009587 2.1e-13 79.3 101 46.5
HanXRQChr11g0325681 Helianthus annuus HOM05D007510 ORTHO05D009587 2.7e-13 79.0 38 84.2
BcaNung00409 Brassica carinata HOM05D007510 ORTHO05D009587 4.7e-13 78.2 74 52.7
HanXRQChr15g0494821 Helianthus annuus HOM05D007510 ORTHO05D009587 8.0e-13 77.4 38 84.2
QL06p034549 Quercus lobata HOM05D007510 ORTHO05D009587 8.0e-13 77.4 112 53.6
COL.COLO4_21980 Corchorus olitorius HOM05D001094 ORTHO05D001050 1.0e-12 77.0 83 49.4
Atru.chr3.749 Acer truncatum HOM05D007510 ORTHO05D009587 1.4e-12 76.6 45 77.8
A10p22120 Brassica napus HOM05D007510 ORTHO05D009587 1.4e-12 76.6 99 44.4
BraA10t44271Z Brassica rapa HOM05D007510 ORTHO05D009587 1.4e-12 76.6 99 44.4
Hma1.2p1_0266F.1_g107010 Hydrangea macrophylla HOM05D007510 ORTHO05D009587 1.4e-12 76.6 37 81.1
Medtr8g076660 Medicago truncatula HOM05D007510 ORTHO05D009587 1.4e-12 76.6 73 54.8
Cfa006928 Carpinus fangiana HOM05D007510 ORTHO05D009587 1.8e-12 76.3 45 75.6
TPR.G21530 Trifolium pratense HOM05D007510 ORTHO05D009587 1.8e-12 76.3 78 50.0
AUR62007639 Chenopodium quinoa HOM05D007510 ORTHO05D009587 2.3e-12 75.9 58 56.9
Ciclev10026716m.g Citrus clementina HOM05D007510 ORTHO05D009587 2.3e-12 75.9 37 86.5
Lsat_1_v5_gn_4_151140 Lactuca sativa HOM05D007510 ORTHO05D009587 2.3e-12 75.9 38 81.6
TAR625G1319 Trochodendron aralioides HOM05D007510 ORTHO05D009587 2.3e-12 75.9 40 75.0
Oeu037724.1 Olea europaea HOM05D007510 ORTHO05D009587 3.0e-12 75.5 103 42.7
Phvul.003G257700 Phaseolus vulgaris HOM05D007510 ORTHO05D009587 3.0e-12 75.5 44 75.0
Gohir.A02G168700 Gossypium hirsutum HOM05D007510 ORTHO05D009587 4.0e-12 75.1 105 49.5
Lalb_Chr05g0229951 Lupinus albus HOM05D007510 ORTHO05D009587 4.0e-12 75.1 33 87.9
MD02G1136700 Malus domestica HOM05D007510 ORTHO05D000703 4.0e-12 75.1 34 88.2
Nitab4.5_0002266g0030 Nicotiana tabacum HOM05D007510 ORTHO05D009587 4.0e-12 75.1 68 54.4
Gohir.D03G011300 Gossypium hirsutum HOM05D007510 ORTHO05D009587 5.2e-12 74.7 105 49.5
Gorai.003G011700 Gossypium raimondii HOM05D007510 ORTHO05D009587 5.2e-12 74.7 105 49.5
SalBow5G2055 Salvia bowleyana HOM05D007510 ORTHO05D009587 5.2e-12 74.7 117 42.7
TWI09G1276 Tripterygium wilfordii HOM05D007510 ORTHO05D009587 5.2e-12 74.7 92 58.7
A02p04090 Brassica napus HOM05D007510 ORTHO05D009587 6.8e-12 74.3 69 55.1
ClCG01G020060 Citrullus lanatus HOM05D007510 ORTHO05D000703 6.8e-12 74.3 33 87.9
MELO3C007880.2 Cucumis melo HOM05D007510 ORTHO05D009587 6.8e-12 74.3 33 87.9
Duzib264G0517 Durio zibethinus HOM05D007510 ORTHO05D009587 6.8e-12 74.3 48 75.0
Thhalv10014934m.g Eutrema salsugineum HOM05D007510 ORTHO05D009587 6.8e-12 74.3 36 83.3
FAN28G2971 Fragaria x ananassa HOM05D007510 ORTHO05D009587 6.8e-12 74.3 36 83.3
Glyma.02G052200 Glycine max HOM05D007510 ORTHO05D009587 6.8e-12 74.3 44 75.0
Oeu037725.1 Olea europaea HOM05D007510 ORTHO05D009587 6.8e-12 74.3 103 41.7
Prupe.7G163800 Prunus persica HOM05D007510 ORTHO05D000703 8.8e-12 73.9 36 83.3
Ah.02g124790 Amaranthus hybridus HOM05D007510 ORTHO05D009587 1.2e-11 73.6 61 54.1
C09p59910 Brassica napus HOM05D007510 ORTHO05D009587 1.2e-11 73.6 98 44.9
BolC9t58827H Brassica oleracea HOM05D007510 ORTHO05D009587 1.2e-11 73.6 98 44.9
Ca_22347_v3 Cicer arietinum L. HOM05D007510 ORTHO05D009587 1.2e-11 73.6 40 77.5
Haze_03821 Corylus avellana HOM05D007510 ORTHO05D009587 1.2e-11 73.6 113 47.8
Sc16g0002400 Simmondsia chinensis HOM05D007510 ORTHO05D009587 1.2e-11 73.6 105 39.0
Thecc.01G024800 Theobroma cacao HOM05D007510 ORTHO05D009587 1.2e-11 73.6 36 86.1
VMungo0251G3154 Vigna mungo HOM05D007510 ORTHO05D009587 1.2e-11 73.6 44 72.7
CsaV3_6G046830 Cucumis sativus L. HOM05D007510 ORTHO05D009587 1.5e-11 73.2 95 46.3
SGA_v2.0_scaffold280G46849 Striga asiatica HOM05D007510 ORTHO05D009587 1.5e-11 73.2 34 88.2
BcaC03g18546 Brassica carinata HOM05D007510 ORTHO05D009587 2.0e-11 72.8 68 69.1
AT5G17280 Arabidopsis thaliana HOM05D007510 ORTHO05D009587 2.6e-11 72.4 50 66.0
BcaC04g18811 Brassica carinata HOM05D007510 ORTHO05D009587 2.6e-11 72.4 98 44.9
ECA232G0818 Erigeron canadensis HOM05D001094 ORTHO05D001050 2.6e-11 72.4 34 85.3
Solyc02g084650.3 Solanum lycopersicum HOM05D007510 ORTHO05D009587 2.6e-11 72.4 40 77.5
Sopen02g029320 Solanum pennellii HOM05D007510 ORTHO05D009587 2.6e-11 72.4 40 77.5
PGSC0003DMG400003618 Solanum tuberosum HOM05D007510 ORTHO05D009587 2.6e-11 72.4 40 77.5
CAN.G358.14 Capsicum annuum HOM05D007510 ORTHO05D009587 3.4e-11 72.0 76 51.3
Rhsim08G0036700 Rhododendron simsii HOM05D007510 ORTHO05D009587 3.4e-11 72.0 41 78.0
Sp6g26950 Schrenkiella parvula HOM05D007510 ORTHO05D009587 3.4e-11 72.0 70 50.0
BraA02t05372Z Brassica rapa HOM05D007510 ORTHO05D009587 4.4e-11 71.6 72 56.9
Cpa.g.sc6.200 Carica papaya HOM05D007510 ORTHO05D009587 4.4e-11 71.6 104 55.8
Psat4g096640 Pisum sativum HOM05D007510 ORTHO05D009587 4.4e-11 71.6 40 75.0
CANSAT78G1864 Cannabis sativa HOM05D007510 ORTHO05D009587 5.7e-11 71.2 40 75.0
Carub.0006s1547 Capsella rubella HOM05D007510 ORTHO05D009587 5.7e-11 71.2 39 71.8
vmacro22104 Vaccinium macrocarpon HOM05D007510 ORTHO05D009587 5.7e-11 71.2 44 72.7
CANSAT01G2887 Cannabis sativa HOM05D007510 ORTHO05D009587 7.5e-11 70.9 36 77.8
EL10As8g23866 Beta vulgaris HOM05D007510 ORTHO05D009587 9.8e-11 70.5 41 70.7
C02p08940 Brassica napus HOM05D007510 ORTHO05D009587 9.8e-11 70.5 31 90.3
BolC2t06803H Brassica oleracea HOM05D007510 ORTHO05D009587 9.8e-11 70.5 31 90.3
FAN26G1275 Fragaria x ananassa HOM05D007510 ORTHO05D009587 9.8e-11 70.5 36 80.6
Lj4g0024164 Lotus japonicus HOM05D007510 ORTHO05D009587 9.8e-11 70.5 38 73.7
Nitab4.5_0012525g0020 Nicotiana tabacum HOM05D007510 ORTHO05D009587 9.8e-11 70.5 55 58.2
AL6G28360 Arabidopsis lyrata HOM05D007510 ORTHO05D009587 1.3e-10 70.1 64 50.0
CSS0038414 Camellia sinensis var. sinensis HOM05D007510 ORTHO05D009587 1.3e-10 70.1 127 38.6
CARHR195940 Cardamine hirsuta HOM05D007510 ORTHO05D009587 1.3e-10 70.1 29 93.1
Sed0019199 Sechium edule HOM05D007510 ORTHO05D009587 1.3e-10 70.1 98 56.1
unitig_27.g25318 Utricularia gibba HOM05D007510 ORTHO05D009587 1.3e-10 70.1 48 64.6
arahy.Tifrunner.gnm1.ann1.X6BQPF Arachis hypogaea HOM05D007510 ORTHO05D009587 1.7e-10 69.7 40 70.0
Actinidia26112 Actinidia chinensis HOM05D007510 ORTHO05D009587 2.2e-10 69.3 34 82.4
Migut.H02491 Erythranthe guttata HOM05D007510 ORTHO05D009587 4.8e-10 68.2 115 40.0
FvH4_1g12420 Fragaria vesca HOM05D000116 ORTHO05D000703 6.3e-10 67.8 33 81.8
Nn6g32199 Nelumbo nucifera HOM05D007510 ORTHO05D009587 8.3e-10 67.4 45 62.2
SHI08591 Sapria himalayana HOM05D007510 ORTHO05D009587 8.3e-10 67.4 61 52.5
Os09g0530900 Oryza sativa ssp. japonica HOM05D007510 ORTHO05D009587 1.4e-09 66.6 38 71.1
Aqoxy1G00866 Aquilegia oxysepala HOM05D007510 ORTHO05D009587 2.4e-09 65.9 29 86.2
PGR102G2493 Punica granatum HOM05D007510 ORTHO05D009587 4.1e-09 65.1 39 64.1
Sc03g0003350 Simmondsia chinensis HOM05D007510 ORTHO05D009587 5.4e-09 64.7 42 66.7
CDE12G0095 Ceratophyllum demersum HOM05D007510 ORTHO05D009587 7.0e-09 64.3 40 72.5
SEGI_27269 Sequoiadendron giganteum HOM05D007510 ORTHO05D009587 9.1e-09 63.9 44 61.4
HPP92_022284 Vanilla planifolia HOM05D007510 ORTHO05D009587 9.1e-09 63.9 30 80.0
HPP92_022401 Vanilla planifolia HOM05D007510 ORTHO05D009587 9.1e-09 63.9 30 80.0
HPP92_028382 Vanilla planifolia HOM05D007510 ORTHO05D009587 9.1e-09 63.9 30 80.0
CDE04G3692 Ceratophyllum demersum HOM05D001179 ORTHO05D002194 1.2e-08 63.5 30 83.3
Zm00001eb319510 Zea mays HOM05D007510 ORTHO05D009587 1.2e-08 63.5 29 79.3
Nn5g29177 Nelumbo nucifera HOM05D007510 ORTHO05D009587 2.7e-08 62.4 72 41.7
ATR0661G079 Amborella trichopoda HOM05D007510 ORTHO05D009587 3.5e-08 62.0 30 73.3
AagrBONN_evm.TU.Sc2ySwM_368.2258 Anthoceros agrestis HOM05D007510 ORTHO05D009587 2.3e-07 59.3 30 76.7
AagrBONN_evm.TU.Sc2ySwM_228.2268 Anthoceros agrestis HOM05D007510 ORTHO05D009587 5.0e-07 58.2 52 48.1
Mapoly0025s0056 Marchantia polymorpha HOM05D007510 ORTHO05D009587 5.0e-07 58.2 36 58.3
AL6G28340 Arabidopsis lyrata HOM05D007510 ORTHO05D009587 1.9e-06 56.2 36 69.4


User provided reference genes

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