Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.02G167801 Manihot esculenta HOM05D009888 ORTHO05D001895 8.0e-70 266.9 131 100.0
Sabra03G0006600 Salix brachista HOM05D009888 ORTHO05D001895 8.1e-22 107.5 125 46.4
Manes.10G125112 Manihot esculenta HOM05D009888 ORTHO05D001895 6.9e-21 104.4 124 43.5
Sabra03G0007500 Salix brachista HOM05D009888 ORTHO05D001895 9.0e-21 104.0 123 45.5
Potri.003G021250 Populus trichocarpa HOM05D009888 ORTHO05D001895 1.2e-20 103.6 122 45.1
Potri.003G013026 Populus trichocarpa HOM05D009888 ORTHO05D001895 1.5e-20 103.2 122 44.3
Manes.10G121100 Manihot esculenta HOM05D009888 ORTHO05D001895 2.0e-20 102.8 124 42.7
Potri.003G011875 Populus trichocarpa HOM05D009888 ORTHO05D001895 4.5e-20 101.7 121 46.3
Potri.003G016733 Populus trichocarpa HOM05D009888 ORTHO05D001895 2.2e-19 99.4 117 43.6
Sabra03G0007700 Salix brachista HOM05D009888 ORTHO05D001895 3.2e-18 95.5 121 43.0
Sabra03G0006900 Salix brachista HOM05D009888 ORTHO05D001895 5.5e-18 94.7 122 42.6
Potri.003G014750 Populus trichocarpa HOM05D009888 ORTHO05D001895 7.1e-18 94.4 121 43.0
Potri.003G013601 Populus trichocarpa HOM05D009888 ORTHO05D001895 1.9e-15 86.3 94 45.7
Sabra03G0007300 Salix brachista HOM05D009888 ORTHO05D001895 2.5e-15 85.9 121 40.5
Sabra03G0007600 Salix brachista HOM05D009888 ORTHO05D001895 3.3e-15 85.5 123 40.7
Manes.07G019800 Manihot esculenta HOM05D009888 ORTHO05D001895 4.3e-15 85.1 122 39.3
Manes.07G019700 Manihot esculenta HOM05D009888 ORTHO05D001895 5.7e-15 84.7 118 40.7
Sabra03G0007200 Salix brachista HOM05D009888 ORTHO05D001895 5.7e-15 84.7 121 41.3
Sabra03G0007000 Salix brachista HOM05D009888 ORTHO05D001895 1.3e-14 83.6 123 39.8
Manes.10G121200 Manihot esculenta HOM05D009888 ORTHO05D001895 1.8e-13 79.7 75 52.0
Potri.004G220100 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.9e-10 69.7 103 38.8
Potri.011G006050 Populus trichocarpa HOM05D008886 ORTHO05D001895 3.2e-10 68.9 93 41.9
Gohir.A13G015300 Gossypium hirsutum HOM05D002599 ORTHO05D001895 5.5e-10 68.2 111 34.2
Gohir.D13G016500 Gossypium hirsutum HOM05D002599 ORTHO05D001895 5.5e-10 68.2 111 34.2
Gorai.013G018200 Gossypium raimondii HOM05D002599 ORTHO05D001895 5.5e-10 68.2 111 34.2
Potri.004G219450 Populus trichocarpa HOM05D002599 ORTHO05D001895 5.5e-10 68.2 113 35.4
Thecc.02G027800 Theobroma cacao HOM05D002599 ORTHO05D001895 1.2e-09 67.0 122 35.2
Potri.004G011000 Populus trichocarpa HOM05D008886 ORTHO05D001895 2.7e-09 65.9 101 39.6
Potri.011G005601 Populus trichocarpa HOM05D008886 ORTHO05D001895 4.6e-09 65.1 93 40.9
COL.COLO4_25714 Corchorus olitorius HOM05D002599 ORTHO05D001895 7.9e-09 64.3 111 32.4
Potri.011G005300 Populus trichocarpa HOM05D008886 ORTHO05D001895 7.9e-09 64.3 93 38.7
Sabra01G0167700 Salix brachista HOM05D008886 ORTHO05D001895 7.9e-09 64.3 120 36.7
Gohir.A13G036650 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.0e-08 63.9 135 32.6
Thecc.02G091100 Theobroma cacao HOM05D002599 ORTHO05D001895 1.0e-08 63.9 123 35.8
Sabra01G0167100 Salix brachista HOM05D008886 ORTHO05D001895 2.3e-08 62.8 106 39.6
Manes.07G021000 Manihot esculenta HOM05D016843 ORTHO05D001895 3.0e-08 62.4 128 30.5
Thecc.10G017900 Theobroma cacao HOM05D002599 ORTHO05D001895 3.0e-08 62.4 123 30.9
Potri.004G219900 Populus trichocarpa HOM05D002599 ORTHO05D001895 3.9e-08 62.0 119 35.3
Potri.004G221600 Populus trichocarpa HOM05D008886 ORTHO05D001895 3.9e-08 62.0 115 36.5
Thecc.02G092100 Theobroma cacao HOM05D002599 ORTHO05D001895 3.9e-08 62.0 124 33.1
Sabra11G0004000 Salix brachista HOM05D008886 ORTHO05D001895 5.1e-08 61.6 93 39.8
Sabra11G0004100 Salix brachista HOM05D008886 ORTHO05D001895 5.1e-08 61.6 93 39.8
Sabra11G0004600 Salix brachista HOM05D008886 ORTHO05D001895 5.1e-08 61.6 93 39.8
Gohir.A01G005400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.1e-07 60.5 132 33.3
Potri.003G011132 Populus trichocarpa HOM05D002599 ORTHO05D001895 3.3e-07 58.9 112 32.1
Potri.015G016450 Populus trichocarpa HOM05D002599 ORTHO05D001895 4.3e-07 58.5 74 40.5
Gorai.002G006400 Gossypium raimondii HOM05D002599 ORTHO05D001895 5.7e-07 58.2 132 32.6
Gohir.D01G005500 Gossypium hirsutum HOM05D002599 ORTHO05D001895 7.4e-07 57.8 132 32.6
Sabra11G0004200 Salix brachista HOM05D008886 ORTHO05D001895 7.4e-07 57.8 93 37.6
Sabra11G0004400 Salix brachista HOM05D008886 ORTHO05D001895 7.4e-07 57.8 93 37.6
Sabra11G0004500 Salix brachista HOM05D008886 ORTHO05D001895 7.4e-07 57.8 93 37.6
Sabra11G0004900 Salix brachista HOM05D008886 ORTHO05D001895 7.4e-07 57.8 93 37.6
Sabra11G0005300 Salix brachista HOM05D008886 ORTHO05D001895 7.4e-07 57.8 93 37.6
Sabra11G0005100 Salix brachista HOM05D008886 ORTHO05D001895 9.7e-07 57.4 93 37.6
Sabra09G0045600 Salix brachista HOM05D008886 ORTHO05D001895 1.3e-06 57.0 118 33.1
Sabra11G0004300 Salix brachista HOM05D008886 ORTHO05D001895 2.8e-06 55.8 93 37.6
Potri.003G010700 Populus trichocarpa HOM05D002599 ORTHO05D001895 3.7e-06 55.5 112 30.4
COL.COLO4_11745 Corchorus olitorius HOM05D002599 ORTHO05D001895 4.8e-06 55.1 74 39.2
Thecc.07G108500 Theobroma cacao HOM05D009888 ORTHO05D001895 4.8e-06 55.1 88 36.4
Sabra03G0006400 Salix brachista HOM05D002599 ORTHO05D001895 6.3e-06 54.7 119 31.1
Potri.011G005400 Populus trichocarpa HOM05D008886 ORTHO05D001895 8.2e-06 54.3 107 33.6
Potri.011G005500 Populus trichocarpa HOM05D008886 ORTHO05D001895 8.2e-06 54.3 105 32.4


User provided reference genes

Program Settings