Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.02G166200 Manihot esculenta HOM05D005772 ORTHO05D006468 3.1e-142 508.4 257 100.0
Potri.005G180400 Populus trichocarpa HOM05D005772 ORTHO05D006468 1.2e-61 240.7 234 57.7
Thecc.08G129200 Theobroma cacao HOM05D005772 ORTHO05D006468 2.8e-58 229.6 236 54.7
Duzib093G1216 Durio zibethinus HOM05D005772 ORTHO05D006468 6.9e-57 224.9 239 53.1
TAR628G1655 Trochodendron aralioides HOM05D005772 ORTHO05D006468 6.9e-57 224.9 235 53.2
Nn5g28367 Nelumbo nucifera HOM05D005772 ORTHO05D006468 2.2e-55 219.9 236 53.4
QL09p033796 Quercus lobata HOM05D005772 ORTHO05D006468 3.0e-52 209.5 238 52.5
Gohir.D05G239100 Gossypium hirsutum HOM05D005772 ORTHO05D006468 1.5e-51 207.2 241 49.4
Ciclev10003748m.g Citrus clementina HOM05D005772 ORTHO05D006468 1.9e-51 206.8 232 54.3
CiPaw.16G025800 Carya illinoinensis HOM05D005772 ORTHO05D006468 7.4e-51 204.9 234 50.4
Gohir.A05G237000 Gossypium hirsutum HOM05D005772 ORTHO05D006468 5.3e-49 198.7 241 47.7
Gorai.009G247900 Gossypium raimondii HOM05D005772 ORTHO05D006468 1.2e-48 197.6 241 47.3
MBI06_g44579_MAGBIO Magnolia biondii HOM05D005772 ORTHO05D006468 9.9e-48 194.5 230 51.7
Actinidia15231 Actinidia chinensis HOM05D005772 ORTHO05D006468 3.2e-46 189.5 233 48.1
Phvul.007G102200 Phaseolus vulgaris HOM05D005772 ORTHO05D006468 3.2e-46 189.5 249 46.2
Glyma.04G249200 Glycine max HOM05D005772 ORTHO05D006468 2.7e-45 186.4 248 43.5
VMungo1309G2764 Vigna mungo HOM05D005772 ORTHO05D006468 3.5e-45 186.0 242 46.7
Cpa.g.sc64.117 Carica papaya HOM05D005772 ORTHO05D006468 4.8e-42 175.6 232 46.1
Psat5g087080 Pisum sativum HOM05D005772 ORTHO05D006468 4.8e-42 175.6 245 42.4
Hma1.2p1_0612F.1_g188830 Hydrangea macrophylla HOM05D005772 ORTHO05D006468 1.4e-41 174.1 239 47.3
TPR.G21059 Trifolium pratense HOM05D005772 ORTHO05D006468 1.4e-41 174.1 253 44.3
Actinidia21305 Actinidia chinensis HOM05D005772 ORTHO05D006468 1.8e-41 173.7 230 46.1
Lj1g0001548 Lotus japonicus HOM05D005772 ORTHO05D006468 1.8e-41 173.7 249 43.4
PGR042G3290 Punica granatum HOM05D005772 ORTHO05D006468 1.8e-41 173.7 232 46.6
Lalb_Chr08g0241421 Lupinus albus HOM05D005772 ORTHO05D006468 5.3e-41 172.2 253 43.9
GSVIVG01008837001 Vitis vinifera HOM05D005772 ORTHO05D006468 5.3e-41 172.2 172 56.4
DCAR_003562 Daucus carota HOM05D005772 ORTHO05D006468 1.2e-40 171.0 238 45.4
Aqoxy6G00258 Aquilegia oxysepala HOM05D005772 ORTHO05D006468 1.5e-40 170.6 212 46.7
Glyma.06G113802 Glycine max HOM05D005772 ORTHO05D006468 3.4e-40 169.5 282 39.0
arahy.Tifrunner.gnm1.ann1.AWF3QX Arachis hypogaea HOM05D005772 ORTHO05D006468 4.9e-39 165.6 240 42.5
Phvul.009G125600 Phaseolus vulgaris HOM05D005772 ORTHO05D006468 8.4e-39 164.9 187 48.1
CSS0028957 Camellia sinensis var. sinensis HOM05D005772 ORTHO05D006468 5.5e-38 162.2 196 50.0
CsaV3_4G028090 Cucumis sativus L. HOM05D005772 ORTHO05D006468 7.1e-38 161.8 237 40.1
SGA_v2.0_scaffold52G18944 Striga asiatica HOM05D005772 ORTHO05D006468 2.7e-37 159.8 239 43.9
Nitab4.5_0000111g0180 Nicotiana tabacum HOM05D005772 ORTHO05D006468 3.5e-37 159.5 236 43.2
MELO3C010502.2 Cucumis melo HOM05D005772 ORTHO05D006468 4.6e-37 159.1 237 40.9
arahy.Tifrunner.gnm1.ann1.B1JKF4 Arachis hypogaea HOM05D005772 ORTHO05D006468 3.0e-36 156.4 214 44.9
THA.LOC104800210 Tarenaya hassleriana HOM05D005772 ORTHO05D006468 3.0e-36 156.4 230 45.2
AL1G34900 Arabidopsis lyrata HOM05D005772 ORTHO05D006468 1.1e-35 154.5 232 41.4
Cc10_g12210 Coffea canephora HOM05D005772 ORTHO05D006468 2.5e-35 153.3 231 39.8
Migut.C01111 Erythranthe guttata HOM05D005772 ORTHO05D006468 5.7e-35 152.1 244 42.6
Thhalv10008678m.g Eutrema salsugineum HOM05D005772 ORTHO05D006468 7.4e-35 151.8 234 39.7
Carub.0001s2117 Capsella rubella HOM05D005772 ORTHO05D006468 9.7e-35 151.4 232 39.7
CANSAT64G1440 Cannabis sativa HOM05D005772 ORTHO05D006468 2.1e-34 150.2 249 43.4
Sabra05G0136400 Salix brachista HOM05D005772 ORTHO05D006468 2.8e-34 149.8 173 56.1
AT1G21722 Arabidopsis thaliana HOM05D005772 ORTHO05D006468 4.8e-34 149.1 242 39.3
MSTRG.1426 Avicennia marina HOM05D005772 ORTHO05D006468 8.2e-34 148.3 244 40.2
ClCG11G015880 Citrullus lanatus HOM05D005772 ORTHO05D006468 1.1e-33 147.9 237 38.8
Migut.E01717 Erythranthe guttata HOM05D005772 ORTHO05D006468 1.4e-33 147.5 238 43.3
BcaC05g26092 Brassica carinata HOM05D005772 ORTHO05D006468 1.8e-33 147.1 227 41.9
CARHR022100 Cardamine hirsuta HOM05D005772 ORTHO05D006468 2.4e-33 146.7 231 38.5
Dinv27285 Davidia involucrata HOM05D005772 ORTHO05D006468 3.1e-33 146.4 226 45.1
Migut.E00857 Erythranthe guttata HOM05D005772 ORTHO05D006468 5.3e-33 145.6 238 42.9
Nitab4.5_0004208g0030 Nicotiana tabacum HOM05D005772 ORTHO05D006468 4.5e-32 142.5 233 42.5
A06p17810 Brassica napus HOM05D005772 ORTHO05D006468 5.9e-32 142.1 226 38.9
Atru.chr13.1514 Acer truncatum HOM05D005772 ORTHO05D006468 1.3e-28 131.0 185 47.6
A07p14940 Brassica napus HOM05D005772 ORTHO05D006468 1.8e-28 130.6 226 37.6
SGA_v2.0_scaffold52G18951 Striga asiatica HOM05D005772 ORTHO05D006468 3.9e-28 129.4 210 42.9
Lj4A634T17 Lonicera japonica HOM05D005772 ORTHO05D006468 1.5e-27 127.5 206 43.7
Oeu009481.1 Olea europaea HOM05D005772 ORTHO05D006468 2.5e-27 126.7 246 39.8
Solyc11g017475.1 Solanum lycopersicum HOM05D005772 ORTHO05D006468 1.2e-24 117.9 241 38.2
Potri.007G001400 Populus trichocarpa HOM05D005772 ORTHO05D006468 4.5e-24 115.9 245 32.7
Aa31LG7G5690 Aethionema arabicum HOM05D002121 ORTHO05D004000 5.9e-24 115.5 231 35.9
Cfa003428 Carpinus fangiana HOM05D005772 ORTHO05D006468 2.5e-22 110.2 145 44.1
CSS0023973 Camellia sinensis var. sinensis HOM05D005772 ORTHO05D006468 3.2e-22 109.8 166 39.2
SGA_v2.0_scaffold24G10436 Striga asiatica HOM05D002121 ORTHO05D004000 9.4e-22 108.2 206 37.9
TWI18G0423 Tripterygium wilfordii HOM05D005772 ORTHO05D006468 2.1e-21 107.1 191 38.2
BcaB07g32170 Brassica carinata HOM05D005772 ORTHO05D006468 2.7e-21 106.7 198 36.9
PGR031G3661 Punica granatum HOM05D005772 ORTHO05D006468 2.7e-21 106.7 234 31.6
QL06p046996 Quercus lobata HOM05D005772 ORTHO05D006468 2.7e-21 106.7 221 34.8
Thecc.06G054300 Theobroma cacao HOM05D005772 ORTHO05D006468 2.7e-21 106.7 128 41.4
CiPaw.01G207400 Carya illinoinensis HOM05D005772 ORTHO05D006468 7.9e-21 105.1 183 40.4
TAR625G1307 Trochodendron aralioides HOM05D005772 ORTHO05D006468 7.9e-21 105.1 180 41.7
C05p20700 Brassica napus HOM05D005772 ORTHO05D006468 1.0e-20 104.8 199 35.7
Sabra07G0001200 Salix brachista HOM05D005772 ORTHO05D006468 1.8e-20 104.0 219 37.4
Potri.007G001650 Populus trichocarpa HOM05D005772 ORTHO05D006468 2.3e-20 103.6 122 43.4
Aqoxy2G03016 Aquilegia oxysepala HOM05D005772 ORTHO05D006468 3.0e-20 103.2 181 36.5
Ciclev10013938m.g Citrus clementina HOM05D005772 ORTHO05D006468 3.0e-20 103.2 216 33.8
Ciclev10013939m.g Citrus clementina HOM05D005772 ORTHO05D006468 3.0e-20 103.2 216 33.8
FAN09G4514 Fragaria x ananassa HOM05D005772 ORTHO05D006468 1.5e-19 100.9 229 35.4
CiPaw.02G128300 Carya illinoinensis HOM05D005772 ORTHO05D006468 2.6e-19 100.1 177 38.4
Nn8g41076 Nelumbo nucifera HOM05D005772 ORTHO05D006468 3.3e-19 99.8 187 34.2
MBI06_g27497_MAGBIO Magnolia biondii HOM05D005772 ORTHO05D006468 4.4e-19 99.4 140 42.1
Ciclev10013941m.g Citrus clementina HOM05D005772 ORTHO05D006468 5.7e-19 99.0 216 32.4
FAN14G5951 Fragaria x ananassa HOM05D005772 ORTHO05D006468 7.4e-19 98.6 224 33.9
Rhsim08G0251400 Rhododendron simsii HOM05D000927 ORTHO05D000850 2.2e-18 97.1 141 39.0
CSS0004874 Camellia sinensis var. sinensis HOM05D005772 ORTHO05D006468 2.8e-18 96.7 180 35.6
CANSAT01G3073 Cannabis sativa HOM05D005772 ORTHO05D006468 3.7e-18 96.3 108 41.7
GSVIVG01029533001 Vitis vinifera HOM05D005956 ORTHO05D007197 4.8e-18 95.9 155 37.4
Lj3g0026748 Lotus japonicus HOM05D005772 ORTHO05D006468 6.3e-18 95.5 222 34.2
AT1G78922 Arabidopsis thaliana HOM05D005772 ORTHO05D006468 8.2e-18 95.1 141 36.9
RcHm_v2.0_Chr2g0149081 Rosa chinensis HOM05D005772 ORTHO05D006468 8.2e-18 95.1 225 36.4
PSO063G1689 Papaver somniferum HOM05D005772 ORTHO05D006468 1.1e-17 94.7 178 36.5
FAN02G1413 Fragaria x ananassa HOM05D005772 ORTHO05D006468 1.8e-17 94.0 224 33.5
HPP92_009982 Vanilla planifolia HOM05D005772 ORTHO05D006468 1.8e-17 94.0 211 33.6
MD04G1024200 Malus domestica HOM05D005772 ORTHO05D006468 5.3e-17 92.4 230 33.5
PSO170G5960 Papaver somniferum HOM05D005772 ORTHO05D006468 9.1e-17 91.7 165 34.5
Prupe.3G025100 Prunus persica HOM05D005772 ORTHO05D006468 9.1e-17 91.7 228 33.3
Oeu038376.1 Olea europaea HOM05D005772 ORTHO05D006468 1.5e-16 90.9 176 34.1
Aa31LG4G2060 Aethionema arabicum HOM05D005772 ORTHO05D006468 7.7e-16 88.6 198 33.8
vmacro10401 Vaccinium macrocarpon HOM05D005772 ORTHO05D006468 2.2e-15 87.0 217 29.0
Carub.0002s2577 Capsella rubella HOM05D005772 ORTHO05D006468 2.9e-15 86.7 138 34.8
CARHR072530 Cardamine hirsuta HOM05D005772 ORTHO05D006468 6.5e-15 85.5 192 33.9
BcaC08g45402 Brassica carinata HOM05D007236 ORTHO05D009150 8.5e-15 85.1 142 37.3
C06p30330 Brassica napus HOM05D005772 ORTHO05D006468 8.5e-15 85.1 142 37.3
BolC6t38196H Brassica oleracea HOM05D005772 ORTHO05D006468 8.5e-15 85.1 142 37.3
Rhsim06G0101700 Rhododendron simsii HOM05D005772 ORTHO05D006468 8.5e-15 85.1 158 40.5
SalBow5G3743 Salvia bowleyana HOM05D005772 ORTHO05D006468 1.9e-14 84.0 234 30.8
Haze_17513 Corylus avellana HOM05D000187 ORTHO05D000926 4.2e-14 82.8 228 33.8
A07p27410 Brassica napus HOM05D005772 ORTHO05D006468 5.5e-14 82.4 188 35.1
Medtr0032s0080 Medicago truncatula HOM05D005772 ORTHO05D006468 9.4e-14 81.6 217 30.4
AL2G39360 Arabidopsis lyrata HOM05D005772 ORTHO05D006468 1.6e-13 80.9 98 38.8
Lsat_1_v5_gn_8_150021 Lactuca sativa HOM05D041600 ORTHO05D006468 3.6e-13 79.7 163 38.7
BraA07t30382Z Brassica rapa HOM05D005772 ORTHO05D006468 6.1e-13 79.0 205 33.7
unitig_22.g6227 Utricularia gibba HOM05D005772 ORTHO05D006468 1.8e-12 77.4 65 52.3
SalBow5G0344 Salvia bowleyana HOM05D005772 ORTHO05D006468 2.3e-12 77.0 234 30.8
SalBow8G0153 Salvia bowleyana HOM05D005772 ORTHO05D006468 2.3e-12 77.0 232 32.3
Solyc11g018470.3 Solanum lycopersicum HOM05D005772 ORTHO05D006468 3.0e-12 76.6 180 35.0
Sed0012770 Sechium edule HOM05D005772 ORTHO05D006468 3.9e-12 76.3 175 32.0
BcaB02g07187 Brassica carinata HOM05D005772 ORTHO05D006468 6.7e-12 75.5 202 31.7
SGA_v2.0_scaffold2751G54198 Striga asiatica HOM05D005772 ORTHO05D006468 6.7e-12 75.5 128 41.4
Sp5g33960 Schrenkiella parvula HOM05D005772 ORTHO05D006468 4.4e-11 72.8 196 32.7
TPR.G38724 Trifolium pratense HOM05D003324 ORTHO05D006468 5.7e-11 72.4 150 39.3
Nitab4.5_0003012g0080 Nicotiana tabacum HOM05D005772 ORTHO05D006468 1.7e-10 70.9 50 68.0
Manes.14G007000 Manihot esculenta HOM05D005772 ORTHO05D006468 2.4e-09 67.0 220 30.9
ATR0709G081 Amborella trichopoda HOM05D005772 ORTHO05D006468 4.1e-09 66.2 191 29.8
SHI31127 Sapria himalayana HOM05D005772 ORTHO05D006468 7.7e-08 62.0 310 24.2
Zm00001eb215960 Zea mays HOM05D046982 ORTHO05D006468 1.3e-07 61.2 197 27.4
Eucgr.A00749 Eucalyptus grandis HOM05D005772 ORTHO05D006468 3.2e-06 56.6 159 35.8
THA.LOC104813627 Tarenaya hassleriana HOM05D005772 ORTHO05D006468 3.2e-06 56.6 251 27.1


User provided reference genes

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