Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.02G164400 Manihot esculenta HOM05D006264 ORTHO05D007739 5.4e-192 674.1 323 100.0
Potri.005G178600 Populus trichocarpa HOM05D006264 ORTHO05D007739 1.2e-162 576.6 323 84.8
Potri.002G082500 Populus trichocarpa HOM05D006264 ORTHO05D007739 5.8e-162 574.3 323 84.2
Thecc.08G126800 Theobroma cacao HOM05D006264 ORTHO05D007739 1.1e-152 543.5 328 77.7
Prupe.1G494700 Prunus persica HOM05D006264 ORTHO05D007739 1.8e-150 536.2 328 75.3
COL.COLO4_04990 Corchorus olitorius HOM05D006264 ORTHO05D007739 4.3e-149 531.6 328 75.3
VMungo1309G2910 Vigna mungo HOM05D006264 ORTHO05D007739 1.3e-148 530.0 326 75.5
Ciclev10001823m.g Citrus clementina HOM05D006264 ORTHO05D007739 1.6e-148 529.6 328 74.1
MD15G1347000 Malus domestica HOM05D006264 ORTHO05D007739 1.1e-147 526.9 328 73.8
Gohir.D06G045800 Gossypium hirsutum HOM05D006264 ORTHO05D007739 1.8e-147 526.2 317 78.2
Gorai.010G051000 Gossypium raimondii HOM05D006264 ORTHO05D007739 1.8e-147 526.2 317 78.2
FAN15G0088 Fragaria x ananassa HOM05D006264 ORTHO05D007739 3.1e-147 525.4 329 74.5
MELO3C010482.2 Cucumis melo HOM05D006264 ORTHO05D007739 5.3e-147 524.6 328 73.2
Glyma.06G115200 Glycine max HOM05D006264 ORTHO05D007739 9.0e-147 523.9 327 74.0
CsaV3_4G028200 Cucumis sativus L. HOM05D006264 ORTHO05D007739 1.5e-146 523.1 328 72.9
Phvul.009G127300 Phaseolus vulgaris HOM05D006264 ORTHO05D007739 2.0e-146 522.7 326 73.9
FAN20G0424 Fragaria x ananassa HOM05D006264 ORTHO05D007739 2.6e-146 522.3 329 74.2
Lj1g0001411 Lotus japonicus HOM05D006264 ORTHO05D007739 2.6e-146 522.3 326 73.9
FAN24G2929 Fragaria x ananassa HOM05D006264 ORTHO05D007739 5.8e-146 521.2 327 74.0
RcHm_v2.0_Chr6g0295971 Rosa chinensis HOM05D006264 ORTHO05D007739 5.8e-146 521.2 328 74.1
CANSAT11G2315 Cannabis sativa HOM05D006264 ORTHO05D007739 7.6e-146 520.8 328 74.4
QL09p034323 Quercus lobata HOM05D006264 ORTHO05D007739 7.6e-146 520.8 327 73.1
Oeu040415.1 Olea europaea HOM05D006264 ORTHO05D007739 9.9e-146 520.4 328 72.9
Medtr3g088580 Medicago truncatula HOM05D006264 ORTHO05D007739 1.3e-145 520.0 326 72.7
Lalb_Chr11g0066051 Lupinus albus HOM05D006264 ORTHO05D007739 2.2e-145 519.2 327 73.1
Sed0004807 Sechium edule HOM05D006264 ORTHO05D007739 2.2e-145 519.2 328 73.2
Actinidia29470 Actinidia chinensis HOM05D006264 ORTHO05D007739 3.8e-145 518.5 328 72.0
PGR044G1646 Punica granatum HOM05D006264 ORTHO05D007739 3.8e-145 518.5 328 74.7
Glyma.04G247500 Glycine max HOM05D006264 ORTHO05D007739 4.9e-145 518.1 327 73.7
Ca_27657_v3 Cicer arietinum L. HOM05D006264 ORTHO05D007739 8.4e-145 517.3 327 73.1
CSS0035031 Camellia sinensis var. sinensis HOM05D006264 ORTHO05D007739 1.1e-144 516.9 328 72.3
MSTRG.1441 Avicennia marina HOM05D006264 ORTHO05D007739 1.4e-144 516.5 328 72.3
Nn1g08814 Nelumbo nucifera HOM05D006264 ORTHO05D007739 1.9e-144 516.2 328 73.2
arahy.Tifrunner.gnm1.ann1.YYE7NP Arachis hypogaea HOM05D006264 ORTHO05D007739 3.2e-144 515.4 327 71.3
Dinv27304 Davidia involucrata HOM05D006264 ORTHO05D007739 5.5e-144 514.6 328 71.0
arahy.Tifrunner.gnm1.ann1.W8H4W4 Arachis hypogaea HOM05D006264 ORTHO05D007739 1.6e-143 513.1 327 70.9
Eucgr.F04347 Eucalyptus grandis HOM05D006264 ORTHO05D007739 1.6e-143 513.1 328 74.1
Lj4C628G13 Lonicera japonica HOM05D006264 ORTHO05D007739 1.6e-143 513.1 329 71.7
CiPaw.05G220800 Carya illinoinensis HOM05D006264 ORTHO05D007739 2.7e-143 512.3 328 73.2
TWI60G1034 Tripterygium wilfordii HOM05D006264 ORTHO05D007739 3.5e-143 511.9 327 73.7
Lalb_Chr08g0241301 Lupinus albus HOM05D006264 ORTHO05D007739 1.0e-142 510.4 328 71.0
TAR381G1225 Trochodendron aralioides HOM05D006264 ORTHO05D007739 1.8e-142 509.6 328 72.3
Cc10_g12020 Coffea canephora HOM05D006264 ORTHO05D007739 8.7e-142 507.3 328 71.3
Solyc11g012830.3 Solanum lycopersicum HOM05D006264 ORTHO05D007739 7.4e-141 504.2 328 70.4
PGSC0003DMG400000884 Solanum tuberosum HOM05D006264 ORTHO05D007739 3.7e-140 501.9 328 70.7
TAR625G1219 Trochodendron aralioides HOM05D006264 ORTHO05D007739 3.7e-140 501.9 328 72.0
Nitab4.5_0001996g0020 Nicotiana tabacum HOM05D006264 ORTHO05D007739 4.8e-140 501.5 325 70.5
Sc02g0005000 Simmondsia chinensis HOM05D006264 ORTHO05D007739 2.4e-139 499.2 328 71.0
CAN.G2.26 Capsicum annuum HOM05D006264 ORTHO05D007739 4.0e-139 498.4 325 70.2
FvH4_2g27090 Fragaria vesca HOM05D006264 ORTHO05D007739 9.0e-139 497.3 325 70.8
TPR.G13464 Trifolium pratense HOM05D006264 ORTHO05D007739 9.0e-139 497.3 327 70.6
THA.LOC104810199 Tarenaya hassleriana HOM05D006264 ORTHO05D007739 2.6e-138 495.7 329 70.8
Haze_00430 Corylus avellana HOM05D006264 ORTHO05D007739 6.5e-137 491.1 341 69.8
AT1G21760 Arabidopsis thaliana HOM05D006264 ORTHO05D007739 8.4e-137 490.7 330 69.1
Hund17298 Selenicereus undatus HOM05D006264 ORTHO05D007739 8.4e-137 490.7 326 70.9
HanXRQChr05g0151071 Helianthus annuus HOM05D006264 ORTHO05D007739 1.4e-136 490.0 328 67.7
arahy.Tifrunner.gnm1.ann1.9W7Z3M Arachis hypogaea HOM05D006264 ORTHO05D007739 2.5e-136 489.2 335 68.1
Sabra02G0064700 Salix brachista HOM05D006264 ORTHO05D007739 3.2e-136 488.8 323 75.2
Sp1g19320 Schrenkiella parvula HOM05D006264 ORTHO05D007739 4.2e-136 488.4 330 69.4
CARHR022150 Cardamine hirsuta HOM05D006264 ORTHO05D007739 9.3e-136 487.3 330 69.4
ClCG11G015780 Citrullus lanatus HOM05D006264 ORTHO05D007739 9.3e-136 487.3 308 71.8
Aa31LG7G5740 Aethionema arabicum HOM05D006264 ORTHO05D007739 1.0e-134 483.8 330 69.1
BcaB07g32175 Brassica carinata HOM05D006264 ORTHO05D007739 1.8e-134 483.0 330 68.5
vmacro00839 Vaccinium macrocarpon HOM05D006264 ORTHO05D007739 3.0e-134 482.3 328 69.8
EL10Ac1g01023 Beta vulgaris HOM05D006264 ORTHO05D007739 5.1e-134 481.5 328 69.8
Aqoxy6G00234 Aquilegia oxysepala HOM05D006264 ORTHO05D007739 6.7e-134 481.1 318 70.1
BcaC05g26098 Brassica carinata HOM05D006264 ORTHO05D007739 1.1e-133 480.3 330 68.5
Rhsim11G0069200 Rhododendron simsii HOM05D006264 ORTHO05D007739 1.1e-133 480.3 331 67.7
Duzib093G0816 Durio zibethinus HOM05D006264 ORTHO05D007739 3.3e-133 478.8 328 71.3
GSVIVG01008855001 Vitis vinifera HOM05D006264 ORTHO05D007739 7.4e-133 477.6 323 72.1
A06p17870 Brassica napus HOM05D006264 ORTHO05D007739 1.3e-132 476.9 346 65.9
BraA06t24877Z Brassica rapa HOM05D006264 ORTHO05D007739 2.8e-132 475.7 338 66.6
Migut.C01127 Erythranthe guttata HOM05D006264 ORTHO05D007739 2.8e-132 475.7 328 68.9
Carub.0001s2122 Capsella rubella HOM05D006264 ORTHO05D007739 3.7e-132 475.3 330 67.9
MBI16_g07653_MAGBIO Magnolia biondii HOM05D006264 ORTHO05D007739 1.1e-131 473.8 328 67.4
BolC5t30776H Brassica oleracea HOM05D006264 ORTHO05D007739 1.8e-131 473.0 335 66.9
SGA_v2.0_scaffold24G10459 Striga asiatica HOM05D006264 ORTHO05D007739 1.8e-131 473.0 328 68.0
CDE02G1850 Ceratophyllum demersum HOM05D006264 ORTHO05D007739 2.9e-129 465.7 328 64.3
AUR62019071 Chenopodium quinoa HOM05D006264 ORTHO05D007739 8.5e-129 464.2 326 67.2
AUR62014328 Chenopodium quinoa HOM05D006264 ORTHO05D007739 1.4e-128 463.4 326 66.9
PSO170G1538 Papaver somniferum HOM05D006264 ORTHO05D007739 5.5e-128 461.5 328 65.2
Peaxi162Scf00914g00315 Petunia axillaris HOM05D006264 ORTHO05D007739 9.3e-128 460.7 310 68.4
PSO528G0109 Papaver somniferum HOM05D006264 ORTHO05D007739 1.3e-126 456.8 328 64.3
PSO063G0125 Papaver somniferum HOM05D006264 ORTHO05D007739 8.7e-126 454.1 328 64.0
C05p20770 Brassica napus HOM05D006264 ORTHO05D007739 1.1e-125 453.8 320 65.9
Lsat_1_v5_gn_6_112861 Lactuca sativa HOM05D006264 ORTHO05D007739 2.8e-124 449.1 326 64.4
Nitab4.5_0001803g0010 Nicotiana tabacum HOM05D006264 ORTHO05D007739 1.3e-121 440.3 312 66.3
ATR0584G291 Amborella trichopoda HOM05D006264 ORTHO05D007739 3.8e-121 438.7 315 64.8
HPP92_004401 Vanilla planifolia HOM05D006264 ORTHO05D007739 1.2e-114 417.2 325 60.6
HPP92_027807 Vanilla planifolia HOM05D006264 ORTHO05D007739 3.4e-114 415.6 325 60.3
Zm00001eb422580 Zea mays HOM05D006264 ORTHO05D007739 4.2e-112 408.7 328 57.9
QL09p034368 Quercus lobata HOM05D006264 ORTHO05D007739 9.4e-112 407.5 253 73.5
Pp3c3_38060 Physcomitrium patens HOM05D006264 ORTHO05D007739 6.7e-110 401.4 306 62.1
SMO347G0097 Selaginella moellendorffii HOM05D006264 ORTHO05D007739 5.7e-109 398.3 309 60.5
ECA246G2185 Erigeron canadensis HOM05D006264 ORTHO05D007739 2.8e-108 396.0 277 64.6
Gohir.A06G045300 Gossypium hirsutum HOM05D006264 ORTHO05D007739 1.8e-107 393.3 241 74.7
Thhalv10008543m.g Eutrema salsugineum HOM05D006264 ORTHO05D007739 2.6e-106 389.4 256 70.7
THA.LOC104801868 Tarenaya hassleriana HOM05D006264 ORTHO05D007739 2.6e-106 389.4 255 71.0
AL1G34960 Arabidopsis lyrata HOM05D006264 ORTHO05D007739 7.7e-106 387.9 254 70.9
Mapoly0151s0012 Marchantia polymorpha HOM05D006264 ORTHO05D007739 7.7e-106 387.9 317 58.4
unitig_748.g7689 Utricularia gibba HOM05D006264 ORTHO05D007739 1.3e-105 387.1 317 58.7
AagrBONN_evm.TU.Sc2ySwM_117.473 Anthoceros agrestis HOM05D006264 ORTHO05D007739 6.1e-103 378.3 309 57.9
DCAR_028205 Daucus carota HOM05D006264 ORTHO05D007739 1.1e-96 357.5 254 66.1
Atru.chr13.1491 Acer truncatum HOM05D006264 ORTHO05D007739 1.4e-86 323.9 220 70.9
CBR_g39544 Chara braunii HOM05D006264 ORTHO05D007739 2.9e-81 306.2 312 48.4
Sopen11g007570 Solanum pennellii HOM05D006264 ORTHO05D007739 2.5e-80 303.1 198 72.2
Psat5g086280 Pisum sativum HOM05D006264 ORTHO05D007739 2.2e-76 290.0 166 76.5
MCO07G330 Micromonas commoda HOM05D006264 ORTHO05D007739 8.4e-52 208.4 307 39.4
Os04g0431200 Oryza sativa ssp. japonica HOM05D006264 ORTHO05D007739 1.8e-46 190.7 142 56.3
PRCOL_00004228 Prasinoderma coloniale HOM05D006264 ORTHO05D007739 4.0e-46 189.5 287 37.3
Cpa.g.c35582 Carica papaya HOM05D006264 ORTHO05D007739 6.9e-46 188.7 144 66.7
Psat5g086240 Pisum sativum HOM05D006264 ORTHO05D007739 2.0e-45 187.2 132 68.9
Cpa.g.sc418.8 Carica papaya HOM05D006264 ORTHO05D007739 3.4e-45 186.4 115 73.0
Cre06.g254450 Chlamydomonas reinhardtii HOM05D006264 ORTHO05D007739 6.6e-41 172.2 297 34.3
arahy.Tifrunner.gnm1.ann1.XAL0CN Arachis hypogaea HOM05D003584 ORTHO05D004148 4.0e-30 136.3 109 55.0
Medtr4g068980 Medicago truncatula HOM05D006264 ORTHO05D007739 1.3e-28 131.3 82 68.3
SEGI_39749 Sequoiadendron giganteum HOM05D006264 ORTHO05D007739 1.2e-26 124.8 109 58.7
SEGI_38549 Sequoiadendron giganteum HOM05D006264 ORTHO05D007739 1.1e-24 118.2 68 70.6
Atru.chr13.1492 Acer truncatum HOM05D006264 ORTHO05D007739 3.1e-22 110.2 85 63.5
Zm00001eb082740 Zea mays HOM05D006264 ORTHO05D007739 1.2e-18 98.2 133 45.1
Cpa.g.c45459 Carica papaya HOM05D006264 ORTHO05D007739 3.9e-17 93.2 78 64.1
PGSC0003DMG400006698 Solanum tuberosum HOM05D006264 ORTHO05D007739 1.1e-14 85.1 69 56.5
Migut.B01582 Erythranthe guttata HOM05D006264 ORTHO05D007739 1.1e-11 75.1 58 65.5
SEGI_08627 Sequoiadendron giganteum HOM05D006264 ORTHO05D007739 1.1e-06 58.5 40 62.5


User provided reference genes

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