Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.02G164300 Manihot esculenta HOM05D006879 ORTHO05D008452 3.1e-63 245.0 124 100.0
Cfa016025 Carpinus fangiana HOM05D006879 ORTHO05D008452 2.2e-45 185.7 108 82.4
Haze_00431 Corylus avellana HOM05D000586 ORTHO05D008452 6.5e-45 184.1 105 82.9
Thecc.08G126700 Theobroma cacao HOM05D006879 ORTHO05D008452 2.5e-44 182.2 111 77.5
Gohir.D01G180300 Gossypium hirsutum HOM05D006879 ORTHO05D008452 4.2e-44 181.4 108 77.8
Potri.005G178501 Populus trichocarpa HOM05D006879 ORTHO05D008452 4.2e-44 181.4 111 80.2
CiPaw.06G031600 Carya illinoinensis HOM05D006879 ORTHO05D008452 3.6e-43 178.3 114 75.4
QL09p034330 Quercus lobata HOM05D006879 ORTHO05D008452 3.6e-43 178.3 109 74.3
QL09p034374 Quercus lobata HOM05D006879 ORTHO05D008452 3.6e-43 178.3 109 74.3
Gohir.A01G189200 Gossypium hirsutum HOM05D006879 ORTHO05D008452 4.6e-43 177.9 108 75.9
Duzib041G0788 Durio zibethinus HOM05D006879 ORTHO05D008452 1.0e-42 176.8 111 74.8
Ciclev10002899m.g Citrus clementina HOM05D006879 ORTHO05D008452 1.4e-42 176.4 105 76.2
Gorai.002G222300 Gossypium raimondii HOM05D006879 ORTHO05D008452 1.4e-42 176.4 108 75.9
Atru.chr13.1490 Acer truncatum HOM05D006879 ORTHO05D008452 6.7e-42 174.1 101 81.2
COL.COLO4_03398 Corchorus olitorius HOM05D006879 ORTHO05D008452 8.8e-42 173.7 115 70.4
Aa31LG4G7630 Aethionema arabicum HOM05D006879 ORTHO05D008452 1.5e-41 172.9 103 77.7
Nn5g28321 Nelumbo nucifera HOM05D006879 ORTHO05D008452 3.3e-41 171.8 99 76.8
FvH4_2g27080 Fragaria vesca HOM05D006879 ORTHO05D008452 4.3e-41 171.4 111 73.0
FAN20G0093 Fragaria x ananassa HOM05D006879 ORTHO05D008452 4.3e-41 171.4 111 73.0
Prupe.1G494800 Prunus persica HOM05D006879 ORTHO05D008452 5.7e-41 171.0 102 79.4
Aqoxy6G00233 Aquilegia oxysepala HOM05D006879 ORTHO05D008452 1.3e-40 169.9 109 73.4
FAN24G0949 Fragaria x ananassa HOM05D006879 ORTHO05D008452 1.7e-40 169.5 111 72.1
Dinv07211 Davidia involucrata HOM05D006879 ORTHO05D008452 2.8e-40 168.7 100 75.0
CsaV3_4G028290 Cucumis sativus L. HOM05D006879 ORTHO05D008452 4.8e-40 167.9 111 64.9
Solyc08g067800.3 Solanum lycopersicum HOM05D006879 ORTHO05D008452 8.2e-40 167.2 99 73.7
Dinv27305 Davidia involucrata HOM05D006879 ORTHO05D008452 1.4e-39 166.4 108 72.2
Hund17297 Selenicereus undatus HOM05D006879 ORTHO05D008452 1.4e-39 166.4 111 72.1
Sopen08g021740 Solanum pennellii HOM05D006879 ORTHO05D008452 1.4e-39 166.4 99 72.7
MD15G1347100 Malus domestica HOM05D006879 ORTHO05D008452 2.4e-39 165.6 102 77.5
MELO3C010476.2 Cucumis melo HOM05D006879 ORTHO05D008452 3.1e-39 165.2 111 64.0
TAR628G0734 Trochodendron aralioides HOM05D006879 ORTHO05D008452 3.1e-39 165.2 92 79.3
CSS0011792 Camellia sinensis var. sinensis HOM05D006879 ORTHO05D008452 4.1e-39 164.9 108 70.4
HanXRQChr03g0088981 Helianthus annuus HOM05D006879 ORTHO05D008452 4.1e-39 164.9 108 70.4
RcHm_v2.0_Chr6g0295961 Rosa chinensis HOM05D006879 ORTHO05D008452 4.1e-39 164.9 101 73.3
Sc02g0005010 Simmondsia chinensis HOM05D006879 ORTHO05D008452 4.1e-39 164.9 111 68.5
Cc10_g12010 Coffea canephora HOM05D006879 ORTHO05D008452 5.3e-39 164.5 108 70.4
Lj1g0005641 Lotus japonicus HOM05D006879 ORTHO05D008452 5.3e-39 164.5 111 70.3
PGR083G2398 Punica granatum HOM05D006879 ORTHO05D008452 6.9e-39 164.1 111 70.3
AL2G37750 Arabidopsis lyrata HOM05D006879 ORTHO05D008452 9.1e-39 163.7 112 71.4
Eucgr.F03793 Eucalyptus grandis HOM05D006879 ORTHO05D008452 9.1e-39 163.7 110 68.2
Thhalv10019334m.g Eutrema salsugineum HOM05D006879 ORTHO05D008452 1.2e-38 163.3 114 71.9
arahy.Tifrunner.gnm1.ann1.0SZ2NS Arachis hypogaea HOM05D006879 ORTHO05D008452 1.5e-38 162.9 91 80.2
arahy.Tifrunner.gnm1.ann1.61DA9N Arachis hypogaea HOM05D006879 ORTHO05D008452 1.5e-38 162.9 91 80.2
arahy.Tifrunner.gnm1.ann1.GV74HV Arachis hypogaea HOM05D006879 ORTHO05D008452 1.5e-38 162.9 91 80.2
Hma1.2p1_0054F.1_g031040 Hydrangea macrophylla HOM05D006879 ORTHO05D008452 1.5e-38 162.9 100 72.0
TWI32G0821 Tripterygium wilfordii HOM05D006879 ORTHO05D008452 2.0e-38 162.5 99 76.8
C06p31190 Brassica napus HOM05D006879 ORTHO05D008452 3.4e-38 161.8 111 69.4
Sp5g32720 Schrenkiella parvula HOM05D006879 ORTHO05D008452 3.4e-38 161.8 113 69.9
BcaC08g45472 Brassica carinata HOM05D006879 ORTHO05D008452 4.5e-38 161.4 111 68.5
BolC6t38260H Brassica oleracea HOM05D006879 ORTHO05D008452 4.5e-38 161.4 111 68.5
Carub.0002s2444 Capsella rubella HOM05D006879 ORTHO05D008452 4.5e-38 161.4 99 75.8
CAN.G21.5 Capsicum annuum HOM05D006879 ORTHO05D008452 4.5e-38 161.4 104 71.2
Lsat_1_v5_gn_6_93360 Lactuca sativa HOM05D006879 ORTHO05D008452 4.5e-38 161.4 111 68.5
AT1G77540 Arabidopsis thaliana HOM05D006879 ORTHO05D008452 5.9e-38 161.0 110 71.8
BcaB02g07111 Brassica carinata HOM05D006879 ORTHO05D008452 5.9e-38 161.0 111 68.5
CDE07G0981 Ceratophyllum demersum HOM05D006879 ORTHO05D008452 5.9e-38 161.0 103 69.9
Sed0023358 Sechium edule HOM05D006879 ORTHO05D008452 5.9e-38 161.0 111 64.0
Phvul.008G160300 Phaseolus vulgaris HOM05D006879 ORTHO05D008452 1.0e-37 160.2 113 69.9
VMungo0647G0471 Vigna mungo HOM05D006879 ORTHO05D008452 1.3e-37 159.8 111 69.4
ClCG11G015720 Citrullus lanatus HOM05D006879 ORTHO05D008452 2.9e-37 158.7 123 58.5
Glyma.14G151700 Glycine max HOM05D006879 ORTHO05D008452 2.9e-37 158.7 108 70.4
Aa31LG7G5750 Aethionema arabicum HOM05D006879 ORTHO05D008452 5.0e-37 157.9 98 75.5
Medtr3g088570 Medicago truncatula HOM05D006879 ORTHO05D008452 5.0e-37 157.9 98 71.4
Nitab4.5_0005583g0080 Nicotiana tabacum HOM05D006879 ORTHO05D008452 6.5e-37 157.5 111 68.5
BraA07t30441Z Brassica rapa HOM05D006879 ORTHO05D008452 1.1e-36 156.8 111 66.7
PSO528G0112 Papaver somniferum HOM05D006879 ORTHO05D008452 1.1e-36 156.8 109 66.1
THA.LOC104813659 Tarenaya hassleriana HOM05D006879 ORTHO05D008452 1.9e-36 156.0 99 74.7
CANSAT56G2034 Cannabis sativa HOM05D006879 ORTHO05D008452 2.5e-36 155.6 114 66.7
CARHR071070 Cardamine hirsuta HOM05D006879 ORTHO05D008452 2.5e-36 155.6 108 70.4
AUR62014329 Chenopodium quinoa HOM05D006879 ORTHO05D008452 2.5e-36 155.6 115 63.5
Nitab4.5_0004334g0040 Nicotiana tabacum HOM05D006879 ORTHO05D008452 2.5e-36 155.6 111 66.7
Psat5g086200 Pisum sativum HOM05D006879 ORTHO05D008452 2.5e-36 155.6 100 72.0
A07p27940 Brassica napus HOM05D006879 ORTHO05D008452 3.2e-36 155.2 111 65.8
Lalb_Chr11g0066061 Lupinus albus HOM05D006879 ORTHO05D008452 3.2e-36 155.2 97 70.1
Actinidia03466 Actinidia chinensis HOM05D006879 ORTHO05D008452 4.2e-36 154.8 106 68.9
Ca_28182_v3 Cicer arietinum L. HOM05D006879 ORTHO05D008452 9.4e-36 153.7 90 76.7
AUR62019072 Chenopodium quinoa HOM05D006879 ORTHO05D008452 1.6e-35 152.9 115 61.7
Carub.0001s2123 Capsella rubella HOM05D006879 ORTHO05D008452 2.7e-35 152.1 104 70.2
ECA240G3722 Erigeron canadensis HOM05D006879 ORTHO05D008452 2.7e-35 152.1 96 69.8
PSO170G0506 Papaver somniferum HOM05D006879 ORTHO05D008452 2.7e-35 152.1 109 65.1
BcaC05g26099 Brassica carinata HOM05D006879 ORTHO05D008452 4.7e-35 151.4 100 71.0
AL1G34970 Arabidopsis lyrata HOM05D006879 ORTHO05D008452 6.1e-35 151.0 103 67.0
EL10Ac1g01022 Beta vulgaris HOM05D006879 ORTHO05D008452 1.0e-34 150.2 101 66.3
Sp1g19330 Schrenkiella parvula HOM05D006879 ORTHO05D008452 1.4e-34 149.8 97 72.2
FAN15G3590 Fragaria x ananassa HOM05D006879 ORTHO05D008452 1.8e-34 149.4 146 54.1
BolC5t30777H Brassica oleracea HOM05D006879 ORTHO05D008452 2.3e-34 149.1 100 70.0
Thhalv10009164m.g Eutrema salsugineum HOM05D006879 ORTHO05D008452 2.3e-34 149.1 97 72.2
ATR0584G146 Amborella trichopoda HOM05D006879 ORTHO05D008452 3.9e-34 148.3 91 72.5
AT1G21770 Arabidopsis thaliana HOM05D006879 ORTHO05D008452 3.9e-34 148.3 109 63.3
BcaB07g32176 Brassica carinata HOM05D006879 ORTHO05D008452 1.5e-33 146.4 100 69.0
Migut.C01128 Erythranthe guttata HOM05D006879 ORTHO05D008452 3.3e-33 145.2 101 64.4
A06p17880 Brassica napus HOM05D006879 ORTHO05D008452 4.4e-33 144.8 100 69.0
BraA06t24878Z Brassica rapa HOM05D006879 ORTHO05D008452 4.4e-33 144.8 100 69.0
MSTRG.25382 Avicennia marina HOM05D006879 ORTHO05D008452 7.4e-33 144.1 101 66.3
C05p20780 Brassica napus HOM05D006879 ORTHO05D008452 1.7e-32 142.9 100 69.0
SGA_v2.0_scaffold52G18964 Striga asiatica HOM05D006879 ORTHO05D008452 4.1e-31 138.3 105 61.9
Cpa.g.sc418.6 Carica papaya HOM05D006879 ORTHO05D008452 7.0e-31 137.5 83 74.7
vmacro00838 Vaccinium macrocarpon HOM05D006879 ORTHO05D008452 1.2e-27 126.7 78 74.4
RhsimUnG0092300 Rhododendron simsii HOM05D000586 ORTHO05D008452 2.1e-27 125.9 78 74.4
CAN.G21.4 Capsicum annuum HOM05D006879 ORTHO05D008452 3.6e-27 125.2 104 51.9
TPR.G20905 Trifolium pratense HOM05D006879 ORTHO05D008452 3.6e-27 125.2 75 73.3
Oeu059437.1 Olea europaea HOM05D006879 ORTHO05D008452 1.0e-26 123.6 66 80.3
GSVIVG01008857001 Vitis vinifera HOM05D006879 ORTHO05D008452 1.5e-25 119.8 66 78.8
Pp3c12_9490 Physcomitrium patens HOM05D006879 ORTHO05D008452 1.4e-23 113.2 113 50.4
Ah.05g171050 Amaranthus hybridus HOM05D006879 ORTHO05D008452 9.1e-23 110.5 79 63.3
Peaxi162Scf00332g00015 Petunia axillaris HOM05D006879 ORTHO05D008452 2.7e-22 109.0 79 67.1
Zm00001eb082730 Zea mays HOM05D006879 ORTHO05D008452 1.0e-21 107.1 114 50.9
HanXRQChr01g0005251 Helianthus annuus HOM05D006879 ORTHO05D008452 5.0e-21 104.8 73 67.1
HanXRQChr04g0101301 Helianthus annuus HOM05D006879 ORTHO05D008452 1.5e-20 103.2 72 68.1
SMO146G0286 Selaginella moellendorffii HOM05D006879 ORTHO05D008452 2.5e-20 102.4 95 49.5
Mapoly0075s0062 Marchantia polymorpha HOM05D006879 ORTHO05D008452 3.0e-18 95.5 125 39.2
SEGI_19819 Sequoiadendron giganteum HOM05D006879 ORTHO05D008452 6.8e-18 94.4 85 55.3
AagrBONN_evm.TU.Sc2ySwM_117.2168 Anthoceros agrestis HOM05D006879 ORTHO05D008452 6.3e-16 87.8 109 44.0
Os04g0431300 Oryza sativa ssp. japonica HOM05D006879 ORTHO05D008452 2.4e-15 85.9 62 56.5
Eucgr.H03927 Eucalyptus grandis HOM05D006879 ORTHO05D008452 5.9e-14 81.3 104 45.2
CBR_g36233 Chara braunii HOM05D006879 ORTHO05D008452 3.2e-12 75.5 152 30.9
Eucgr.H03925 Eucalyptus grandis HOM05D006879 ORTHO05D008452 2.7e-11 72.4 61 54.1
HanXRQChr09g0244451 Helianthus annuus HOM05D006879 ORTHO05D008452 8.0e-11 70.9 61 50.8


User provided reference genes

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