Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.02G163800 Manihot esculenta HOM05D007582 ORTHO05D009645 2.1e-63 245.4 110 100.0
Manes.18G077606 Manihot esculenta HOM05D007582 ORTHO05D009645 1.4e-54 216.1 110 86.4
Potri.002G083100 Populus trichocarpa HOM05D007582 ORTHO05D009645 2.9e-49 198.4 114 78.9
Nn5g28305 Nelumbo nucifera HOM05D007582 ORTHO05D009645 9.5e-48 193.4 112 75.9
Thecc.08G126100 Theobroma cacao HOM05D007582 ORTHO05D009645 1.4e-46 189.5 112 74.1
MD15G1347500 Malus domestica HOM05D007582 ORTHO05D009645 3.0e-46 188.3 110 74.5
TAR381G0802 Trochodendron aralioides HOM05D007582 ORTHO05D009645 6.8e-46 187.2 110 72.7
Prupe.1G495300 Prunus persica HOM05D007582 ORTHO05D009645 2.0e-45 185.7 112 72.3
QL09p034466 Quercus lobata HOM05D007582 ORTHO05D009645 2.6e-45 185.3 110 74.5
Lalb_Chr17g0343701 Lupinus albus HOM05D007582 ORTHO05D009645 5.8e-45 184.1 110 70.0
Sc22g0004000 Simmondsia chinensis HOM05D007582 ORTHO05D009645 1.3e-44 183.0 110 70.9
Nn1g00264 Nelumbo nucifera HOM05D007582 ORTHO05D009645 8.3e-44 180.3 111 71.2
TWI34G1919 Tripterygium wilfordii HOM05D007582 ORTHO05D009645 1.8e-43 179.1 113 69.9
Haze_00435 Corylus avellana HOM05D007582 ORTHO05D009645 3.2e-43 178.3 111 73.0
RcHm_v2.0_Chr6g0295891 Rosa chinensis HOM05D007582 ORTHO05D009645 4.1e-43 177.9 110 70.9
CiPaw.05G221000 Carya illinoinensis HOM05D007582 ORTHO05D009645 1.2e-42 176.4 110 72.7
FAN15G1067 Fragaria x ananassa HOM05D007582 ORTHO05D009645 1.6e-42 176.0 110 70.0
Duzib116G0545 Durio zibethinus HOM05D007582 ORTHO05D009645 2.0e-42 175.6 110 69.1
Nitab4.5_0003719g0010 Nicotiana tabacum HOM05D007582 ORTHO05D009645 2.7e-42 175.3 113 71.7
ClCG08G005690 Citrullus lanatus HOM05D007582 ORTHO05D009645 4.6e-42 174.5 113 68.1
Oeu028565.1 Olea europaea HOM05D007582 ORTHO05D009645 6.0e-42 174.1 113 68.1
Solyc06g060300.1 Solanum lycopersicum HOM05D007582 ORTHO05D009645 6.0e-42 174.1 110 69.1
ATR0584G060 Amborella trichopoda HOM05D007582 ORTHO05D009645 7.8e-42 173.7 115 68.7
CANSAT11G2348 Cannabis sativa HOM05D007582 ORTHO05D009645 7.8e-42 173.7 110 69.1
SHI08583 Sapria himalayana HOM05D007582 ORTHO05D009645 7.8e-42 173.7 110 69.1
Ciclev10002916m.g Citrus clementina HOM05D007582 ORTHO05D009645 1.0e-41 173.3 110 69.1
Sopen06g020420 Solanum pennellii HOM05D007582 ORTHO05D009645 1.0e-41 173.3 110 69.1
MELO3C010615.2 Cucumis melo HOM05D007582 ORTHO05D009645 1.3e-41 172.9 114 68.4
Atru.chr13.1488 Acer truncatum HOM05D007582 ORTHO05D009645 1.7e-41 172.6 110 70.0
CAN.G1040.1 Capsicum annuum HOM05D007582 ORTHO05D009645 2.3e-41 172.2 110 68.2
RhsimUnG0092400 Rhododendron simsii HOM05D007582 ORTHO05D009645 2.3e-41 172.2 119 65.5
Gohir.D06G045500 Gossypium hirsutum HOM05D007582 ORTHO05D009645 3.0e-41 171.8 102 74.5
PGSC0003DMG400041136 Solanum tuberosum HOM05D007582 ORTHO05D009645 3.0e-41 171.8 110 69.1
Aqoxy6G00171 Aquilegia oxysepala HOM05D007582 ORTHO05D009645 5.0e-41 171.0 110 66.4
MSTRG.22408 Avicennia marina HOM05D007582 ORTHO05D009645 6.6e-41 170.6 110 69.1
Gorai.010G050500 Gossypium raimondii HOM05D007582 ORTHO05D009645 6.6e-41 170.6 102 74.5
Lj1g0018777 Lotus japonicus HOM05D007582 ORTHO05D009645 8.6e-41 170.2 111 65.8
CAN.G1040.3 Capsicum annuum HOM05D007582 ORTHO05D009645 1.9e-40 169.1 110 67.3
PGR042G2864 Punica granatum HOM05D007582 ORTHO05D009645 2.5e-40 168.7 109 68.8
Dinv07214 Davidia involucrata HOM05D007582 ORTHO05D009645 3.3e-40 168.3 117 65.8
vmacro00836 Vaccinium macrocarpon HOM05D007582 ORTHO05D009645 4.3e-40 167.9 125 62.4
THA.LOC104817375 Tarenaya hassleriana HOM05D007582 ORTHO05D009645 5.6e-40 167.5 110 67.3
Migut.N03282 Erythranthe guttata HOM05D007582 ORTHO05D009645 7.3e-40 167.2 110 69.1
TPR.G25776 Trifolium pratense HOM05D007582 ORTHO05D009645 9.5e-40 166.8 112 63.4
CDE06G0523 Ceratophyllum demersum HOM05D007582 ORTHO05D009645 2.1e-39 165.6 112 64.3
CSS0038396 Camellia sinensis var. sinensis HOM05D007582 ORTHO05D009645 3.6e-39 164.9 119 64.7
Cpa.g.sc64.90 Carica papaya HOM05D007582 ORTHO05D009645 3.6e-39 164.9 114 67.5
Medtr1g029990 Medicago truncatula HOM05D007582 ORTHO05D009645 3.6e-39 164.9 111 63.1
AT1G44414 Arabidopsis thaliana HOM05D007582 ORTHO05D009645 4.7e-39 164.5 110 66.4
AL1G52300 Arabidopsis lyrata HOM05D007582 ORTHO05D009645 6.2e-39 164.1 110 66.4
PSO528G0093 Papaver somniferum HOM05D007582 ORTHO05D009645 6.2e-39 164.1 110 67.3
Aa31LG6G9350 Aethionema arabicum HOM05D007582 ORTHO05D009645 8.0e-39 163.7 110 65.5
Carub.0001s3518 Capsella rubella HOM05D007582 ORTHO05D009645 1.1e-38 163.3 110 65.5
SalBow6G5334 Salvia bowleyana HOM05D007582 ORTHO05D009645 1.1e-38 163.3 110 67.3
PSO170G1805 Papaver somniferum HOM05D007582 ORTHO05D009645 1.8e-38 162.5 110 67.3
Cc10_g11990 Coffea canephora HOM05D007582 ORTHO05D009645 3.1e-38 161.8 117 63.2
Peaxi162Scf00051g00105 Petunia axillaris HOM05D007582 ORTHO05D009645 3.1e-38 161.8 106 68.9
VMungo0647G1492 Vigna mungo HOM05D007582 ORTHO05D009645 4.0e-38 161.4 110 60.9
CARHR035920 Cardamine hirsuta HOM05D007582 ORTHO05D009645 5.2e-38 161.0 110 65.5
Lj4P628T29 Lonicera japonica HOM05D007582 ORTHO05D009645 5.2e-38 161.0 110 66.4
BcaB07g33949 Brassica carinata HOM05D007582 ORTHO05D009645 8.9e-38 160.2 110 63.6
Sp1g33530 Schrenkiella parvula HOM05D007582 ORTHO05D009645 1.5e-37 159.5 110 64.5
SGA_v2.0_scaffold28G11996 Striga asiatica HOM05D007582 ORTHO05D009645 1.5e-37 159.5 112 64.3
Thhalv10012348m.g Eutrema salsugineum HOM05D007582 ORTHO05D009645 2.0e-37 159.1 110 64.5
Aqoxy6G00227 Aquilegia oxysepala HOM05D007582 ORTHO05D009645 3.4e-37 158.3 103 65.0
Hma1.2p1_0054F.1_g031010 Hydrangea macrophylla HOM05D007582 ORTHO05D009645 1.3e-36 156.4 110 65.5
Glyma.14G150500 Glycine max HOM05D007582 ORTHO05D009645 2.2e-36 155.6 115 58.3
DCAR_016167 Daucus carota HOM05D007582 ORTHO05D009645 2.9e-36 155.2 110 62.7
BolC6t35199H Brassica oleracea HOM05D007582 ORTHO05D009645 3.7e-36 154.8 110 64.5
A06p11790 Brassica napus HOM05D007582 ORTHO05D009645 4.9e-36 154.5 110 62.7
CsaV3_6G034440 Cucumis sativus L. HOM05D007582 ORTHO05D009645 8.3e-36 153.7 105 64.8
Phvul.008G160900 Phaseolus vulgaris HOM05D007582 ORTHO05D009645 1.4e-35 152.9 110 58.2
Phvul.008G167875 Phaseolus vulgaris HOM05D007582 ORTHO05D009645 1.4e-35 152.9 110 58.2
HPP92_006841 Vanilla planifolia HOM05D007582 ORTHO05D009645 2.4e-35 152.1 119 58.0
BcaC08g42847 Brassica carinata HOM05D007582 ORTHO05D009645 3.2e-35 151.8 110 63.6
C06p00630 Brassica napus HOM05D007582 ORTHO05D009645 3.2e-35 151.8 110 63.6
Zm00001eb348620 Zea mays HOM05D007582 ORTHO05D009645 1.6e-34 149.4 110 60.0
Sed0002225 Sechium edule HOM05D007582 ORTHO05D009645 3.5e-34 148.3 114 57.9
HanXRQChr15g0465231 Helianthus annuus HOM05D007582 ORTHO05D009645 1.0e-33 146.7 110 61.8
arahy.Tifrunner.gnm1.ann1.WSBZ3R Arachis hypogaea HOM05D007582 ORTHO05D009645 2.3e-33 145.6 100 67.0
Gohir.A06G045000 Gossypium hirsutum HOM05D007582 ORTHO05D009645 6.6e-33 144.1 80 77.5
Psat6g041680 Pisum sativum HOM05D007582 ORTHO05D009139 3.3e-32 141.7 96 58.3
Nn3g18690 Nelumbo nucifera HOM05D007582 ORTHO05D009645 1.2e-31 139.8 109 59.6
Os05g0435400 Oryza sativa ssp. japonica HOM05D007582 ORTHO05D009645 5.2e-30 134.4 113 57.5
ECA233G1368 Erigeron canadensis HOM05D007582 ORTHO05D009645 6.8e-30 134.0 104 58.7
SMO143G0209 Selaginella moellendorffii HOM05D007582 ORTHO05D009645 2.4e-27 125.6 112 48.2
Nn4g24512 Nelumbo nucifera HOM05D007582 ORTHO05D009645 2.0e-21 105.9 71 63.4
Mapoly0085s0071 Marchantia polymorpha HOM05D007582 ORTHO05D009645 4.9e-20 101.3 129 36.4
Pp3c19_19360 Physcomitrium patens HOM05D007582 ORTHO05D009645 3.2e-19 98.6 122 40.2
Nitab4.5_0011334g0030 Nicotiana tabacum HOM05D007582 ORTHO05D009645 1.0e-17 93.6 80 53.8
AagrBONN_evm.TU.Sc2ySwM_362.1959 Anthoceros agrestis HOM05D007582 ORTHO05D009645 4.4e-13 78.2 67 53.7
Aa31LG6G9370 Aethionema arabicum HOM05D007582 ORTHO05D009645 1.3e-12 76.6 110 41.8
Nn1g08790 Nelumbo nucifera HOM05D007582 ORTHO05D009645 1.1e-11 73.6 35 82.9
AagrBONN_evm.TU.Sc2ySwM_362.2461 Anthoceros agrestis HOM05D007582 ORTHO05D009645 3.2e-11 72.0 66 43.9
Phvul.L001669 Phaseolus vulgaris HOM05D007582 ORTHO05D009645 8.7e-09 63.9 42 66.7


User provided reference genes

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