Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.02G161000 Manihot esculenta HOM05D003443 ORTHO05D009887 1.1e-250 869.4 424 100.0
Sabra05G0132100 Salix brachista HOM05D003443 ORTHO05D009887 1.4e-160 570.1 440 64.5
TWI56G0082 Tripterygium wilfordii HOM05D003443 ORTHO05D009887 6.7e-158 561.2 424 64.6
Atru.chr13.1406 Acer truncatum HOM05D003443 ORTHO05D009887 3.0e-150 535.8 429 62.7
GSVIVG01008903001 Vitis vinifera HOM05D003443 ORTHO05D009887 5.0e-145 518.5 425 60.5
Thecc.08G121100 Theobroma cacao HOM05D003443 ORTHO05D009887 7.2e-144 514.6 424 59.4
QL09p035320 Quercus lobata HOM05D003443 ORTHO05D009887 1.0e-142 510.8 438 61.4
TAR628G0851 Trochodendron aralioides HOM05D003443 ORTHO05D009887 1.8e-139 500.0 426 57.3
Cfa015987 Carpinus fangiana HOM05D003443 ORTHO05D009887 6.9e-139 498.0 413 62.7
Prupe.1G501800 Prunus persica HOM05D003443 ORTHO05D009887 6.9e-139 498.0 435 57.9
Gohir.A05G233300 Gossypium hirsutum HOM05D003443 ORTHO05D009887 3.4e-138 495.7 433 57.5
Gorai.009G244000 Gossypium raimondii HOM05D003443 ORTHO05D009887 6.5e-137 491.5 433 57.3
Sed0010337 Sechium edule HOM05D003443 ORTHO05D009887 6.3e-132 474.9 422 55.5
Eucgr.F03767 Eucalyptus grandis HOM05D003443 ORTHO05D009887 1.1e-131 474.2 431 56.1
ClCG11G015590 Citrullus lanatus HOM05D003443 ORTHO05D009887 4.5e-130 468.8 418 56.5
RhsimUnG0094800 Rhododendron simsii HOM05D003443 ORTHO05D009887 1.3e-129 467.2 460 52.4
RcHm_v2.0_Chr6g0295331 Rosa chinensis HOM05D003443 ORTHO05D009887 2.2e-129 466.5 435 56.1
MELO3C010459.2 Cucumis melo HOM05D003443 ORTHO05D009887 3.2e-128 462.6 425 55.5
MD08G1168100 Malus domestica HOM05D003443 ORTHO05D009887 1.6e-127 460.3 438 54.6
Nn5g28161 Nelumbo nucifera HOM05D003443 ORTHO05D009887 2.7e-127 459.5 427 54.6
Hund16841 Selenicereus undatus HOM05D003443 ORTHO05D009887 3.6e-127 459.1 419 57.3
FAN15G1193 Fragaria x ananassa HOM05D002169 ORTHO05D006927 8.0e-127 458.0 429 54.5
CsaV3_4G028430 Cucumis sativus L. HOM05D003443 ORTHO05D009887 1.8e-126 456.8 418 55.5
QL09p036517 Quercus lobata HOM05D003443 ORTHO05D009887 1.8e-126 456.8 407 60.0
Lalb_Chr10g0101921 Lupinus albus HOM05D003443 ORTHO05D009887 5.2e-126 455.3 434 53.7
FvH4_2g26511 Fragaria vesca HOM05D003443 ORTHO05D009887 6.7e-126 454.9 435 53.8
CANSAT25G3703 Cannabis sativa HOM05D003443 ORTHO05D009887 2.2e-124 449.9 422 53.8
Lj1g0008620 Lotus japonicus HOM05D003443 ORTHO05D009887 7.7e-122 441.4 431 52.2
VMungo0647G1328 Vigna mungo HOM05D003443 ORTHO05D009887 7.7e-122 441.4 428 52.6
Psat2g078480 Pisum sativum HOM05D003443 ORTHO05D009887 2.9e-121 439.5 434 52.1
Ca_03725_v3 Cicer arietinum L. HOM05D003443 ORTHO05D009887 9.4e-120 434.5 430 52.8
Medtr5g059070 Medicago truncatula HOM05D003443 ORTHO05D009887 2.7e-119 433.0 434 51.4
arahy.Tifrunner.gnm1.ann1.5F0RSX Arachis hypogaea HOM05D003443 ORTHO05D009887 6.1e-119 431.8 432 51.2
Phvul.008G165600 Phaseolus vulgaris HOM05D003443 ORTHO05D009887 6.7e-118 428.3 435 51.3
arahy.Tifrunner.gnm1.ann1.JR3K98 Arachis hypogaea HOM05D003443 ORTHO05D009887 8.8e-118 427.9 432 50.7
DCAR_003542 Daucus carota HOM05D003443 ORTHO05D009887 3.7e-116 422.5 420 49.0
Migut.C01151 Erythranthe guttata HOM05D003443 ORTHO05D009887 4.2e-112 409.1 424 48.6
Lsat_1_v5_gn_1_8320 Lactuca sativa HOM05D003443 ORTHO05D009887 7.2e-112 408.3 416 50.5
MSTRG.1462 Avicennia marina HOM05D003443 ORTHO05D009887 2.1e-111 406.8 427 49.2
HanXRQChr04g0111631 Helianthus annuus HOM05D003443 ORTHO05D009887 2.1e-111 406.8 417 51.6
CAN.G48.26 Capsicum annuum HOM05D003443 ORTHO05D009887 1.0e-110 404.4 423 49.6
Lj7C333G3 Lonicera japonica HOM05D003443 ORTHO05D009887 1.2e-109 401.0 369 55.0
Duzib093G0763 Durio zibethinus HOM05D003443 ORTHO05D009887 1.3e-108 397.5 354 55.6
PGSC0003DMG400014817 Solanum tuberosum HOM05D003443 ORTHO05D009887 1.3e-108 397.5 427 47.5
Nitab4.5_0002816g0090 Nicotiana tabacum HOM05D003443 ORTHO05D009887 2.2e-108 396.7 423 48.0
FAN27G2831 Fragaria x ananassa HOM05D003443 ORTHO05D009887 8.3e-108 394.8 395 51.4
Haze_00482 Corylus avellana HOM05D003443 ORTHO05D009887 1.2e-106 391.0 424 51.2
Solyc03g093210.3 Solanum lycopersicum HOM05D003443 ORTHO05D009887 1.7e-105 387.1 444 45.7
SalBow7G0745 Salvia bowleyana HOM05D003443 ORTHO05D009887 3.8e-105 386.0 424 46.9
SalBow7G1610 Salvia bowleyana HOM05D003443 ORTHO05D009887 3.6e-103 379.4 421 46.3
Glyma.14G162900 Glycine max HOM05D003443 ORTHO05D009887 8.0e-103 378.3 375 50.9
Potri.005G174900 Populus trichocarpa HOM05D003443 ORTHO05D009887 3.4e-101 372.9 423 47.8
Nitab4.5_0010023g0010 Nicotiana tabacum HOM05D003443 ORTHO05D009887 7.5e-101 371.7 496 41.1
TPR.G8502 Trifolium pratense HOM05D003443 ORTHO05D009887 5.9e-98 362.1 403 48.1
ECA247G0446 Erigeron canadensis HOM05D003443 ORTHO05D009887 4.3e-96 355.9 331 52.6
SGA_v2.0_scaffold52G18985 Striga asiatica HOM05D003443 ORTHO05D009887 9.5e-96 354.8 425 43.5
AUR62004719 Chenopodium quinoa HOM05D003443 ORTHO05D009887 8.9e-94 348.2 379 48.0
EL10Ac1g00011 Beta vulgaris HOM05D003443 ORTHO05D009887 1.3e-92 344.4 426 46.5
Sc01g0001370 Simmondsia chinensis HOM05D003443 ORTHO05D009887 2.2e-92 343.6 375 48.5
Actinidia25684 Actinidia chinensis HOM05D003443 ORTHO05D009887 5.6e-88 328.9 309 53.7
AUR62023638 Chenopodium quinoa HOM05D003443 ORTHO05D009887 2.6e-85 320.1 373 46.1
vmacro00815 Vaccinium macrocarpon HOM05D003443 ORTHO05D009887 5.8e-85 318.9 453 41.9
Oeu050896.1 Olea europaea HOM05D003443 ORTHO05D009887 3.7e-84 316.2 458 41.0
Medtr5g459020 Medicago truncatula HOM05D003443 ORTHO05D009887 2.4e-83 313.5 346 47.4
MBI06_g02575_MAGBIO Magnolia biondii HOM05D003443 ORTHO05D009887 5.6e-80 302.4 424 42.2
Peaxi162Scf00241g00037 Petunia axillaris HOM05D003443 ORTHO05D009887 1.6e-79 300.8 441 38.3
Aqoxy5G02443 Aquilegia oxysepala HOM05D003443 ORTHO05D009887 2.5e-72 276.9 256 52.3
Cc10_g11010 Coffea canephora HOM05D003443 ORTHO05D009887 2.2e-60 237.3 264 45.1
Sopen03g024010 Solanum pennellii HOM05D003443 ORTHO05D009887 3.2e-59 233.4 326 39.6
Gohir.D05G235701 Gossypium hirsutum HOM05D003443 ORTHO05D009887 1.6e-58 231.1 209 55.5
Actinidia29454 Actinidia chinensis HOM05D003443 ORTHO05D009887 7.8e-58 228.8 213 54.9
MBI06_g35594_MAGBIO Magnolia biondii HOM05D003443 ORTHO05D009887 4.9e-52 209.5 205 50.7
ATR0684G011 Amborella trichopoda HOM05D003443 ORTHO05D009887 1.3e-47 194.9 258 38.0
Cc10_g11020 Coffea canephora HOM05D003443 ORTHO05D009887 2.0e-45 187.6 163 54.0
MBI06_g44274_MAGBIO Magnolia biondii HOM05D003443 ORTHO05D009887 9.9e-45 185.3 314 35.7
Os04g0450500 Oryza sativa ssp. japonica HOM05D003443 ORTHO05D009887 7.1e-35 152.5 257 35.8
Lj7E334T0 Lonicera japonica HOM05D003443 ORTHO05D009887 1.1e-30 138.7 85 72.9
COL.COLO4_12190 Corchorus olitorius HOM05D003443 ORTHO05D009887 3.9e-25 120.2 76 68.4
PGSC0003DMG400021471 Solanum tuberosum HOM05D003443 ORTHO05D009887 2.8e-23 114.0 80 67.5
Aqoxy5G02442 Aquilegia oxysepala HOM05D003443 ORTHO05D009887 4.8e-23 113.2 145 44.1
MBI06_g35595_MAGBIO Magnolia biondii HOM05D003443 ORTHO05D009887 1.1e-22 112.1 131 45.0
SEGI_24688 Sequoiadendron giganteum HOM05D003443 ORTHO05D009887 7.7e-13 79.3 181 28.7
Migut.K01194 Erythranthe guttata HOM05D003443 ORTHO05D009887 2.7e-10 70.9 214 25.2
Hma1.2p1_0248F.1_g102080 Hydrangea macrophylla HOM05D003443 ORTHO05D009887 1.0e-09 68.9 36 80.6
Lsat_1_v5_gn_1_21640 Lactuca sativa HOM05D001068 ORTHO05D002190 3.7e-07 60.5 49 55.1


User provided reference genes

Program Settings