Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.02G160800 Manihot esculenta HOM05D006768 ORTHO05D008436 7.6e-52 206.8 101 100.0
Manes.18G074850 Manihot esculenta HOM05D006768 ORTHO05D008436 1.9e-50 202.2 101 96.0
Potri.005G174700 Populus trichocarpa HOM05D006768 ORTHO05D008436 6.2e-46 187.2 101 89.1
Duzib116G0009 Durio zibethinus HOM05D006768 ORTHO05D008436 2.4e-45 185.3 101 91.1
Potri.002G086600 Populus trichocarpa HOM05D006768 ORTHO05D008436 2.4e-45 185.3 101 88.1
MELO3C011580.2 Cucumis melo HOM05D006768 ORTHO05D008436 4.0e-45 184.5 102 90.2
ClCG08G005390 Citrullus lanatus HOM05D006768 ORTHO05D008436 5.3e-45 184.1 102 90.2
Gohir.D02G081200 Gossypium hirsutum HOM05D006768 ORTHO05D008436 1.5e-44 182.6 102 89.2
COL.COLO4_38328 Corchorus olitorius HOM05D006768 ORTHO05D008436 2.6e-44 181.8 103 88.3
Thecc.08G120600 Theobroma cacao HOM05D006768 ORTHO05D008436 3.4e-44 181.4 102 88.2
Cpa.g.sc36.24 Carica papaya HOM05D006768 ORTHO05D008436 5.8e-44 180.6 103 85.4
Gohir.D05G235400 Gossypium hirsutum HOM05D006768 ORTHO05D008436 5.8e-44 180.6 102 87.3
Nitab4.5_0010364g0020 Nicotiana tabacum HOM05D006768 ORTHO05D008436 5.8e-44 180.6 102 89.2
Solyc11g013100.2 Solanum lycopersicum HOM05D006768 ORTHO05D008436 7.6e-44 180.3 102 87.3
Sopen11g008160 Solanum pennellii HOM05D006768 ORTHO05D008436 7.6e-44 180.3 102 87.3
Gohir.A05G233000 Gossypium hirsutum HOM05D006768 ORTHO05D008436 1.7e-43 179.1 102 87.3
CAN.G342.8 Capsicum annuum HOM05D006768 ORTHO05D008436 4.9e-43 177.6 101 88.1
CAN.G2.37 Capsicum annuum HOM05D006768 ORTHO05D008436 6.5e-43 177.2 101 88.1
Sed0001868 Sechium edule HOM05D006768 ORTHO05D008436 8.4e-43 176.8 102 86.3
Hma1.2p1_0009F.1_g006320 Hydrangea macrophylla HOM05D006768 ORTHO05D008436 1.1e-42 176.4 104 85.6
Duzib041G0323 Durio zibethinus HOM05D006768 ORTHO05D008436 3.2e-42 174.9 102 84.3
CsaV3_6G003570 Cucumis sativus L. HOM05D006768 ORTHO05D008436 2.7e-41 171.8 96 88.5
Gorai.005G090800 Gossypium raimondii HOM05D006768 ORTHO05D008436 6.0e-41 170.6 102 85.3
Sabra02G0068000 Salix brachista HOM05D006768 ORTHO05D008436 1.8e-40 169.1 95 86.3
PGSC0003DMG400014092 Solanum tuberosum HOM05D006768 ORTHO05D008436 3.0e-40 168.3 101 82.2
Aqoxy6G00156 Aquilegia oxysepala HOM05D006768 ORTHO05D008436 3.9e-40 167.9 101 83.2
Gohir.A02G074000 Gossypium hirsutum HOM05D006768 ORTHO05D008436 3.9e-40 167.9 102 84.3
Nitab4.5_0005357g0030 Nicotiana tabacum HOM05D006768 ORTHO05D008436 6.7e-40 167.2 96 87.5
CiPaw.06G026900 Carya illinoinensis HOM05D006768 ORTHO05D008436 2.5e-39 165.2 107 79.4
Gorai.009G243700 Gossypium raimondii HOM05D006768 ORTHO05D008436 4.3e-39 164.5 97 83.5
PGR044G1209 Punica granatum HOM05D006768 ORTHO05D008436 4.3e-39 164.5 102 82.4
vmacro00812 Vaccinium macrocarpon HOM05D006768 ORTHO05D008436 4.3e-39 164.5 103 83.5
MSTRG.25394 Avicennia marina HOM05D006768 ORTHO05D008436 9.6e-39 163.3 102 82.4
CSS0001196 Camellia sinensis var. sinensis HOM05D006768 ORTHO05D008436 1.3e-38 162.9 103 82.5
SalBow7G0914 Salvia bowleyana HOM05D006768 ORTHO05D008436 1.6e-38 162.5 95 84.2
SalBow7G4665 Salvia bowleyana HOM05D006768 ORTHO05D008436 1.6e-38 162.5 95 84.2
TWI56G0584 Tripterygium wilfordii HOM05D006768 ORTHO05D008436 6.3e-38 160.6 104 78.8
CSS0006116 Camellia sinensis var. sinensis HOM05D006768 ORTHO05D008436 8.2e-38 160.2 102 78.4
TAR625G0411 Trochodendron aralioides HOM05D006768 ORTHO05D008436 1.1e-37 159.8 101 80.2
Ciclev10002911m.g Citrus clementina HOM05D006768 ORTHO05D008436 1.4e-37 159.5 107 78.5
EL10Ac1g00013 Beta vulgaris HOM05D006768 ORTHO05D008436 5.3e-37 157.5 106 74.5
Migut.C01157 Erythranthe guttata HOM05D006768 ORTHO05D008436 6.9e-37 157.1 103 81.6
Cc10_g11060 Coffea canephora HOM05D006768 ORTHO05D008436 1.5e-36 156.0 96 81.2
HanXRQChr08g0223691 Helianthus annuus HOM05D006768 ORTHO05D008436 1.5e-36 156.0 101 80.2
Lsat_1_v5_gn_4_25061 Lactuca sativa HOM05D006768 ORTHO05D008436 1.3e-35 152.9 100 77.0
Sabra05G0131800 Salix brachista HOM05D006768 ORTHO05D008436 1.3e-35 152.9 84 86.9
GSVIVG01008909001 Vitis vinifera HOM05D006768 ORTHO05D008436 2.2e-35 152.1 110 73.6
Dinv27347 Davidia involucrata HOM05D006768 ORTHO05D008436 2.9e-35 151.8 94 80.9
TAR376G1039 Trochodendron aralioides HOM05D000018 ORTHO05D001920 3.8e-35 151.4 91 83.5
arahy.Tifrunner.gnm1.ann1.BFT67J Arachis hypogaea HOM05D006768 ORTHO05D008436 5.0e-35 151.0 112 72.3
arahy.Tifrunner.gnm1.ann1.V4QE5E Arachis hypogaea HOM05D006768 ORTHO05D008436 5.0e-35 151.0 112 72.3
FvH4_2g26460 Fragaria vesca HOM05D006768 ORTHO05D008436 5.0e-35 151.0 102 78.4
RcHm_v2.0_Chr6g0295131 Rosa chinensis HOM05D006768 ORTHO05D008436 5.0e-35 151.0 102 78.4
FAN24G3387 Fragaria x ananassa HOM05D006768 ORTHO05D008436 2.5e-34 148.7 102 77.5
Hma1.2p1_0073F.1_g038410 Hydrangea macrophylla HOM05D006768 ORTHO05D008436 3.2e-34 148.3 101 75.2
MD08G1168400 Malus domestica HOM05D006768 ORTHO05D008436 5.5e-34 147.5 99 77.8
Prupe.1G502600 Prunus persica HOM05D006768 ORTHO05D008436 5.5e-34 147.5 102 77.5
RhsimUnG0095400 Rhododendron simsii HOM05D006768 ORTHO05D008436 1.2e-33 146.4 95 80.0
Haze_00489 Corylus avellana HOM05D006768 ORTHO05D008436 1.6e-33 146.0 84 89.3
Atru.chr13.1393 Acer truncatum HOM05D006768 ORTHO05D008436 4.6e-33 144.4 105 75.2
unitig_21.g20584 Utricularia gibba HOM05D006768 ORTHO05D008436 6.1e-33 144.1 101 70.3
AUR62004718 Chenopodium quinoa HOM05D006768 ORTHO05D008436 7.9e-33 143.7 107 72.0
ECA234G1078 Erigeron canadensis HOM05D006768 ORTHO05D008436 7.9e-33 143.7 105 72.4
ECA233G5727 Erigeron canadensis HOM05D006768 ORTHO05D008436 3.9e-32 141.4 100 71.0
Psat2g079320 Pisum sativum HOM05D006768 ORTHO05D008436 3.9e-32 141.4 107 73.8
FAN15G1404 Fragaria x ananassa HOM05D006768 ORTHO05D008436 5.1e-32 141.0 97 77.3
TWI12G0503 Tripterygium wilfordii HOM05D006768 ORTHO05D008436 6.7e-32 140.6 105 71.4
Eucgr.F04346 Eucalyptus grandis HOM05D006768 ORTHO05D008436 1.1e-31 139.8 86 82.6
Lalb_Chr04g0253331 Lupinus albus HOM05D006768 ORTHO05D008436 2.5e-31 138.7 113 68.1
QL09p036660 Quercus lobata HOM05D006768 ORTHO05D008436 5.7e-31 137.5 106 68.9
HanXRQChr16g0527071 Helianthus annuus HOM05D006768 ORTHO05D008436 7.4e-31 137.1 100 71.0
CANSAT25G0473 Cannabis sativa HOM05D006768 ORTHO05D008436 1.3e-30 136.3 114 66.7
MBI06_g02573_MAGBIO Magnolia biondii HOM05D006768 ORTHO05D008436 1.6e-30 136.0 94 74.5
SGA_v2.0_scaffold24G10479 Striga asiatica HOM05D006768 ORTHO05D008436 4.8e-30 134.4 100 65.0
Hund27041 Selenicereus undatus HOM05D006768 ORTHO05D008436 8.2e-30 133.7 109 67.9
TPR.G8510 Trifolium pratense HOM05D006768 ORTHO05D008436 8.2e-30 133.7 109 67.0
Glyma.14G163200 Glycine max HOM05D006768 ORTHO05D008436 2.4e-29 132.1 111 68.5
Lj1g0025240 Lotus japonicus HOM05D006768 ORTHO05D008436 3.1e-29 131.7 116 64.7
Glyma.13G082200 Glycine max HOM05D006768 ORTHO05D008436 4.1e-29 131.3 111 66.7
Phvul.008G165800 Phaseolus vulgaris HOM05D006768 ORTHO05D008436 4.1e-29 131.3 114 66.7
Medtr5g059100 Medicago truncatula HOM05D006768 ORTHO05D008436 5.3e-29 131.0 108 71.3
BcaB01g02871 Brassica carinata HOM05D006768 ORTHO05D008436 9.0e-29 130.2 105 68.6
PSO170G4432 Papaver somniferum HOM05D006768 ORTHO05D008436 9.0e-29 130.2 103 70.9
PSO528G0064 Papaver somniferum HOM05D006768 ORTHO05D008436 9.0e-29 130.2 103 70.9
Thhalv10029535m.g Eutrema salsugineum HOM05D006768 ORTHO05D008436 2.6e-28 128.6 107 66.4
Sc23g0000800 Simmondsia chinensis HOM05D006768 ORTHO05D008436 1.7e-27 125.9 89 75.3
THA.LOC104817125 Tarenaya hassleriana HOM05D006768 ORTHO05D008436 1.7e-27 125.9 109 67.9
CDE04G1345 Ceratophyllum demersum HOM05D006768 ORTHO05D008436 1.4e-26 122.9 101 60.4
Sp6g09840 Schrenkiella parvula HOM05D006768 ORTHO05D008436 1.9e-26 122.5 115 63.5
BcaC01g04777 Brassica carinata HOM05D006768 ORTHO05D008436 2.5e-26 122.1 113 63.7
BolC3t15699H Brassica oleracea HOM05D006768 ORTHO05D008436 2.5e-26 122.1 113 63.7
CARHR259330 Cardamine hirsuta HOM05D006768 ORTHO05D008436 2.5e-26 122.1 111 61.3
BraA03t12013Z Brassica rapa HOM05D006768 ORTHO05D008436 3.2e-26 121.7 114 63.2
Os03g0263700 Oryza sativa ssp. japonica HOM05D006768 ORTHO05D008436 1.2e-25 119.8 109 61.5
HPP92_011177 Vanilla planifolia HOM05D006768 ORTHO05D008436 2.7e-25 118.6 102 64.7
Zm00001eb398080 Zea mays HOM05D006768 ORTHO05D008436 3.6e-25 118.2 113 55.8
VMungo0647G1658 Vigna mungo HOM05D006768 ORTHO05D008436 6.1e-25 117.5 107 63.6
CDE08G1444 Ceratophyllum demersum HOM05D006768 ORTHO05D008436 1.0e-24 116.7 105 60.0
FAN20G0213 Fragaria x ananassa HOM05D000048 ORTHO05D004674 3.0e-24 115.2 89 70.8
CSS0018251 Camellia sinensis var. sinensis HOM05D006768 ORTHO05D008436 5.1e-24 114.4 86 73.3
AT4G08230 Arabidopsis thaliana HOM05D006768 ORTHO05D008436 1.1e-23 113.2 114 57.9
A03p28000 Brassica napus HOM05D006768 ORTHO05D008436 1.5e-23 112.8 107 62.6
C03p33820 Brassica napus HOM05D006768 ORTHO05D008436 1.5e-23 112.8 107 62.6
Carub.0006s2676 Capsella rubella HOM05D006768 ORTHO05D008436 2.0e-23 112.5 115 58.3
Zm00001eb011610 Zea mays HOM05D006768 ORTHO05D008436 2.0e-23 112.5 112 55.4
Peaxi162Scf00000g61010 Petunia axillaris HOM05D006768 ORTHO05D008436 7.4e-23 110.5 64 87.5
THA.LOC104806813 Tarenaya hassleriana HOM05D006768 ORTHO05D008436 1.3e-22 109.8 109 58.7
AL6G41870 Arabidopsis lyrata HOM05D006768 ORTHO05D008436 1.7e-22 109.4 113 59.3
Nitab4.5_0001142g0120 Nicotiana tabacum HOM05D006768 ORTHO05D008436 2.6e-20 102.1 94 61.7
SEGI_37020 Sequoiadendron giganteum HOM05D006768 ORTHO05D008436 4.5e-20 101.3 102 54.9
FAN27G1871 Fragaria x ananassa HOM05D000048 ORTHO05D004674 1.3e-19 99.8 78 71.8
Sabra05G0131600 Salix brachista HOM05D006768 ORTHO05D008436 5.0e-19 97.8 56 85.7
Ca_28007_v3 Cicer arietinum L. HOM05D006768 ORTHO05D008436 7.4e-15 84.0 82 62.2
AUR62023633 Chenopodium quinoa HOM05D006768 ORTHO05D008436 6.3e-14 80.9 69 66.7
Aa31LG9G14330 Aethionema arabicum HOM05D006768 ORTHO05D008436 5.3e-13 77.8 86 55.8
Mapoly0043s0020 Marchantia polymorpha HOM05D006768 ORTHO05D008436 1.0e-11 73.6 117 42.7
Pp3c13_12030 Physcomitrium patens HOM05D006768 ORTHO05D008436 1.3e-11 73.2 102 45.1
AagrBONN_evm.TU.Sc2ySwM_344.1603 Anthoceros agrestis HOM05D006768 ORTHO05D008436 5.5e-10 67.8 102 40.2
Nn1g08704 Nelumbo nucifera HOM05D006768 ORTHO05D008436 2.1e-09 65.9 50 70.0
DCAR_014111 Daucus carota HOM05D006768 ORTHO05D008436 4.8e-06 54.7 57 57.9


User provided reference genes

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