Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.02G156200 Manihot esculenta HOM05D007703 ORTHO05D009731 3.1e-37 157.9 78 100.0
Duzib116G0261 Durio zibethinus HOM05D007703 ORTHO05D009731 4.5e-28 127.5 78 83.3
Thecc.08G112500 Theobroma cacao HOM05D007703 ORTHO05D009731 5.0e-27 124.0 78 80.8
Gohir.D06G040000 Gossypium hirsutum HOM05D007703 ORTHO05D009731 8.5e-27 123.2 78 78.2
Gorai.010G044500 Gossypium raimondii HOM05D007703 ORTHO05D009731 8.5e-27 123.2 78 78.2
COL.COLO4_16476 Corchorus olitorius HOM05D007703 ORTHO05D009731 1.1e-26 122.9 78 79.5
PGR042G2694 Punica granatum HOM05D007703 ORTHO05D009731 5.5e-26 120.6 78 80.8
Gohir.A06G038300 Gossypium hirsutum HOM05D007703 ORTHO05D009731 7.2e-26 120.2 78 76.9
Potri.005G167200 Populus trichocarpa HOM05D007703 ORTHO05D009731 6.1e-25 117.1 78 75.6
CiPaw.05G232600 Carya illinoinensis HOM05D007703 ORTHO05D009731 1.8e-24 115.5 78 71.8
Sabra05G0127000 Salix brachista HOM05D007703 ORTHO05D009731 1.8e-24 115.5 74 74.3
Atru.chr13.1271 Acer truncatum HOM05D007703 ORTHO05D009731 2.3e-24 115.2 78 73.1
CsaV3_5G023730 Cucumis sativus L. HOM05D007703 ORTHO05D009731 3.0e-24 114.8 81 72.8
Aqoxy6G00561 Aquilegia oxysepala HOM05D007703 ORTHO05D009731 2.6e-23 111.7 78 69.2
Nn1g05271 Nelumbo nucifera HOM05D007703 ORTHO05D009731 2.6e-23 111.7 79 70.9
TWI56G0976 Tripterygium wilfordii HOM05D007703 ORTHO05D009731 3.4e-23 111.3 78 74.4
Eucgr.F00482 Eucalyptus grandis HOM05D007703 ORTHO05D009731 4.4e-23 110.9 78 70.5
Prupe.1G511400 Prunus persica HOM05D007703 ORTHO05D009731 4.4e-23 110.9 78 73.1
GSVIVG01008983001 Vitis vinifera HOM05D007703 ORTHO05D009731 1.3e-22 109.4 78 66.7
Cpa.g.sc66.97 Carica papaya HOM05D007703 ORTHO05D009731 2.8e-22 108.2 78 69.2
MSTRG.24946 Avicennia marina HOM05D007703 ORTHO05D009731 3.7e-22 107.8 81 69.1
Sed0022194 Sechium edule HOM05D007703 ORTHO05D009731 3.7e-22 107.8 78 69.2
Ciclev10003047m.g Citrus clementina HOM05D007703 ORTHO05D009731 4.9e-22 107.5 75 69.3
Nitab4.5_0000425g0040 Nicotiana tabacum HOM05D007703 ORTHO05D009731 4.9e-22 107.5 78 67.9
Nitab4.5_0002566g0010 Nicotiana tabacum HOM05D007703 ORTHO05D009731 8.3e-22 106.7 78 69.2
Sed0012287 Sechium edule HOM05D007703 ORTHO05D009731 1.1e-21 106.3 81 65.4
Ca_05260_v3 Cicer arietinum L. HOM05D007703 ORTHO05D009731 1.4e-21 105.9 77 71.4
Psat0s3920g0040 Pisum sativum HOM05D007703 ORTHO05D009731 1.4e-21 105.9 80 68.8
arahy.Tifrunner.gnm1.ann1.DJB4SG Arachis hypogaea HOM05D007703 ORTHO05D009731 1.8e-21 105.5 82 65.9
MELO3C022803.2 Cucumis melo HOM05D007703 ORTHO05D009731 1.8e-21 105.5 81 70.4
QL12p035855 Quercus lobata HOM05D007703 ORTHO05D009731 1.8e-21 105.5 77 70.1
Phvul.008G170600 Phaseolus vulgaris HOM05D007703 ORTHO05D009731 2.4e-21 105.1 78 66.7
arahy.Tifrunner.gnm1.ann1.0YA8SQ Arachis hypogaea HOM05D007703 ORTHO05D009731 4.1e-21 104.4 82 65.9
Sopen12g029570 Solanum pennellii HOM05D007703 ORTHO05D009731 4.1e-21 104.4 78 67.9
TPR.G1060 Trifolium pratense HOM05D007703 ORTHO05D009731 4.1e-21 104.4 80 67.5
Solyc12g056910.2 Solanum lycopersicum HOM05D007703 ORTHO05D009731 9.1e-21 103.2 78 67.9
Aa31LG7G6100 Aethionema arabicum HOM05D007703 ORTHO05D009731 1.2e-20 102.8 78 70.5
PGSC0003DMG400008548 Solanum tuberosum HOM05D007703 ORTHO05D009731 1.2e-20 102.8 78 65.4
RcHm_v2.0_Chr7g0240051 Rosa chinensis HOM05D007703 ORTHO05D009731 1.6e-20 102.4 78 70.5
Peaxi162Scf00160g01521 Petunia axillaris HOM05D007703 ORTHO05D009731 2.0e-20 102.1 78 69.2
TAR628G1160 Trochodendron aralioides HOM05D007703 ORTHO05D009731 2.0e-20 102.1 80 67.5
Hund26653 Selenicereus undatus HOM05D007703 ORTHO05D009731 4.5e-20 100.9 83 66.3
Lj1g0023708 Lotus japonicus HOM05D007703 ORTHO05D009731 5.9e-20 100.5 83 65.1
Cc10_g05880 Coffea canephora HOM05D007703 ORTHO05D009731 7.7e-20 100.1 81 64.2
Glyma.13G087000 Glycine max HOM05D007703 ORTHO05D009731 1.0e-19 99.8 78 64.1
Hma1.2p1_0120F.1_g057000 Hydrangea macrophylla HOM05D007703 ORTHO05D009731 1.7e-19 99.0 88 59.1
FvH4_5g38090 Fragaria vesca HOM05D007703 ORTHO05D009731 2.3e-19 98.6 79 68.4
vmacro21226 Vaccinium macrocarpon HOM05D007703 ORTHO05D009731 2.3e-19 98.6 81 66.7
Glyma.14G169200 Glycine max HOM05D007703 ORTHO05D009731 2.9e-19 98.2 78 62.8
Sc20g0003040 Simmondsia chinensis HOM05D007703 ORTHO05D009731 2.9e-19 98.2 78 62.8
HPP92_019111 Vanilla planifolia HOM05D007703 ORTHO05D009731 2.9e-19 98.2 76 64.5
Thhalv10009245m.g Eutrema salsugineum HOM05D007703 ORTHO05D009731 3.8e-19 97.8 78 64.1
Medtr5g061840 Medicago truncatula HOM05D007703 ORTHO05D009731 3.8e-19 97.8 76 67.1
CANSAT25G3270 Cannabis sativa HOM05D007703 ORTHO05D009731 8.6e-19 96.7 83 61.4
FAN13G1213 Fragaria x ananassa HOM05D007703 ORTHO05D009731 1.1e-18 96.3 79 67.1
SalBow7G3803 Salvia bowleyana HOM05D007703 ORTHO05D009731 1.1e-18 96.3 80 66.2
FAN04G3187 Fragaria x ananassa HOM05D007703 ORTHO05D009731 1.5e-18 95.9 79 67.1
Lalb_Chr04g0253231 Lupinus albus HOM05D007703 ORTHO05D009731 1.5e-18 95.9 82 63.4
Zm00001eb018670 Zea mays HOM05D007703 ORTHO05D009731 1.5e-18 95.9 62 72.6
AUR62034365 Chenopodium quinoa HOM05D007703 ORTHO05D009731 4.2e-18 94.4 78 65.4
BraA09t39737Z Brassica rapa HOM05D007703 ORTHO05D009731 5.5e-18 94.0 77 58.4
CDE10G0679 Ceratophyllum demersum HOM05D007703 ORTHO05D009731 5.5e-18 94.0 78 61.5
Os03g0385301 Oryza sativa ssp. japonica HOM05D007703 ORTHO05D009731 9.5e-18 93.2 82 62.2
BcaB07g32233 Brassica carinata HOM05D007703 ORTHO05D009731 1.2e-17 92.8 75 62.7
Sp1g19640 Schrenkiella parvula HOM05D007703 ORTHO05D009731 1.2e-17 92.8 78 62.8
CAN.G144.17 Capsicum annuum HOM05D007703 ORTHO05D009731 1.6e-17 92.4 66 69.7
AUR62022343 Chenopodium quinoa HOM05D007703 ORTHO05D009731 1.6e-17 92.4 78 64.1
A09p42620 Brassica napus HOM05D007703 ORTHO05D009731 2.1e-17 92.0 77 57.1
ECA232G3100 Erigeron canadensis HOM05D007703 ORTHO05D009731 4.7e-17 90.9 79 59.5
BcaC05g26138 Brassica carinata HOM05D007703 ORTHO05D009731 6.1e-17 90.5 75 62.7
C05p21240 Brassica napus HOM05D007703 ORTHO05D009731 6.1e-17 90.5 75 62.7
BolC5t30820H Brassica oleracea HOM05D007703 ORTHO05D009731 6.1e-17 90.5 75 62.7
Lsat_1_v5_gn_9_44720 Lactuca sativa HOM05D007703 ORTHO05D009731 8.0e-17 90.1 78 57.7
HanXRQChr05g0144121 Helianthus annuus HOM05D007703 ORTHO05D009731 1.0e-16 89.7 78 59.0
ClCG03G008950 Citrullus lanatus HOM05D007703 ORTHO05D009731 1.8e-16 89.0 122 45.9
PSO133G0107 Papaver somniferum HOM05D007703 ORTHO05D009731 2.3e-16 88.6 58 70.7
CARHR022490 Cardamine hirsuta HOM05D007703 ORTHO05D009731 3.0e-16 88.2 75 58.7
AT1G22140 Arabidopsis thaliana HOM05D007703 ORTHO05D009731 4.0e-16 87.8 70 62.9
SGA_v2.0_scaffold48G18018 Striga asiatica HOM05D007703 ORTHO05D009731 8.9e-16 86.7 91 56.0
EL10Ac1g01693 Beta vulgaris HOM05D007703 ORTHO05D009731 2.0e-15 85.5 73 61.6
Carub.0001s2169 Capsella rubella HOM05D007703 ORTHO05D009731 2.0e-15 85.5 78 57.7
Haze_00567 Corylus avellana HOM05D007703 ORTHO05D009731 2.0e-15 85.5 116 44.0
RcHm_v2.0_Chr2g0097791 Rosa chinensis HOM05D007703 ORTHO05D009731 2.0e-15 85.5 54 74.1
AL1G35580 Arabidopsis lyrata HOM05D007703 ORTHO05D009731 7.5e-15 83.6 78 56.4
Mapoly0023s0123 Marchantia polymorpha HOM05D007703 ORTHO05D009731 9.8e-15 83.2 57 66.7
Pp3c13_8980 Physcomitrium patens HOM05D007703 ORTHO05D009731 2.2e-14 82.0 77 53.2
ATR0564G384 Amborella trichopoda HOM05D007703 ORTHO05D009731 4.9e-14 80.9 62 61.3
SEGI_17524 Sequoiadendron giganteum HOM05D007703 ORTHO05D009731 4.9e-14 80.9 81 58.0
Ah.05g168540 Amaranthus hybridus HOM05D007703 ORTHO05D009731 1.7e-11 72.4 46 76.1
CDE10G0176 Ceratophyllum demersum HOM05D007703 ORTHO05D009731 2.8e-09 65.1 79 48.1
CSS0046153 Camellia sinensis var. sinensis HOM05D007703 ORTHO05D009731 8.0e-09 63.5 36 83.3
MBI02_g20368_MAGBIO Magnolia biondii HOM05D007703 ORTHO05D009731 3.4e-07 58.2 37 73.0


User provided reference genes

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