Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.02G154102 Manihot esculenta HOM05D000973 ORTHO05D250504 1.5e-51 206.1 118 100.0
Potri.005G166600 Populus trichocarpa HOM05D000973 ORTHO05D000652 2.8e-13 79.0 115 40.0
Manes.18G068700 Manihot esculenta HOM05D000973 ORTHO05D000652 1.4e-12 76.6 108 44.4
CiPaw.07G181500 Carya illinoinensis HOM05D000973 ORTHO05D000652 4.9e-10 68.2 123 39.8
TAR381G1313 Trochodendron aralioides HOM05D000973 ORTHO05D000652 4.9e-10 68.2 111 38.7
FAN08G1947 Fragaria x ananassa HOM05D000973 ORTHO05D000652 2.1e-08 62.8 92 39.1
MBI02_g42091_MAGBIO Magnolia biondii HOM05D000973 ORTHO05D000652 2.7e-08 62.4 122 33.6
MD15G1366200 Malus domestica HOM05D007232 ORTHO05D000652 3.5e-08 62.0 107 34.6
FvH4_5g37770 Fragaria vesca HOM05D000973 ORTHO05D000652 7.9e-08 60.8 92 38.0
FAN13G2686 Fragaria x ananassa HOM05D000973 ORTHO05D000652 7.9e-08 60.8 92 38.0
FAN18G1204 Fragaria x ananassa HOM05D000973 ORTHO05D000652 7.9e-08 60.8 92 38.0
TAR628G1220 Trochodendron aralioides HOM05D000973 ORTHO05D000652 1.0e-07 60.5 97 38.1
Cfa013620 Carpinus fangiana HOM05D000973 ORTHO05D000652 2.3e-07 59.3 105 47.6
MD15G1326600 Malus domestica HOM05D007232 ORTHO05D000652 2.3e-07 59.3 109 36.7
Hma1.2p1_0237F.1_g099320 Hydrangea macrophylla HOM05D000973 ORTHO05D000652 3.0e-07 58.9 110 36.4
Hma1.2p1_1783F.1_g302128 Hydrangea macrophylla HOM05D000973 ORTHO05D000652 3.0e-07 58.9 110 36.4
TWI56G1376 Tripterygium wilfordii HOM05D000973 ORTHO05D000652 3.0e-07 58.9 114 32.5
Duzib150G0577 Durio zibethinus HOM05D000973 ORTHO05D000652 3.9e-07 58.5 115 33.0
FAN04G1532 Fragaria x ananassa HOM05D000973 ORTHO05D000652 3.9e-07 58.5 92 37.0
RcHm_v2.0_Chr7g0239521 Rosa chinensis HOM05D000973 ORTHO05D000652 3.9e-07 58.5 82 39.0
Cpa.g.sc36.113 Carica papaya HOM05D000973 ORTHO05D000652 8.7e-07 57.4 90 36.7
RcHm_v2.0_Chr5g0049981 Rosa chinensis HOM05D000973 ORTHO05D000652 8.7e-07 57.4 92 33.7
MD01G1027300 Malus domestica HOM05D007232 ORTHO05D000652 1.5e-06 56.6 84 40.5
Nn1g05316 Nelumbo nucifera HOM05D000973 ORTHO05D000652 1.9e-06 56.2 92 46.7
Nn1g05317 Nelumbo nucifera HOM05D000973 ORTHO05D000652 1.9e-06 56.2 92 46.7
Sabra09G0124300 Salix brachista HOM05D005119 ORTHO05D006338 4.3e-06 55.1 105 29.5
Nitab4.5_0012011g0020 Nicotiana tabacum HOM05D000973 ORTHO05D000652 5.6e-06 54.7 90 31.1
Sopen04g024800 Solanum pennellii HOM05D007232 ORTHO05D000652 5.6e-06 54.7 78 41.0
PGR042G3281 Punica granatum HOM05D000973 ORTHO05D000652 7.4e-06 54.3 88 35.2
ATR0307G072 Amborella trichopoda HOM05D000973 ORTHO05D000652 9.6e-06 53.9 82 35.4
COL.COLO4_16431 Corchorus olitorius HOM05D007232 ORTHO05D000652 9.6e-06 53.9 71 42.3
FAN11G1009 Fragaria x ananassa HOM05D000973 ORTHO05D000652 9.6e-06 53.9 98 44.9


User provided reference genes

Program Settings