Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.02G149300 Manihot esculenta HOM05D008046 ORTHO05D004477 3.1e-63 245.4 162 100.0
Potri.002G100500 Populus trichocarpa HOM05D008046 ORTHO05D004477 1.2e-30 137.1 163 62.6
Manes.18G064000 Manihot esculenta HOM05D008046 ORTHO05D004477 5.9e-30 134.8 126 79.4
GSVIVG01009081001 Vitis vinifera HOM05D008046 ORTHO05D004477 1.0e-29 134.0 161 66.5
Thecc.08G102400 Theobroma cacao HOM05D008046 ORTHO05D004477 1.9e-28 129.8 165 64.8
Sabra02G0078700 Salix brachista HOM05D008046 ORTHO05D004477 2.5e-28 129.4 162 64.2
Potri.005G161700 Populus trichocarpa HOM05D008046 ORTHO05D004477 1.0e-26 124.0 162 63.0
QL02p002440 Quercus lobata HOM05D008046 ORTHO05D004477 1.8e-26 123.2 161 60.2
Duzib116G0877 Durio zibethinus HOM05D008046 ORTHO05D004477 6.3e-24 114.8 165 56.4
Cc10_g06700 Coffea canephora HOM05D008046 ORTHO05D004477 2.4e-23 112.8 160 55.6
PGR031G3049 Punica granatum HOM05D008046 ORTHO05D004477 2.0e-22 109.8 170 56.5
Duzib041G0197 Durio zibethinus HOM05D008046 ORTHO05D004477 5.9e-22 108.2 168 58.9
COL.COLO4_12009 Corchorus olitorius HOM05D008046 ORTHO05D004477 1.7e-21 106.7 172 53.5
Duzib093G0605 Durio zibethinus HOM05D008046 ORTHO05D004477 2.5e-20 102.8 159 66.0
TWI12G0518 Tripterygium wilfordii HOM05D008046 ORTHO05D004477 5.5e-20 101.7 151 50.3
CiPaw.16G033000 Carya illinoinensis HOM05D008046 ORTHO05D004477 1.2e-19 100.5 167 62.9
Haze_18268 Corylus avellana HOM05D008046 ORTHO05D004477 1.2e-19 100.5 156 59.6
Haze_18269 Corylus avellana HOM05D008046 ORTHO05D004477 1.2e-19 100.5 156 59.6
CiPaw.15G046100 Carya illinoinensis HOM05D008046 ORTHO05D004477 2.7e-19 99.4 166 59.6
TAR625G0942 Trochodendron aralioides HOM05D008046 ORTHO05D004477 3.6e-19 99.0 149 44.3
CSS0046665 Camellia sinensis var. sinensis HOM05D008046 ORTHO05D004477 2.3e-18 96.3 147 51.7
CSS0041686 Camellia sinensis var. sinensis HOM05D008046 ORTHO05D004477 6.8e-18 94.7 147 51.0
Gorai.005G094600 Gossypium raimondii HOM05D008046 ORTHO05D004477 1.2e-17 94.0 135 64.4
Hma1.2p1_1148F.1_g261600 Hydrangea macrophylla HOM05D008046 ORTHO05D004477 1.5e-17 93.6 153 47.7
Prupe.1G522800 Prunus persica HOM05D018381 ORTHO05D004477 1.5e-17 93.6 164 51.8
TAR381G0533 Trochodendron aralioides HOM05D008046 ORTHO05D004477 2.6e-17 92.8 160 49.4
CSS0043643 Camellia sinensis var. sinensis HOM05D008046 ORTHO05D004477 7.5e-17 91.3 148 56.1
Ciclev10002675m.g Citrus clementina HOM05D008046 ORTHO05D004477 1.3e-16 90.5 165 55.8
Gohir.A02G076800 Gossypium hirsutum HOM05D008046 ORTHO05D004477 1.7e-16 90.1 134 61.9
Oeu048965.1 Olea europaea HOM05D008046 ORTHO05D004477 1.7e-16 90.1 149 54.4
Lalb_Chr10g0102531 Lupinus albus HOM05D008046 ORTHO05D004477 2.2e-16 89.7 172 44.8
DCAR_019289 Daucus carota HOM05D008046 ORTHO05D004477 2.8e-16 89.4 146 60.3
Gohir.D02G084000 Gossypium hirsutum HOM05D008046 ORTHO05D004477 2.8e-16 89.4 142 61.3
Gohir.A01G132600 Gossypium hirsutum HOM05D008046 ORTHO05D004477 3.7e-16 89.0 151 43.0
Gohir.A05G265833 Gossypium hirsutum HOM05D008046 ORTHO05D004477 3.7e-16 89.0 156 42.9
Gorai.002G141100 Gossypium raimondii HOM05D008046 ORTHO05D004477 4.8e-16 88.6 148 52.7
Nn1g05455 Nelumbo nucifera HOM05D008046 ORTHO05D004477 6.3e-16 88.2 152 59.2
TAR628G0226 Trochodendron aralioides HOM05D008046 ORTHO05D004477 6.3e-16 88.2 148 54.7
CSS0034401 Camellia sinensis var. sinensis HOM05D008046 ORTHO05D004477 1.8e-15 86.7 153 50.3
CSS0039341 Camellia sinensis var. sinensis HOM05D008046 ORTHO05D004477 1.8e-15 86.7 153 49.7
Gohir.D05G267950 Gossypium hirsutum HOM05D008046 ORTHO05D004477 2.4e-15 86.3 156 41.7
Nn5g30002 Nelumbo nucifera HOM05D008176 ORTHO05D004477 3.1e-15 85.9 151 39.7
CSS0015684 Camellia sinensis var. sinensis HOM05D008046 ORTHO05D004477 2.7e-14 82.8 153 58.2
Gorai.009G280100 Gossypium raimondii HOM05D008046 ORTHO05D004477 1.7e-13 80.1 157 40.1
TPR.G24247 Trifolium pratense HOM05D008046 ORTHO05D004477 1.7e-13 80.1 147 51.7
Phvul.009G032900 Phaseolus vulgaris HOM05D008046 ORTHO05D004477 2.9e-13 79.3 154 48.1
TWI36G0888 Tripterygium wilfordii HOM05D008046 ORTHO05D004477 3.8e-13 79.0 149 55.0
Cpa.g.sc36.179 Carica papaya HOM05D008046 ORTHO05D004477 1.1e-12 77.4 150 60.7
Glyma.06G100900 Glycine max HOM05D008046 ORTHO05D004477 1.1e-12 77.4 161 54.0
Lsat_1_v5_gn_1_3180 Lactuca sativa HOM05D008046 ORTHO05D004477 2.5e-12 76.3 157 46.5
Lalb_Chr23g0270371 Lupinus albus HOM05D008046 ORTHO05D004477 2.5e-12 76.3 167 50.9
Medtr3g099490 Medicago truncatula HOM05D008046 ORTHO05D004477 2.5e-12 76.3 147 55.8
SalBow5G1479 Salvia bowleyana HOM05D008046 ORTHO05D004477 1.2e-11 73.9 157 43.3
Solyc04g074680.1 Solanum lycopersicum HOM05D010872 ORTHO05D004477 1.2e-11 73.9 156 43.6
Lalb_Chr08g0242201 Lupinus albus HOM05D008046 ORTHO05D004477 4.7e-11 72.0 171 50.3
FAN04G3140 Fragaria x ananassa HOM05D018381 ORTHO05D004477 1.4e-10 70.5 174 48.3
FAN13G0458 Fragaria x ananassa HOM05D018381 ORTHO05D004477 1.4e-10 70.5 174 48.3
FAN18G3731 Fragaria x ananassa HOM05D018381 ORTHO05D004477 1.4e-10 70.5 174 50.6
FAN08G1425 Fragaria x ananassa HOM05D018381 ORTHO05D004477 1.8e-10 70.1 174 47.7
unitig_32.g11784 Utricularia gibba HOM05D008046 ORTHO05D004477 3.0e-10 69.3 142 45.1
FvH4_5g36590 Fragaria vesca HOM05D018381 ORTHO05D004477 4.0e-10 68.9 174 49.4
Haze_24851 Corylus avellana HOM05D008176 ORTHO05D004477 8.8e-10 67.8 138 55.1
Medtr5g064640 Medicago truncatula HOM05D008046 ORTHO05D004477 8.8e-10 67.8 153 37.3
CiPaw.03G145800 Carya illinoinensis HOM05D008176 ORTHO05D004477 1.2e-09 67.4 152 36.2
Eucgr.B00040 Eucalyptus grandis HOM05D008046 ORTHO05D004477 2.0e-09 66.6 174 42.0
VMungo0647G1155 Vigna mungo HOM05D008046 ORTHO05D004477 2.6e-09 66.2 170 45.9
QL06p048130 Quercus lobata HOM05D008176 ORTHO05D004477 5.7e-09 65.1 150 32.7
Sed0027320 Sechium edule HOM05D026294 ORTHO05D004477 9.8e-09 64.3 161 44.1
Lj1g0004298 Lotus japonicus HOM05D008046 ORTHO05D004477 2.2e-08 63.2 164 47.0
RcHm_v2.0_Chr7g0242321 Rosa chinensis HOM05D018381 ORTHO05D004477 3.7e-08 62.4 163 45.4
Ca_08988_v3 Cicer arietinum L. HOM05D008176 ORTHO05D004477 4.9e-08 62.0 146 32.9
Glyma.02G209200 Glycine max HOM05D008046 ORTHO05D004477 6.3e-08 61.6 171 44.4
Lsat_1_v5_gn_6_104300 Lactuca sativa HOM05D008046 ORTHO05D004477 6.3e-08 61.6 128 49.2
Hma1.2p1_0019F.1_g013800 Hydrangea macrophylla HOM05D013332 ORTHO05D004477 8.3e-08 61.2 165 49.7
CANSAT25G2152 Cannabis sativa HOM05D008046 ORTHO05D004477 1.1e-07 60.8 50 58.0
Glyma.04G099200 Glycine max HOM05D008046 ORTHO05D004477 1.4e-07 60.5 173 42.8
Aqoxy6G00716 Aquilegia oxysepala HOM05D008046 ORTHO05D004477 2.4e-07 59.7 140 48.6
SGA_v2.0_scaffold45G17135 Striga asiatica HOM05D010872 ORTHO05D004477 2.4e-07 59.7 51 52.9
Phvul.008G176900 Phaseolus vulgaris HOM05D008046 ORTHO05D004477 3.1e-07 59.3 160 51.9
MSTRG.3689 Avicennia marina HOM05D008046 ORTHO05D004477 4.1e-07 58.9 155 38.1
Glyma.14G177400 Glycine max HOM05D008046 ORTHO05D004477 5.4e-07 58.5 164 44.5
Thecc.01G095600 Theobroma cacao HOM05D008176 ORTHO05D004477 5.4e-07 58.5 139 34.5
Sopen04g029650 Solanum pennellii HOM05D010872 ORTHO05D013672 7.0e-07 58.2 146 41.1
CiPaw.04G103600 Carya illinoinensis HOM05D008176 ORTHO05D004477 9.2e-07 57.8 137 32.8
PGSC0003DMG400017769 Solanum tuberosum HOM05D059644 ORTHO05D004477 9.2e-07 57.8 129 52.7
THA.LOC104800226 Tarenaya hassleriana HOM05D009138 ORTHO05D011294 9.2e-07 57.8 42 59.5
Nitab4.5_0012818g0010 Nicotiana tabacum HOM05D008176 ORTHO05D004477 1.2e-06 57.4 142 40.1
Sc23g0000380 Simmondsia chinensis HOM05D008046 ORTHO05D004477 1.6e-06 57.0 140 29.3
Gohir.A02G129700 Gossypium hirsutum HOM05D008176 ORTHO05D004477 3.5e-06 55.8 151 33.1
Aa31LG6G8650 Aethionema arabicum HOM05D010872 ORTHO05D013672 4.5e-06 55.5 47 53.2
COL.COLO4_27295 Corchorus olitorius HOM05D008176 ORTHO05D004477 4.5e-06 55.5 136 32.4
PGSC0003DMG400016792 Solanum tuberosum HOM05D008176 ORTHO05D004477 4.5e-06 55.5 138 47.1
THA.LOC104809723 Tarenaya hassleriana HOM05D009138 ORTHO05D011294 4.5e-06 55.5 43 60.5
Atru.chr3.1344 Acer truncatum HOM05D008176 ORTHO05D004477 5.9e-06 55.1 142 35.2
Dinv13234 Davidia involucrata HOM05D008176 ORTHO05D004477 5.9e-06 55.1 124 39.5
Psat0s5249g0040 Pisum sativum HOM05D008046 ORTHO05D004477 5.9e-06 55.1 133 56.4
Cfa002600 Carpinus fangiana HOM05D008176 ORTHO05D004477 7.7e-06 54.7 131 56.5
ClCG00G004400 Citrullus lanatus HOM05D037353 ORTHO05D034654 7.7e-06 54.7 27 85.2


User provided reference genes

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