Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.02G137400 Manihot esculenta HOM05D000049 ORTHO05D008785 4.0e-70 268.1 144 100.0
Duzib132G0396 Durio zibethinus HOM05D000049 ORTHO05D008785 2.1e-47 192.6 143 73.4
Duzib248G1051 Durio zibethinus HOM05D000049 ORTHO05D008785 1.8e-46 189.5 145 72.4
Thecc.02G106900 Theobroma cacao HOM05D000049 ORTHO05D008785 2.3e-46 189.1 145 73.1
Atru.chr5.2581 Acer truncatum HOM05D000049 ORTHO05D008785 1.5e-45 186.4 145 73.1
Potri.001G301100 Populus trichocarpa HOM05D000049 ORTHO05D008785 9.8e-45 183.7 144 71.5
Potri.009G096800 Populus trichocarpa HOM05D000049 ORTHO05D008785 6.4e-44 181.0 144 69.4
Sabra16G0189300 Salix brachista HOM05D000049 ORTHO05D008785 1.1e-43 180.3 144 69.4
Atru.chr11.1081 Acer truncatum HOM05D000049 ORTHO05D008785 9.2e-43 177.2 144 72.2
Gohir.D02G207500 Gossypium hirsutum HOM05D000049 ORTHO05D008785 9.2e-43 177.2 146 67.8
Ciclev10029534m.g Citrus clementina HOM05D000049 ORTHO05D008785 2.1e-42 176.0 145 71.7
Gorai.005G235400 Gossypium raimondii HOM05D000049 ORTHO05D008785 4.6e-42 174.9 146 67.1
Hma1.2p1_0796F.1_g219130 Hydrangea macrophylla HOM05D000049 ORTHO05D008785 7.8e-42 174.1 143 72.0
Gohir.A03G186700 Gossypium hirsutum HOM05D000049 ORTHO05D008785 1.0e-41 173.7 146 67.1
Cc02_g19180 Coffea canephora HOM05D000049 ORTHO05D008785 1.3e-41 173.3 145 67.6
Dinv42184 Davidia involucrata HOM05D000049 ORTHO05D008785 3.0e-41 172.2 136 73.5
QL11p033983 Quercus lobata HOM05D000049 ORTHO05D008785 1.1e-40 170.2 144 65.3
Cpa.g.sc106.84 Carica papaya HOM05D000049 ORTHO05D008785 5.6e-40 167.9 147 69.4
VMungo0720G1000 Vigna mungo HOM05D000049 ORTHO05D008785 7.3e-40 167.5 144 66.0
GSVIVG01003167001 Vitis vinifera HOM05D000049 ORTHO05D008785 2.8e-39 165.6 150 68.7
Cfa004569 Carpinus fangiana HOM05D000049 ORTHO05D008785 4.7e-39 164.9 147 66.7
PGR042G1228 Punica granatum HOM05D000049 ORTHO05D008785 4.7e-39 164.9 147 65.3
Haze_10161 Corylus avellana HOM05D000049 ORTHO05D008785 6.2e-39 164.5 147 66.7
Phvul.007G038900 Phaseolus vulgaris HOM05D000049 ORTHO05D008785 6.2e-39 164.5 144 64.6
EL10Ac9g22295 Beta vulgaris HOM05D000049 ORTHO05D008785 1.4e-38 163.3 145 62.1
Prupe.8G134100 Prunus persica HOM05D000049 ORTHO05D008785 3.1e-38 162.2 145 66.2
Nn1g04714 Nelumbo nucifera HOM05D000049 ORTHO05D008785 2.0e-37 159.5 136 67.6
Aqoxy5G01153 Aquilegia oxysepala HOM05D000049 ORTHO05D008785 2.6e-37 159.1 130 67.7
CANSAT25G0973 Cannabis sativa HOM05D000049 ORTHO05D008785 3.4e-37 158.7 145 64.8
Glyma.10G263000 Glycine max HOM05D000049 ORTHO05D008785 3.4e-37 158.7 144 65.3
Glyma.20G127500 Glycine max HOM05D000049 ORTHO05D008785 3.4e-37 158.7 144 63.9
Sc08g0001450 Simmondsia chinensis HOM05D000049 ORTHO05D008785 3.4e-37 158.7 146 63.0
AUR62010281 Chenopodium quinoa HOM05D000049 ORTHO05D008785 5.8e-37 157.9 145 60.7
AUR62039109 Chenopodium quinoa HOM05D000049 ORTHO05D008785 5.8e-37 157.9 145 62.1
Sed0018040 Sechium edule HOM05D000049 ORTHO05D008785 1.3e-36 156.8 145 63.4
Solyc01g107660.3 Solanum lycopersicum HOM05D000049 ORTHO05D008785 1.7e-36 156.4 146 63.7
CsaV3_7G008250 Cucumis sativus L. HOM05D000049 ORTHO05D008785 2.9e-36 155.6 145 61.4
TWI31G0015 Tripterygium wilfordii HOM05D000049 ORTHO05D008785 2.9e-36 155.6 145 64.8
Eucgr.H03224 Eucalyptus grandis HOM05D000049 ORTHO05D008785 3.7e-36 155.2 145 62.1
Ah.01g018130 Amaranthus hybridus HOM05D000049 ORTHO05D008785 4.9e-36 154.8 146 64.4
Actinidia27967 Actinidia chinensis HOM05D000049 ORTHO05D008785 6.4e-36 154.5 145 63.4
RcHm_v2.0_Chr6g0255531 Rosa chinensis HOM05D000049 ORTHO05D008785 6.4e-36 154.5 145 65.5
FvH4_2g05321 Fragaria vesca HOM05D000049 ORTHO05D008785 8.3e-36 154.1 145 62.8
MD05G1088100 Malus domestica HOM05D000049 ORTHO05D008785 8.3e-36 154.1 145 61.4
THA.LOC104819560 Tarenaya hassleriana HOM05D000049 ORTHO05D008785 1.1e-35 153.7 147 59.2
Oeu010393.1 Olea europaea HOM05D000049 ORTHO05D008785 2.4e-35 152.5 149 63.8
ClCG02G006290 Citrullus lanatus HOM05D000049 ORTHO05D008785 3.2e-35 152.1 146 63.0
CANSAT25G0620 Cannabis sativa HOM05D000049 ORTHO05D008785 4.1e-35 151.8 143 62.2
Glyma.20G129600 Glycine max HOM05D000049 ORTHO05D008785 4.1e-35 151.8 144 60.4
CiPaw.06G170000 Carya illinoinensis HOM05D000049 ORTHO05D008785 7.1e-35 151.0 144 61.8
Psat6g219680 Pisum sativum HOM05D000049 ORTHO05D008785 9.2e-35 150.6 144 57.6
PGSC0003DMG400025866 Solanum tuberosum HOM05D000049 ORTHO05D008785 9.2e-35 150.6 146 62.3
CSS0023695 Camellia sinensis var. sinensis HOM05D000049 ORTHO05D008785 1.2e-34 150.2 145 63.4
FAN20G0640 Fragaria x ananassa HOM05D000049 ORTHO05D008785 1.6e-34 149.8 145 61.4
TAR381G1170 Trochodendron aralioides HOM05D000049 ORTHO05D008785 1.6e-34 149.8 143 59.4
Nitab4.5_0002815g0100 Nicotiana tabacum HOM05D000049 ORTHO05D008785 2.1e-34 149.4 146 63.0
SGA_v2.0_scaffold393G50708 Striga asiatica HOM05D000049 ORTHO05D008785 4.6e-34 148.3 131 64.9
Hund06332 Selenicereus undatus HOM05D000049 ORTHO05D008785 7.8e-34 147.5 147 59.9
TPR.G13867 Trifolium pratense HOM05D000049 ORTHO05D008785 1.0e-33 147.1 148 60.1
Lj5g0006015 Lotus japonicus HOM05D000049 ORTHO05D008785 1.7e-33 146.4 145 58.6
Lalb_Chr02g0145351 Lupinus albus HOM05D000049 ORTHO05D008785 1.7e-33 146.4 145 57.9
SalBow3G3686 Salvia bowleyana HOM05D000049 ORTHO05D008785 5.1e-33 144.8 108 77.8
CAN.G1231.12 Capsicum annuum HOM05D000049 ORTHO05D008785 1.5e-32 143.3 146 61.0
Aa31LG2G16660 Aethionema arabicum HOM05D000049 ORTHO05D008785 2.5e-32 142.5 149 59.7
A01p04250 Brassica napus HOM05D000049 ORTHO05D008785 3.3e-32 142.1 150 60.7
BraA01t00414Z Brassica rapa HOM05D000049 ORTHO05D008785 3.3e-32 142.1 150 60.7
Peaxi162Scf00016g02238 Petunia axillaris HOM05D000049 ORTHO05D008785 3.3e-32 142.1 146 61.0
AT4G34190 Arabidopsis thaliana HOM05D000049 ORTHO05D008785 4.3e-32 141.7 149 57.7
CDE02G2484 Ceratophyllum demersum HOM05D000049 ORTHO05D008785 5.6e-32 141.4 144 59.7
C01p04640 Brassica napus HOM05D000049 ORTHO05D008785 9.5e-32 140.6 150 60.0
BolC1t00447H Brassica oleracea HOM05D000049 ORTHO05D008785 9.5e-32 140.6 150 60.0
BcaNung03801 Brassica carinata HOM05D000049 ORTHO05D008785 1.2e-31 140.2 150 60.0
CSS0024818 Camellia sinensis var. sinensis HOM05D000049 ORTHO05D008785 1.2e-31 140.2 131 63.4
HanXRQChr03g0070281 Helianthus annuus HOM05D000049 ORTHO05D008785 1.2e-31 140.2 122 66.4
Oeu018599.1 Olea europaea HOM05D000049 ORTHO05D008785 1.2e-31 140.2 179 52.5
CiPaw.05G010600 Carya illinoinensis HOM05D000049 ORTHO05D008785 1.6e-31 139.8 102 72.5
ECA240G2980 Erigeron canadensis HOM05D000049 ORTHO05D000027 1.6e-31 139.8 147 57.8
arahy.Tifrunner.gnm1.ann1.MU25MQ Arachis hypogaea HOM05D000049 ORTHO05D008785 2.8e-31 139.0 94 75.5
Carub.0007s0619 Capsella rubella HOM05D000049 ORTHO05D008785 3.6e-31 138.7 151 55.0
arahy.Tifrunner.gnm1.ann1.KJA62A Arachis hypogaea HOM05D000049 ORTHO05D008785 4.7e-31 138.3 161 53.4
CSS0021501 Camellia sinensis var. sinensis HOM05D000049 ORTHO05D008785 8.1e-31 137.5 131 62.6
Migut.N01171 Erythranthe guttata HOM05D000049 ORTHO05D008785 8.1e-31 137.5 130 60.0
Nitab4.5_0005392g0020 Nicotiana tabacum HOM05D000049 ORTHO05D008785 1.1e-30 137.1 147 59.9
THA.LOC104807247 Tarenaya hassleriana HOM05D000049 ORTHO05D008785 1.1e-30 137.1 147 54.4
AL7G17120 Arabidopsis lyrata HOM05D000049 ORTHO05D008785 2.4e-30 136.0 146 54.8
CARHR242610 Cardamine hirsuta HOM05D000049 ORTHO05D008785 2.4e-30 136.0 151 56.3
Thhalv10026482m.g Eutrema salsugineum HOM05D000049 ORTHO05D008785 5.2e-30 134.8 155 55.5
Sp7g31960 Schrenkiella parvula HOM05D000049 ORTHO05D008785 6.8e-30 134.4 149 55.7
MSTRG.5347 Avicennia marina HOM05D000049 ORTHO05D008785 1.2e-29 133.7 112 65.2
Migut.B00381 Erythranthe guttata HOM05D000049 ORTHO05D008785 2.6e-29 132.5 134 56.0
FAN24G0707 Fragaria x ananassa HOM05D000049 ORTHO05D008785 4.4e-29 131.7 132 59.1
Dinv15757 Davidia involucrata HOM05D000049 ORTHO05D008785 1.1e-27 127.1 117 62.4
FAN15G1433 Fragaria x ananassa HOM05D000049 ORTHO05D008785 1.1e-27 127.1 132 56.8
Sabra09G0074400 Salix brachista HOM05D000049 ORTHO05D008785 1.4e-27 126.7 141 54.6
Medtr1g107490 Medicago truncatula HOM05D000049 ORTHO05D008785 4.1e-27 125.2 131 55.0
PSO210G6109 Papaver somniferum HOM05D000049 ORTHO05D008785 9.2e-27 124.0 146 53.4
PSO170G1282 Papaver somniferum HOM05D000049 ORTHO05D008785 2.7e-26 122.5 151 53.0
unitig_22.g6845 Utricularia gibba HOM05D000049 ORTHO05D008785 1.3e-25 120.2 93 66.7
HPP92_004768 Vanilla planifolia HOM05D000049 ORTHO05D008785 2.3e-25 119.4 144 48.6
DCAR_030806 Daucus carota HOM05D000049 ORTHO05D008785 1.5e-24 116.7 92 63.0
MELO3C018482.2 Cucumis melo HOM05D000049 ORTHO05D000027 2.4e-22 109.4 86 68.6
SEGI_21574 Sequoiadendron giganteum HOM05D000049 ORTHO05D008785 1.5e-21 106.7 98 57.1
TAR376G0829 Trochodendron aralioides HOM05D000049 ORTHO05D008785 3.4e-21 105.5 83 66.3
vmacro19520 Vaccinium macrocarpon HOM05D000049 ORTHO05D008785 1.3e-20 103.6 113 49.6
Hund00143 Selenicereus undatus HOM05D000049 ORTHO05D008785 2.2e-20 102.8 63 81.0
Zm00001eb048670 Zea mays HOM05D000049 ORTHO05D008785 4.9e-20 101.7 79 62.0
FAN27G0752 Fragaria x ananassa HOM05D000049 ORTHO05D000027 5.6e-16 88.2 111 51.4
Pp3c1_21810 Physcomitrium patens HOM05D000049 ORTHO05D008785 7.3e-16 87.8 101 47.5
Os11g0621400 Oryza sativa ssp. japonica HOM05D000049 ORTHO05D008785 1.6e-15 86.7 98 48.0
Mapoly0006s0145 Marchantia polymorpha HOM05D000049 ORTHO05D008785 3.6e-15 85.5 80 57.5
SMO340G0196 Selaginella moellendorffii HOM05D000049 ORTHO05D008785 1.4e-14 83.6 76 56.6
TAR628G1275 Trochodendron aralioides HOM05D000049 ORTHO05D008785 1.4e-14 83.6 92 52.2
ATR0691G295 Amborella trichopoda HOM05D000049 ORTHO05D008785 1.5e-13 80.1 55 76.4
AagrBONN_evm.TU.Sc2ySwM_117.2783 Anthoceros agrestis HOM05D000049 ORTHO05D008785 2.0e-13 79.7 82 50.0
SalBow6G4602 Salvia bowleyana HOM05D010989 ORTHO05D013112 1.3e-12 77.0 104 51.9
COL.COLO4_15744 Corchorus olitorius HOM05D001416 ORTHO05D002549 1.1e-08 63.9 34 88.2


User provided reference genes

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