Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.02G137000 Manihot esculenta HOM05D002956 ORTHO05D009000 2.5e-175 618.6 307 100.0
Potri.009G068300 Populus trichocarpa HOM05D002956 ORTHO05D009000 2.8e-105 386.0 295 69.2
Sabra09G0051400 Salix brachista HOM05D002956 ORTHO05D009000 9.3e-101 370.9 305 64.6
TAR633G2508 Trochodendron aralioides HOM05D002956 ORTHO05D009000 4.0e-88 328.9 295 59.7
CSS0047298 Camellia sinensis var. sinensis HOM05D002956 ORTHO05D009000 6.9e-88 328.2 297 59.6
Thecc.09G246200 Theobroma cacao HOM05D002956 ORTHO05D009000 2.0e-87 326.6 285 60.7
Cfa009899 Carpinus fangiana HOM05D002956 ORTHO05D009000 7.6e-87 324.7 301 61.1
Dinv04582 Davidia involucrata HOM05D000102 ORTHO05D000138 1.1e-85 320.9 283 61.5
Hma1.2p1_0460F.1_g157580 Hydrangea macrophylla HOM05D002956 ORTHO05D009000 2.7e-84 316.2 302 57.6
Cpa.g.sc34.182 Carica papaya HOM05D002956 ORTHO05D009000 3.9e-83 312.4 273 61.5
Aqoxy2G00440 Aquilegia oxysepala HOM05D002956 ORTHO05D009000 1.9e-82 310.1 290 59.0
Atru.chr3.2859 Acer truncatum HOM05D002956 ORTHO05D009000 3.3e-82 309.3 221 71.0
CANSAT54G2237 Cannabis sativa HOM05D002956 ORTHO05D009000 5.6e-82 308.5 263 58.2
Lj6g0021242 Lotus japonicus HOM05D002956 ORTHO05D009000 6.2e-81 305.1 284 58.1
MBI19_g19212_MAGBIO Magnolia biondii HOM05D002956 ORTHO05D009000 6.2e-81 305.1 251 62.5
Duzib150G0064 Durio zibethinus HOM05D002956 ORTHO05D009000 8.1e-81 304.7 283 59.4
QL01p016676 Quercus lobata HOM05D002956 ORTHO05D009000 1.2e-79 300.8 290 57.2
GSVIVG01037339001 Vitis vinifera HOM05D002956 ORTHO05D009000 1.5e-79 300.4 184 76.6
Eucgr.B03751 Eucalyptus grandis HOM05D002956 ORTHO05D009000 2.6e-79 299.7 317 53.9
Actinidia06979 Actinidia chinensis HOM05D002956 ORTHO05D009000 4.5e-79 298.9 299 56.2
TWI31G1447 Tripterygium wilfordii HOM05D002956 ORTHO05D009000 4.5e-79 298.9 286 56.6
Phvul.005G020500 Phaseolus vulgaris HOM05D002956 ORTHO05D009000 1.3e-78 297.4 290 56.2
Cc01_g06260 Coffea canephora HOM05D002956 ORTHO05D009000 1.7e-78 297.0 233 66.5
Ciclev10016188m.g Citrus clementina HOM05D002956 ORTHO05D009000 2.2e-78 296.6 227 65.6
PGR102G2739 Punica granatum HOM05D002956 ORTHO05D009000 6.5e-78 295.0 290 54.8
RcHm_v2.0_Chr5g0050271 Rosa chinensis HOM05D002956 ORTHO05D009000 8.4e-78 294.7 264 61.0
Gohir.A05G073600 Gossypium hirsutum HOM05D002956 ORTHO05D009000 1.1e-77 294.3 230 64.3
CsaV3_6G038840 Cucumis sativus L. HOM05D002956 ORTHO05D009000 1.9e-77 293.5 276 59.1
Haze_23260 Corylus avellana HOM05D002956 ORTHO05D009000 3.2e-77 292.7 369 49.6
Glyma.08G154600 Glycine max HOM05D002956 ORTHO05D009000 3.2e-77 292.7 293 55.6
Gohir.D05G076500 Gossypium hirsutum HOM05D002956 ORTHO05D009000 3.2e-77 292.7 271 58.3
Gorai.009G077800 Gossypium raimondii HOM05D002956 ORTHO05D009000 3.2e-77 292.7 271 58.3
VMungo1080G0193 Vigna mungo HOM05D002956 ORTHO05D009000 4.2e-77 292.4 262 59.5
TPR.G11887 Trifolium pratense HOM05D002956 ORTHO05D009000 5.5e-77 292.0 224 65.6
Lalb_Chr15g0078501 Lupinus albus HOM05D002956 ORTHO05D009000 1.2e-76 290.8 281 56.2
MD00G1134800 Malus domestica HOM05D002956 ORTHO05D009000 1.2e-76 290.8 235 65.1
Migut.D00676 Erythranthe guttata HOM05D002956 ORTHO05D009000 2.7e-76 289.7 284 55.3
MSTRG.17638 Avicennia marina HOM05D002956 ORTHO05D009000 4.6e-76 288.9 261 60.2
CDE08G0764 Ceratophyllum demersum HOM05D002956 ORTHO05D009000 6.0e-76 288.5 232 62.9
MD00G1148000 Malus domestica HOM05D002956 ORTHO05D009000 7.9e-76 288.1 277 58.8
ATR0307G004 Amborella trichopoda HOM05D002956 ORTHO05D009000 1.0e-75 287.7 226 63.3
Aa31LG5G8950 Aethionema arabicum HOM05D002956 ORTHO05D009000 1.8e-75 287.0 271 56.8
Migut.N02380 Erythranthe guttata HOM05D002956 ORTHO05D009000 1.8e-75 287.0 207 70.0
PSO339G4249 Papaver somniferum HOM05D002956 ORTHO05D009000 3.0e-75 286.2 218 67.9
MELO3C014549.2 Cucumis melo HOM05D002956 ORTHO05D009000 3.9e-75 285.8 292 56.2
Glyma.15G273500 Glycine max HOM05D002956 ORTHO05D009000 6.7e-75 285.0 280 55.4
HPP92_025063 Vanilla planifolia HOM05D002956 ORTHO05D009000 1.1e-74 284.3 264 57.6
PSO384G3893 Papaver somniferum HOM05D002956 ORTHO05D009000 3.3e-74 282.7 218 66.5
Lsat_1_v5_gn_5_63121 Lactuca sativa HOM05D002956 ORTHO05D009000 7.4e-74 281.6 253 58.5
Medtr3g437110 Medicago truncatula HOM05D002956 ORTHO05D009000 9.6e-74 281.2 285 54.7
arahy.Tifrunner.gnm1.ann1.UED96S Arachis hypogaea HOM05D002956 ORTHO05D009000 1.6e-73 280.4 222 65.3
AUR62006560 Chenopodium quinoa HOM05D002956 ORTHO05D009000 2.1e-73 280.0 225 63.1
SGA_v2.0_scaffold29G12222 Striga asiatica HOM05D002956 ORTHO05D009000 2.8e-73 279.6 292 54.5
EL10Ac4g10093 Beta vulgaris HOM05D002956 ORTHO05D009000 4.8e-73 278.9 260 60.8
Solyc01g008700.4 Solanum lycopersicum HOM05D002956 ORTHO05D009000 6.3e-73 278.5 289 53.3
Sopen01g004220 Solanum pennellii HOM05D002956 ORTHO05D009000 1.1e-72 277.7 224 63.8
Ah.06g194750 Amaranthus hybridus HOM05D002956 ORTHO05D009000 2.4e-72 276.6 283 55.1
Ca_26337_v3 Cicer arietinum L. HOM05D002956 ORTHO05D009000 2.4e-72 276.6 211 64.5
unitig_8.g3652 Utricularia gibba HOM05D002956 ORTHO05D009000 2.4e-72 276.6 205 66.3
arahy.Tifrunner.gnm1.ann1.NKUQ81 Arachis hypogaea HOM05D002956 ORTHO05D009000 3.1e-72 276.2 220 65.0
THA.LOC104826457 Tarenaya hassleriana HOM05D002956 ORTHO05D009000 3.1e-72 276.2 278 55.8
AUR62000215 Chenopodium quinoa HOM05D002956 ORTHO05D009000 5.3e-72 275.4 225 61.3
FAN27G0310 Fragaria x ananassa HOM05D002956 ORTHO05D009000 5.3e-72 275.4 261 59.8
FAN20G2737 Fragaria x ananassa HOM05D002956 ORTHO05D009000 1.5e-71 273.9 271 57.2
FAN22G1360 Fragaria x ananassa HOM05D002956 ORTHO05D009000 1.5e-71 273.9 242 62.4
Sc16g0010930 Simmondsia chinensis HOM05D002956 ORTHO05D009000 2.0e-71 273.5 237 60.8
PGSC0003DMG400004431 Solanum tuberosum HOM05D002956 ORTHO05D009000 5.9e-71 271.9 219 63.9
FvH4_2g35650 Fragaria vesca HOM05D002956 ORTHO05D009000 7.6e-71 271.6 240 62.5
Oeu027216.2 Olea europaea HOM05D002956 ORTHO05D009000 7.6e-71 271.6 275 54.9
ECA233G2896 Erigeron canadensis HOM05D000003 ORTHO05D009000 6.5e-70 268.5 180 71.7
FAN15G3287 Fragaria x ananassa HOM05D002956 ORTHO05D009000 6.5e-70 268.5 240 61.7
Peaxi162Scf00032g02025 Petunia axillaris HOM05D002956 ORTHO05D009000 2.5e-69 266.5 322 49.4
Thhalv10002070m.g Eutrema salsugineum HOM05D002956 ORTHO05D009000 5.5e-69 265.4 265 57.0
SalBow6G2483 Salvia bowleyana HOM05D002956 ORTHO05D009000 7.2e-69 265.0 297 50.2
BcaC01g04913 Brassica carinata HOM05D002956 ORTHO05D008031 2.7e-68 263.1 272 55.1
BolC3t15559H Brassica oleracea HOM05D002956 ORTHO05D008031 3.6e-68 262.7 265 56.6
A03p26830 Brassica napus HOM05D002956 ORTHO05D008031 6.1e-68 261.9 267 56.6
C03p32170 Brassica napus HOM05D002956 ORTHO05D008031 7.9e-68 261.5 272 54.8
BraA03t11895Z Brassica rapa HOM05D002956 ORTHO05D008031 1.0e-67 261.2 267 56.2
HanXRQChr12g0380431 Helianthus annuus HOM05D002956 ORTHO05D009000 1.8e-67 260.4 223 58.3
BcaB01g03033 Brassica carinata HOM05D002956 ORTHO05D008031 8.7e-67 258.1 254 55.9
Thhalv10002099m.g Eutrema salsugineum HOM05D002956 ORTHO05D009000 1.5e-66 257.3 186 70.4
Rhsim13G0206200 Rhododendron simsii HOM05D002956 ORTHO05D009000 1.5e-66 257.3 428 39.0
Carub.0004s0731 Capsella rubella HOM05D002956 ORTHO05D009000 1.9e-66 256.9 263 55.1
AL4G20050 Arabidopsis lyrata HOM05D002956 ORTHO05D009000 2.5e-66 256.5 262 55.7
DCAR_006895 Daucus carota HOM05D002956 ORTHO05D009000 7.4e-66 255.0 254 56.3
Nitab4.5_0000390g0150 Nicotiana tabacum HOM05D002956 ORTHO05D009000 2.6e-63 246.5 292 49.3
AT2G26840 Arabidopsis thaliana HOM05D002956 ORTHO05D009000 3.6e-60 236.1 315 45.7
Sp4g08630 Schrenkiella parvula HOM05D002956 ORTHO05D009000 1.4e-56 224.2 224 55.8
ClCG02G022720 Citrullus lanatus HOM05D002956 ORTHO05D009000 1.2e-55 221.1 300 49.3
Nn7g36832 Nelumbo nucifera HOM05D002956 ORTHO05D009000 2.5e-53 213.4 288 48.6
Zm00001eb128680 Zea mays HOM05D002956 ORTHO05D009000 5.5e-53 212.2 202 56.9
Os01g0268900 Oryza sativa ssp. japonica HOM05D002956 ORTHO05D009000 7.9e-52 208.4 202 55.9
Duzib168G2273 Durio zibethinus HOM05D002956 ORTHO05D009000 1.8e-51 207.2 166 62.7
COL.COLO4_07383 Corchorus olitorius HOM05D002956 ORTHO05D009000 2.8e-49 199.9 276 46.0
SMO367G0391 Selaginella moellendorffii HOM05D002956 ORTHO05D009000 1.8e-48 197.2 209 50.7
Mapoly0206s0003 Marchantia polymorpha HOM05D002956 ORTHO05D009000 7.0e-48 195.3 198 49.0
Pp3c23_20070 Physcomitrium patens HOM05D002956 ORTHO05D009000 2.5e-45 186.8 220 45.9
CBR_g32285 Chara braunii HOM05D002956 ORTHO05D009000 3.0e-43 179.9 161 51.6
CiPaw.14G111100 Carya illinoinensis HOM05D002956 ORTHO05D009000 6.7e-43 178.7 210 51.0
AL5G21910 Arabidopsis lyrata HOM05D002956 ORTHO05D009000 4.7e-36 156.0 196 42.9
Nitab4.5_0006687g0020 Nicotiana tabacum HOM05D002956 ORTHO05D009000 1.1e-32 144.8 89 75.3
CiPaw.13G148600 Carya illinoinensis HOM05D002956 ORTHO05D009000 1.4e-32 144.4 290 37.6
Prupe.4G260500 Prunus persica HOM05D002956 ORTHO05D009000 2.9e-30 136.7 115 62.6
Nitab4.5_0006687g0010 Nicotiana tabacum HOM05D002956 ORTHO05D000001 1.0e-27 128.3 196 40.8
AagrBONN_evm.TU.Sc2ySwM_228.3484 Anthoceros agrestis HOM05D002956 ORTHO05D009000 2.3e-27 127.1 130 50.8
MCO16G644 Micromonas commoda HOM05D002956 ORTHO05D009000 3.7e-25 119.8 160 42.5
AT3G43910 Arabidopsis thaliana HOM05D002956 ORTHO05D009000 1.1e-24 118.2 168 41.7
Psat5g240480 Pisum sativum HOM05D002956 ORTHO05D009000 2.0e-23 114.0 193 39.9
Sed0027603 Sechium edule HOM05D002956 ORTHO05D009000 1.9e-21 107.5 176 43.8
CARHR119020 Cardamine hirsuta HOM05D002956 ORTHO05D009000 1.8e-19 100.9 166 42.8
CARHR035860 Cardamine hirsuta HOM05D002956 ORTHO05D009000 2.5e-13 80.5 99 43.4
Cre04.g218000 Chlamydomonas reinhardtii HOM05D002956 ORTHO05D009000 6.8e-11 72.4 108 37.0
vmacro04046 Vaccinium macrocarpon HOM05D002956 ORTHO05D009000 6.8e-11 72.4 138 36.2
PRCOL_00003518 Prasinoderma coloniale HOM05D002956 ORTHO05D009000 4.4e-10 69.7 69 50.7
CARHR035850 Cardamine hirsuta HOM05D002956 ORTHO05D009000 1.3e-09 68.2 91 48.4
Oeu027210.1 Olea europaea HOM05D002956 ORTHO05D009000 6.0e-07 59.3 77 46.8
Psat5g184640 Pisum sativum HOM05D002956 ORTHO05D009000 7.8e-07 58.9 75 44.0


User provided reference genes

Program Settings