Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.02G119400 Manihot esculenta HOM05D005476 ORTHO05D006886 7.6e-211 736.9 364 100.0
Manes.01G161600 Manihot esculenta HOM05D005476 ORTHO05D006886 7.0e-180 634.0 366 85.5
Potri.009G046200 Populus trichocarpa HOM05D005476 ORTHO05D006886 4.0e-151 538.5 381 71.4
Potri.001G251500 Populus trichocarpa HOM05D005476 ORTHO05D006886 3.6e-144 515.4 337 73.3
Sabra09G0033300 Salix brachista HOM05D005476 ORTHO05D006886 8.9e-143 510.8 381 69.0
Ciclev10028681m.g Citrus clementina HOM05D005476 ORTHO05D006886 1.8e-135 486.5 366 66.4
Dinv14437 Davidia involucrata HOM05D005476 ORTHO05D006886 8.3e-133 477.6 384 62.8
CiPaw.13G077600 Carya illinoinensis HOM05D005476 ORTHO05D006886 2.7e-131 472.6 324 70.1
CiPaw.14G059600 Carya illinoinensis HOM05D005476 ORTHO05D006886 6.0e-131 471.5 339 68.7
Thecc.09G301800 Theobroma cacao HOM05D005476 ORTHO05D006886 7.8e-131 471.1 385 62.1
Haze_24322 Corylus avellana HOM05D005476 ORTHO05D006886 3.0e-130 469.2 326 69.3
TWI31G0160 Tripterygium wilfordii HOM05D005476 ORTHO05D006886 3.0e-130 469.2 330 69.7
Cfa011695 Carpinus fangiana HOM05D005476 ORTHO05D006886 5.1e-130 468.4 326 69.0
Cpa.g.sc415.4 Carica papaya HOM05D005476 ORTHO05D006886 4.3e-129 465.3 371 65.0
Dinv28640 Davidia involucrata HOM05D005476 ORTHO05D006886 5.6e-129 464.9 380 63.4
Atru.chr3.4220 Acer truncatum HOM05D005476 ORTHO05D006886 7.3e-129 464.5 371 64.2
TWI79G0899 Tripterygium wilfordii HOM05D005476 ORTHO05D006886 1.6e-128 463.4 374 63.1
COL.COLO4_19157 Corchorus olitorius HOM05D005476 ORTHO05D006886 2.3e-127 459.5 340 65.9
FAN21G0574 Fragaria x ananassa HOM05D005476 ORTHO05D006886 2.3e-127 459.5 384 59.6
Duzib168G1303 Durio zibethinus HOM05D005476 ORTHO05D006886 4.0e-127 458.8 341 66.6
FAN16G3667 Fragaria x ananassa HOM05D005476 ORTHO05D006886 2.6e-126 456.1 384 59.4
FvH4_3g38550 Fragaria vesca HOM05D005476 ORTHO05D006886 3.7e-125 452.2 384 59.4
Gorai.006G106700 Gossypium raimondii HOM05D005476 ORTHO05D006886 1.4e-124 450.3 334 65.6
Prupe.6G057500 Prunus persica HOM05D005476 ORTHO05D006886 1.4e-124 450.3 376 60.4
FAN11G1091 Fragaria x ananassa HOM05D005476 ORTHO05D006886 1.9e-124 449.9 384 59.1
Duzib170G1024 Durio zibethinus HOM05D005476 ORTHO05D006886 3.2e-124 449.1 340 65.9
Eucgr.B02253 Eucalyptus grandis HOM05D005476 ORTHO05D006886 3.5e-123 445.7 334 66.2
MD11G1074700 Malus domestica HOM05D005476 ORTHO05D006886 6.0e-123 444.9 329 66.0
THA.LOC104810712 Tarenaya hassleriana HOM05D005476 ORTHO05D006886 1.7e-122 443.4 335 65.1
CSS0011477 Camellia sinensis var. sinensis HOM05D005476 ORTHO05D006886 8.6e-122 441.0 370 61.1
RcHm_v2.0_Chr5g0069451 Rosa chinensis HOM05D005476 ORTHO05D006886 1.9e-121 439.9 335 63.6
QL01p038276 Quercus lobata HOM05D005476 ORTHO05D006886 4.3e-121 438.7 325 67.4
CSS0028478 Camellia sinensis var. sinensis HOM05D005476 ORTHO05D006886 1.2e-120 437.2 370 60.3
FAN25G3001 Fragaria x ananassa HOM05D005476 ORTHO05D006886 2.1e-120 436.4 410 55.4
TAR636G1181 Trochodendron aralioides HOM05D005476 ORTHO05D006886 3.6e-120 435.6 386 57.8
Cc01_g14180 Coffea canephora HOM05D005476 ORTHO05D006886 6.2e-120 434.9 323 65.6
DCAR_007375 Daucus carota HOM05D005476 ORTHO05D006886 6.2e-120 434.9 372 59.7
MD03G1070700 Malus domestica HOM05D005476 ORTHO05D006886 1.1e-119 434.1 329 65.0
CANSAT25G3760 Cannabis sativa HOM05D005476 ORTHO05D006886 8.9e-119 431.0 358 59.5
CAN.G394.127 Capsicum annuum HOM05D005476 ORTHO05D006886 5.8e-118 428.3 371 60.9
Nitab4.5_0001806g0030 Nicotiana tabacum HOM05D005476 ORTHO05D006886 9.9e-118 427.6 370 60.8
Solyc06g076950.3 Solanum lycopersicum HOM05D005476 ORTHO05D006886 9.9e-118 427.6 381 58.5
Sopen06g033350 Solanum pennellii HOM05D005476 ORTHO05D006886 9.9e-118 427.6 381 58.3
PGSC0003DMG400030356 Solanum tuberosum HOM05D005476 ORTHO05D006886 9.9e-118 427.6 381 58.8
TAR633G0563 Trochodendron aralioides HOM05D005476 ORTHO05D006886 9.9e-118 427.6 369 60.4
AT5G58730 Arabidopsis thaliana HOM05D005476 ORTHO05D006886 4.9e-117 425.2 326 63.8
Aa31LG11G490 Aethionema arabicum HOM05D005476 ORTHO05D006886 8.4e-117 424.5 321 65.1
Sp6g20420 Schrenkiella parvula HOM05D005476 ORTHO05D006886 1.1e-116 424.1 321 64.8
Nitab4.5_0000010g0290 Nicotiana tabacum HOM05D005476 ORTHO05D006886 1.9e-116 423.3 329 64.4
Carub.0008s1935 Capsella rubella HOM05D005476 ORTHO05D006886 3.2e-116 422.5 324 65.4
CARHR272640 Cardamine hirsuta HOM05D005476 ORTHO05D006886 9.2e-116 421.0 343 61.8
Thhalv10014005m.g Eutrema salsugineum HOM05D005476 ORTHO05D006886 1.2e-115 420.6 322 65.5
AL8G35010 Arabidopsis lyrata HOM05D005476 ORTHO05D006886 1.6e-115 420.2 321 64.2
Peaxi162Scf00540g00426 Petunia axillaris HOM05D005476 ORTHO05D006886 3.5e-115 419.1 378 59.0
AUR62001646 Chenopodium quinoa HOM05D005476 ORTHO05D006886 4.6e-115 418.7 379 58.8
GSVIVG01024740001 Vitis vinifera HOM05D005476 ORTHO05D006886 6.6e-114 414.8 366 59.6
Aqoxy2G00901 Aquilegia oxysepala HOM05D005476 ORTHO05D006886 8.7e-114 414.5 327 63.3
Lsat_1_v5_gn_9_20101 Lactuca sativa HOM05D005476 ORTHO05D006886 1.1e-113 414.1 323 65.6
MELO3C020550.2 Cucumis melo HOM05D005476 ORTHO05D006886 2.5e-113 412.9 341 59.8
AUR62020130 Chenopodium quinoa HOM05D005476 ORTHO05D006886 3.3e-113 412.5 375 58.9
A10p15540 Brassica napus HOM05D005476 ORTHO05D006886 9.6e-113 411.0 322 63.0
ClCG03G000760 Citrullus lanatus HOM05D005476 ORTHO05D006886 1.6e-112 410.2 354 58.8
Nn2g13708 Nelumbo nucifera HOM05D005476 ORTHO05D006886 1.6e-112 410.2 341 59.8
EL10Ac7g16167 Beta vulgaris HOM05D005476 ORTHO05D006886 2.8e-112 409.5 385 57.4
HanXRQChr04g0109161 Helianthus annuus HOM05D005476 ORTHO05D006886 2.8e-112 409.5 323 65.3
BraA10t43679Z Brassica rapa HOM05D005476 ORTHO05D006886 4.8e-112 408.7 326 62.6
SGA_v2.0_scaffold146G36140 Striga asiatica HOM05D005476 ORTHO05D006886 1.8e-111 406.8 328 61.6
Hund18848 Selenicereus undatus HOM05D005476 ORTHO05D006886 2.4e-111 406.4 330 63.0
Sed0016907 Sechium edule HOM05D005476 ORTHO05D006886 4.4e-110 402.1 354 57.6
Gohir.A09G090300 Gossypium hirsutum HOM05D005476 ORTHO05D006886 7.6e-110 401.4 288 68.1
C09p50810 Brassica napus HOM05D005476 ORTHO05D006886 9.9e-110 401.0 319 62.7
Gohir.D09G090400 Gossypium hirsutum HOM05D005476 ORTHO05D006886 1.7e-109 400.2 288 68.1
SGA_v2.0_scaffold120G32912 Striga asiatica HOM05D005476 ORTHO05D006886 2.2e-109 399.8 316 61.7
BolC9t57941H Brassica oleracea HOM05D005476 ORTHO05D006886 3.8e-109 399.1 319 62.7
Sed0014418 Sechium edule HOM05D005476 ORTHO05D006886 8.4e-109 397.9 354 56.8
Ah.08g221180 Amaranthus hybridus HOM05D005476 ORTHO05D006886 7.1e-108 394.8 332 60.2
SHI19142 Sapria himalayana HOM05D005476 ORTHO05D006886 4.6e-107 392.1 340 57.9
PSO801G0319 Papaver somniferum HOM05D005476 ORTHO05D006886 1.3e-106 390.6 301 65.4
vmacro02961 Vaccinium macrocarpon HOM05D005476 ORTHO05D006886 6.6e-106 388.3 430 49.5
SalBow2G2575 Salvia bowleyana HOM05D005476 ORTHO05D006886 1.1e-105 387.5 324 59.9
LjContig00155g0002690 Lotus japonicus HOM05D005476 ORTHO05D006886 3.3e-105 386.0 328 58.2
BcaC04g19834 Brassica carinata HOM05D005476 ORTHO05D006886 4.3e-105 385.6 319 61.4
PSO339G1712 Papaver somniferum HOM05D005476 ORTHO05D006886 2.1e-104 383.3 301 64.1
Migut.N00789 Erythranthe guttata HOM05D005476 ORTHO05D006886 4.8e-104 382.1 360 55.8
Sc06g0008450 Simmondsia chinensis HOM05D005476 ORTHO05D006886 4.8e-104 382.1 369 55.6
ECA247G2000 Erigeron canadensis HOM05D005476 ORTHO05D006886 1.4e-103 380.6 368 54.3
unitig_8.g3687 Utricularia gibba HOM05D005476 ORTHO05D006886 1.8e-103 380.2 324 57.4
SalBow5G1841 Salvia bowleyana HOM05D005476 ORTHO05D006886 2.6e-102 376.3 315 60.6
Lalb_Chr17g0345081 Lupinus albus HOM05D005476 ORTHO05D006886 5.8e-102 375.2 334 56.9
Nn2g11493 Nelumbo nucifera HOM05D005476 ORTHO05D006886 7.6e-102 374.8 285 63.9
Rhsim13G0069500 Rhododendron simsii HOM05D005476 ORTHO05D006886 1.7e-101 373.6 355 56.1
arahy.Tifrunner.gnm1.ann1.Q06W8H Arachis hypogaea HOM05D005476 ORTHO05D006886 6.4e-101 371.7 337 56.7
Glyma.14G193500 Glycine max HOM05D005476 ORTHO05D006886 1.9e-100 370.2 332 55.4
Ca_05598_v3 Cicer arietinum L. HOM05D005476 ORTHO05D006886 3.5e-99 365.9 331 56.5
PGR102G2402 Punica granatum HOM05D005476 ORTHO05D006886 3.5e-99 365.9 275 66.9
MBI14_g42907_MAGBIO Magnolia biondii HOM05D005476 ORTHO05D006886 1.8e-98 363.6 350 53.1
TPR.G5779 Trifolium pratense HOM05D005476 ORTHO05D006886 5.1e-98 362.1 331 54.4
Phvul.008G261400 Phaseolus vulgaris HOM05D005476 ORTHO05D006886 1.5e-97 360.5 339 54.9
CDE04G1962 Ceratophyllum demersum HOM05D005476 ORTHO05D006886 7.4e-97 358.2 296 57.8
Glyma.02G226600 Glycine max HOM05D005476 ORTHO05D006886 7.4e-97 358.2 331 54.4
Psat2g058600 Pisum sativum HOM05D005476 ORTHO05D006886 1.6e-96 357.1 331 54.4
unitig_22.g5210 Utricularia gibba HOM05D005476 ORTHO05D006886 1.4e-95 354.0 325 56.6
CsaV3_1G036180 Cucumis sativus L. HOM05D005476 ORTHO05D006886 2.6e-94 349.7 288 60.1
Medtr5g070350 Medicago truncatula HOM05D005476 ORTHO05D006886 4.5e-94 349.0 332 53.3
SalBow8G4850 Salvia bowleyana HOM05D005476 ORTHO05D006886 4.9e-93 345.5 337 54.3
HPP92_002247 Vanilla planifolia HOM05D005476 ORTHO05D006886 1.0e-90 337.8 344 51.2
ATR0618G050 Amborella trichopoda HOM05D005476 ORTHO05D006886 3.0e-90 336.3 324 52.8
VMungo0647G0678 Vigna mungo HOM05D005476 ORTHO05D006886 2.9e-85 319.7 288 56.9
Oeu013433.3 Olea europaea HOM05D005476 ORTHO05D006886 1.2e-83 314.3 272 59.2
CDE02G0680 Ceratophyllum demersum HOM05D005476 ORTHO05D006886 2.3e-82 310.1 283 52.7
Lj1A137G45 Lonicera japonica HOM05D005476 ORTHO05D006886 3.0e-82 309.7 335 51.9
Os03g0737701 Oryza sativa ssp. japonica HOM05D005476 ORTHO05D006886 9.7e-81 304.7 327 48.6
Zm00001eb056490 Zea mays HOM05D005476 ORTHO05D006886 1.4e-76 290.8 288 52.1
Oeu000377.2 Olea europaea HOM05D005476 ORTHO05D006886 9.1e-71 271.6 262 55.3
AL1010U10010 Arabidopsis lyrata HOM05D005476 ORTHO05D006886 2.0e-70 270.4 193 68.4
Pp3c1_3930 Physcomitrium patens HOM05D005476 ORTHO05D006886 1.7e-64 250.8 297 42.8
Mapoly0060s0007 Marchantia polymorpha HOM05D005476 ORTHO05D006886 1.8e-63 247.3 279 46.2
arahy.Tifrunner.gnm1.ann1.70CJD0 Arachis hypogaea HOM05D005476 ORTHO05D006886 1.1e-60 238.0 199 58.8
SEGI_26423 Sequoiadendron giganteum HOM05D005476 ORTHO05D006886 1.2e-59 234.6 289 44.6
SMO329G0019 Selaginella moellendorffii HOM05D005476 ORTHO05D006886 1.8e-58 230.7 270 44.1
Pp3c7_18020 Physcomitrium patens HOM05D005476 ORTHO05D006886 3.9e-58 229.6 286 41.6
AagrBONN_evm.TU.Sc2ySwM_362.363 Anthoceros agrestis HOM05D005476 ORTHO05D006886 8.8e-58 228.4 294 43.5
CBR_g23861 Chara braunii HOM05D005476 ORTHO05D006886 1.6e-54 217.6 289 40.1
Gohir.D05G089750 Gossypium hirsutum HOM05D005476 ORTHO05D006886 3.4e-49 199.9 164 62.8
A03p12050 Brassica napus HOM05D005476 ORTHO05D006886 1.1e-44 184.9 175 58.9
RcHm_v2.0_Chr6g0276161 Rosa chinensis HOM05D005476 ORTHO05D006886 4.7e-35 152.9 135 54.8
RcHm_v2.0_Chr7g0201761 Rosa chinensis HOM05D005476 ORTHO05D006886 3.0e-34 150.2 129 56.6
HanXRQChr16g0507541 Helianthus annuus HOM05D005476 ORTHO05D006886 5.4e-31 139.4 92 71.7
BraA03t10517Z Brassica rapa HOM05D005476 ORTHO05D006886 4.1e-23 113.2 106 60.4
C03p15890 Brassica napus HOM05D000062 ORTHO05D021669 4.7e-19 99.8 119 51.3
BolC3t14020H Brassica oleracea HOM05D000062 ORTHO05D006886 4.7e-19 99.8 119 51.3
SalBow8G2493 Salvia bowleyana HOM05D005476 ORTHO05D006886 2.3e-18 97.4 172 38.4
RcHm_v2.0_Chr7g0242751 Rosa chinensis HOM05D005476 ORTHO05D006886 5.2e-18 96.3 83 59.0
Actinidia23243 Actinidia chinensis HOM05D005476 ORTHO05D006886 1.2e-17 95.1 74 68.9
arahy.Tifrunner.gnm1.ann1.Y3WSKM Arachis hypogaea HOM05D005476 ORTHO05D006886 7.1e-15 85.9 85 51.8
SalBow5G5594 Salvia bowleyana HOM05D005476 ORTHO05D006886 1.8e-10 71.2 71 52.1
Pp3c11_9540 Physcomitrium patens HOM05D005476 ORTHO05D006886 8.9e-10 68.9 116 32.8
RcHm_v2.0_Chr6g0303391 Rosa chinensis HOM05D005476 ORTHO05D006886 9.2e-07 58.9 54 53.7
BolC4t22609H Brassica oleracea HOM05D005476 ORTHO05D032808 2.1e-06 57.8 52 53.8
Mapoly0043s0096 Marchantia polymorpha HOM05D000559 ORTHO05D000596 2.7e-06 57.4 140 30.0
HanXRQChr05g0151741 Helianthus annuus HOM05D004293 ORTHO05D005044 4.6e-06 56.6 118 33.9
CARHR169860 Cardamine hirsuta HOM05D000559 ORTHO05D000596 6.0e-06 56.2 100 36.0
BcaC02g11914 Brassica carinata HOM05D005476 ORTHO05D032808 7.8e-06 55.8 52 51.9
Hma1.2p1_0050F.1_g029200 Hydrangea macrophylla HOM05D000559 ORTHO05D000596 7.8e-06 55.8 111 31.5


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