Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.02G109300 Manihot esculenta HOM05D006610 ORTHO05D008447 2.1e-115 419.1 217 100.0
Sabra05G0089400 Salix brachista HOM05D006610 ORTHO05D008447 7.8e-86 320.9 224 76.8
CSS0043605 Camellia sinensis var. sinensis HOM05D006610 ORTHO05D008447 1.0e-85 320.5 217 79.7
TAR186G0001 Trochodendron aralioides HOM05D006610 ORTHO05D008447 8.0e-83 310.8 217 77.0
Gohir.D03G006400 Gossypium hirsutum HOM05D006610 ORTHO05D008447 1.0e-82 310.5 221 73.8
Atru.chr3.883 Acer truncatum HOM05D006610 ORTHO05D008447 5.2e-82 308.1 217 75.1
Atru.chr3.894 Acer truncatum HOM05D006610 ORTHO05D008447 5.2e-82 308.1 217 75.1
Haze_03713 Corylus avellana HOM05D006610 ORTHO05D008447 5.2e-82 308.1 217 76.5
Gorai.003G006700 Gossypium raimondii HOM05D006610 ORTHO05D008447 6.8e-82 307.8 221 73.8
COL.COLO4_22482 Corchorus olitorius HOM05D006610 ORTHO05D008447 8.9e-82 307.4 219 76.7
Duzib187G1817 Durio zibethinus HOM05D006610 ORTHO05D008447 2.0e-81 306.2 218 78.0
Gohir.A02G173500 Gossypium hirsutum HOM05D006610 ORTHO05D008447 2.2e-80 302.8 217 74.7
TWI09G0665 Tripterygium wilfordii HOM05D006610 ORTHO05D008447 8.3e-80 300.8 217 74.2
GSVIVG01007223001 Vitis vinifera HOM05D006610 ORTHO05D008447 8.3e-80 300.8 218 74.3
Potri.005G109100 Populus trichocarpa HOM05D006610 ORTHO05D008447 1.1e-79 300.4 222 73.9
Hma1.2p1_0315F.1_g122440 Hydrangea macrophylla HOM05D006610 ORTHO05D008447 7.0e-79 297.7 218 73.9
Cpa.g.sc6.302 Carica papaya HOM05D006610 ORTHO05D008447 9.2e-79 297.4 217 74.2
Ciclev10026475m.g Citrus clementina HOM05D006610 ORTHO05D008447 2.3e-77 292.7 221 71.9
Rhsim08G0031200 Rhododendron simsii HOM05D006610 ORTHO05D008447 6.6e-77 291.2 238 68.1
Actinidia28724 Actinidia chinensis HOM05D006610 ORTHO05D008447 1.1e-76 290.4 217 71.0
Cfa007018 Carpinus fangiana HOM05D006610 ORTHO05D008447 3.3e-76 288.9 239 67.8
Nitab4.5_0008552g0010 Nicotiana tabacum HOM05D006610 ORTHO05D008447 7.3e-76 287.7 219 70.8
VMungo0251G0375 Vigna mungo HOM05D006610 ORTHO05D008447 7.3e-76 287.7 221 70.1
arahy.Tifrunner.gnm1.ann1.UN150X Arachis hypogaea HOM05D006610 ORTHO05D008447 9.5e-76 287.3 217 70.0
Phvul.003G266300 Phaseolus vulgaris HOM05D006610 ORTHO05D008447 1.6e-75 286.6 217 70.5
CSS0036095 Camellia sinensis var. sinensis HOM05D006610 ORTHO05D008447 4.7e-75 285.0 217 72.8
Nitab4.5_0001789g0060 Nicotiana tabacum HOM05D006610 ORTHO05D008447 4.7e-75 285.0 227 67.0
Prupe.7G173500 Prunus persica HOM05D006610 ORTHO05D008447 4.7e-75 285.0 225 69.8
Cc07_g11190 Coffea canephora HOM05D006610 ORTHO05D008447 8.1e-75 284.3 219 71.7
PGR119G0279 Punica granatum HOM05D006610 ORTHO05D008447 1.8e-74 283.1 235 68.1
CANSAT01G0612 Cannabis sativa HOM05D006610 ORTHO05D008447 4.4e-73 278.5 219 70.3
RcHm_v2.0_Chr2g0098651 Rosa chinensis HOM05D006610 ORTHO05D008447 5.8e-73 278.1 222 71.2
Glyma.16G123000 Glycine max HOM05D006610 ORTHO05D008447 7.5e-73 277.7 218 68.3
arahy.Tifrunner.gnm1.ann1.M7YZEH Arachis hypogaea HOM05D006610 ORTHO05D008447 1.3e-72 276.9 231 65.4
MD02G1124800 Malus domestica HOM05D006610 ORTHO05D008447 1.7e-72 276.6 226 68.6
PGSC0003DMG400003653 Solanum tuberosum HOM05D006610 ORTHO05D008447 1.7e-72 276.6 218 69.7
vmacro18433 Vaccinium macrocarpon HOM05D006610 ORTHO05D008447 1.7e-72 276.6 150 92.0
CAN.G890.6 Capsicum annuum HOM05D006610 ORTHO05D008447 2.2e-72 276.2 220 66.8
Sopen02g028290 Solanum pennellii HOM05D006610 ORTHO05D008447 3.7e-72 275.4 218 68.3
AUR62003705 Chenopodium quinoa HOM05D006610 ORTHO05D008447 4.9e-72 275.0 155 88.4
ECA246G3062 Erigeron canadensis HOM05D006610 ORTHO05D008447 4.9e-72 275.0 217 67.3
AUR62018012 Chenopodium quinoa HOM05D006610 ORTHO05D008447 1.1e-71 273.9 216 68.1
DCAR_014043 Daucus carota HOM05D006610 ORTHO05D008447 1.4e-71 273.5 222 65.3
FAN28G2812 Fragaria x ananassa HOM05D006610 ORTHO05D008447 1.9e-71 273.1 220 70.5
HanXRQChr16g0531751 Helianthus annuus HOM05D006610 ORTHO05D008447 1.6e-70 270.0 177 78.0
Solyc02g083500.3 Solanum lycopersicum HOM05D006610 ORTHO05D008447 2.7e-70 269.2 218 67.9
CsaV3_3G000580 Cucumis sativus L. HOM05D006610 ORTHO05D008447 3.5e-70 268.9 217 68.2
FAN19G1298 Fragaria x ananassa HOM05D006610 ORTHO05D008447 3.5e-70 268.9 227 67.8
Hund16514 Selenicereus undatus HOM05D006610 ORTHO05D008447 3.5e-70 268.9 217 68.7
Lj4A224G29 Lonicera japonica HOM05D006610 ORTHO05D008447 6.0e-70 268.1 150 88.7
Sed0015497 Sechium edule HOM05D006610 ORTHO05D008447 1.3e-69 266.9 219 67.1
EL10Ac6g15167 Beta vulgaris HOM05D006610 ORTHO05D008447 3.0e-69 265.8 210 71.0
Eucgr.I02316 Eucalyptus grandis HOM05D006610 ORTHO05D008447 3.0e-69 265.8 224 66.5
Lj4g0021807 Lotus japonicus HOM05D006610 ORTHO05D008447 1.5e-68 263.5 219 65.8
THA.LOC104819168 Tarenaya hassleriana HOM05D006610 ORTHO05D008447 1.9e-68 263.1 218 66.5
MELO3C013747.2 Cucumis melo HOM05D006610 ORTHO05D008447 4.3e-68 261.9 217 67.7
CDE09G0967 Ceratophyllum demersum HOM05D006610 ORTHO05D008447 1.6e-67 260.0 183 75.4
Peaxi162Scf00328g00315 Petunia axillaris HOM05D006610 ORTHO05D008447 1.6e-67 260.0 150 85.3
Aqoxy6G02108 Aquilegia oxysepala HOM05D006610 ORTHO05D008447 8.1e-67 257.7 155 82.6
TPR.G19505 Trifolium pratense HOM05D006610 ORTHO05D008447 1.1e-66 257.3 149 83.9
Lalb_Chr16g0391471 Lupinus albus HOM05D006610 ORTHO05D008447 2.3e-66 256.1 218 65.6
THA.LOC104821342 Tarenaya hassleriana HOM05D006610 ORTHO05D008447 2.3e-66 256.1 217 66.8
MSTRG.15312 Avicennia marina HOM05D006610 ORTHO05D008447 4.0e-66 255.4 197 66.5
Psat4g102280 Pisum sativum HOM05D006610 ORTHO05D008447 1.2e-65 253.8 217 64.5
Duzib147G1005 Durio zibethinus HOM05D006610 ORTHO05D008447 3.4e-65 252.3 218 67.9
AUR62034480 Chenopodium quinoa HOM05D006610 ORTHO05D008447 7.6e-65 251.1 136 91.2
Medtr8g075110 Medicago truncatula HOM05D006610 ORTHO05D008447 1.3e-64 250.4 219 62.6
FAN23G0795 Fragaria x ananassa HOM05D006610 ORTHO05D008447 2.2e-64 249.6 213 67.6
ATR0180G027 Amborella trichopoda HOM05D006610 ORTHO05D008447 2.9e-64 249.2 152 81.6
CDE02G2830 Ceratophyllum demersum HOM05D006610 ORTHO05D008447 2.9e-64 249.2 195 68.7
Migut.H00253 Erythranthe guttata HOM05D006610 ORTHO05D008447 4.9e-64 248.4 156 78.8
Gohir.D11G179450 Gossypium hirsutum HOM05D006610 ORTHO05D008447 1.9e-63 246.5 151 84.1
Nn6g31943 Nelumbo nucifera HOM05D006610 ORTHO05D008447 3.2e-63 245.7 217 64.1
FAN26G1933 Fragaria x ananassa HOM05D006610 ORTHO05D008447 4.1e-63 245.4 221 66.1
Gorai.007G191500 Gossypium raimondii HOM05D006610 ORTHO05D008447 5.4e-63 245.0 215 67.9
SGA_v2.0_scaffold49G18127 Striga asiatica HOM05D006610 ORTHO05D008447 2.7e-62 242.7 220 62.3
Os09g0541700 Oryza sativa ssp. japonica HOM05D006610 ORTHO05D008447 4.6e-62 241.9 192 68.8
PSO170G5432 Papaver somniferum HOM05D006610 ORTHO05D008447 2.3e-61 239.6 153 78.4
Sp2g30600 Schrenkiella parvula HOM05D006610 ORTHO05D008447 6.6e-61 238.0 218 61.9
SalBow3G0548 Salvia bowleyana HOM05D006610 ORTHO05D008447 8.6e-61 237.7 217 61.8
SalBow3G0370 Salvia bowleyana HOM05D006610 ORTHO05D008447 1.1e-60 237.3 198 64.6
AUR62018013 Chenopodium quinoa HOM05D006610 ORTHO05D008447 6.2e-59 231.5 216 59.3
AL8G45500 Arabidopsis lyrata HOM05D006610 ORTHO05D008447 4.0e-58 228.8 217 60.4
Carub.0008s2842 Capsella rubella HOM05D006610 ORTHO05D008447 1.2e-57 227.3 208 60.6
A02p44620 Brassica napus HOM05D006610 ORTHO05D008447 2.6e-57 226.1 206 60.7
BraA02t09378Z Brassica rapa HOM05D006610 ORTHO05D008447 2.6e-57 226.1 206 60.7
Thhalv10004913m.g Eutrema salsugineum HOM05D006610 ORTHO05D008447 2.6e-57 226.1 219 58.4
Lsat_1_v5_gn_3_71540 Lactuca sativa HOM05D006610 ORTHO05D008447 4.4e-57 225.3 198 65.7
MBI05_g19586_MAGBIO Magnolia biondii HOM05D006610 ORTHO05D008447 5.8e-57 224.9 128 85.2
ClCG10G000510 Citrullus lanatus HOM05D006610 ORTHO05D008447 7.6e-57 224.6 229 58.1
AT5G66090 Arabidopsis thaliana HOM05D006610 ORTHO05D008447 2.2e-56 223.0 221 59.3
BolC2t12560H Brassica oleracea HOM05D006610 ORTHO05D008447 4.9e-56 221.9 210 60.0
CARHR281660 Cardamine hirsuta HOM05D006610 ORTHO05D008447 2.7e-54 216.1 224 57.6
AagrBONN_evm.TU.Sc2ySwM_369.589 Anthoceros agrestis HOM05D006610 ORTHO05D008447 4.6e-54 215.3 151 70.2
unitig_736.g22562 Utricularia gibba HOM05D006610 ORTHO05D008447 1.0e-53 214.2 215 56.7
SEGI_37776 Sequoiadendron giganteum HOM05D006610 ORTHO05D008447 5.1e-53 211.8 200 55.5
Aa31LG1G14570 Aethionema arabicum HOM05D006610 ORTHO05D008447 1.1e-52 210.7 237 55.7
Pp3c9_6630 Physcomitrium patens HOM05D006610 ORTHO05D008447 1.1e-52 210.7 156 64.7
QL06p051388 Quercus lobata HOM05D006610 ORTHO05D008447 1.1e-50 204.1 109 93.6
Oeu000676.1 Olea europaea HOM05D006610 ORTHO05D008447 3.8e-48 195.7 108 88.9
SMO361G0750 Selaginella moellendorffii HOM05D004797 ORTHO05D005752 1.0e-45 187.6 148 61.5
Thecc.01G013000 Theobroma cacao HOM05D006610 ORTHO05D008447 3.3e-44 182.6 152 67.8
Hma1.2p1_3766F.1_g337520 Hydrangea macrophylla HOM05D006610 ORTHO05D008447 7.4e-44 181.4 110 83.6
Lsat_1_v5_gn_2_20941 Lactuca sativa HOM05D006610 ORTHO05D008447 7.4e-44 181.4 176 59.1
Gohir.A11G172600 Gossypium hirsutum HOM05D006610 ORTHO05D008447 4.5e-41 172.2 156 64.7
Nn5g30811 Nelumbo nucifera HOM05D006610 ORTHO05D008447 6.4e-40 168.3 159 64.2
Sc03g0003740 Simmondsia chinensis HOM05D006610 ORTHO05D008447 4.2e-39 165.6 152 59.9
FvH4_1g11240 Fragaria vesca HOM05D006610 ORTHO05D008447 2.5e-36 156.4 169 56.2
HPP92_025898 Vanilla planifolia HOM05D006610 ORTHO05D008447 9.6e-36 154.5 121 63.6
Dinv08559 Davidia involucrata HOM05D006610 ORTHO05D008447 2.2e-32 143.3 72 97.2
Cre15.g638400 Chlamydomonas reinhardtii HOM05D006610 ORTHO05D008447 7.4e-28 128.3 177 39.0
BcaC07g37739 Brassica carinata HOM05D006610 ORTHO05D008447 1.2e-22 110.9 68 79.4
BolC8t48119H Brassica oleracea HOM05D006610 ORTHO05D008447 1.2e-22 110.9 68 79.4
QL06p051391 Quercus lobata HOM05D006610 ORTHO05D008447 1.2e-22 110.9 107 58.9
vmacro18432 Vaccinium macrocarpon HOM05D006610 ORTHO05D008447 1.3e-16 90.9 58 72.4
Solyc02g083525.1 Solanum lycopersicum HOM05D006610 ORTHO05D008447 2.7e-14 83.2 52 76.9
HPP92_025903 Vanilla planifolia HOM05D006610 ORTHO05D008447 3.2e-07 59.7 36 75.0


User provided reference genes

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