Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.02G104200 Manihot esculenta HOM05D008224 ORTHO05D010083 1.4e-54 216.1 109 100.0
Potri.005G114500 Populus trichocarpa HOM05D008224 ORTHO05D010083 4.2e-24 114.8 112 62.5
Sabra05G0093700 Salix brachista HOM05D008224 ORTHO05D010083 2.1e-23 112.5 108 63.9
CiPaw.08G131800 Carya illinoinensis HOM05D008224 ORTHO05D010083 1.2e-21 106.7 107 62.6
COL.COLO4_21914 Corchorus olitorius HOM05D008224 ORTHO05D010083 1.5e-21 106.3 90 64.4
Phvul.002G109500 Phaseolus vulgaris HOM05D008224 ORTHO05D010083 8.3e-20 100.5 83 68.7
Solyc02g083930.1 Solanum lycopersicum HOM05D008224 ORTHO05D010083 1.1e-19 100.1 92 56.5
CSS0002084 Camellia sinensis var. sinensis HOM05D008224 ORTHO05D010083 1.8e-19 99.4 121 48.8
PGSC0003DMG400003638 Solanum tuberosum HOM05D008224 ORTHO05D010083 3.1e-19 98.6 92 56.5
Thecc.01G019300 Theobroma cacao HOM05D008224 ORTHO05D010083 3.1e-19 98.6 96 60.4
Prupe.7G167900 Prunus persica HOM05D008224 ORTHO05D010083 4.1e-19 98.2 99 55.6
Sopen02g028710 Solanum pennellii HOM05D008224 ORTHO05D010083 4.1e-19 98.2 92 55.4
TAR625G0799 Trochodendron aralioides HOM05D008224 ORTHO05D010083 5.4e-19 97.8 93 59.1
Gohir.D11G183450 Gossypium hirsutum HOM05D008224 ORTHO05D010083 7.0e-19 97.4 94 61.7
Atru.chr4.381 Acer truncatum HOM05D008224 ORTHO05D010083 1.2e-18 96.7 113 54.9
Lj4P218T44 Lonicera japonica HOM05D008224 ORTHO05D010083 1.2e-18 96.7 102 56.9
Psat2g155040 Pisum sativum HOM05D008224 ORTHO05D010083 2.7e-18 95.5 90 61.1
Glyma.11G076300 Glycine max HOM05D008224 ORTHO05D010083 3.5e-18 95.1 85 64.7
Gohir.A10G098400 Gossypium hirsutum HOM05D008224 ORTHO05D010083 3.5e-18 95.1 97 58.8
QL06p032684 Quercus lobata HOM05D008224 ORTHO05D010083 3.5e-18 95.1 100 57.0
QL12p007153 Quercus lobata HOM05D008224 ORTHO05D010083 4.5e-18 94.7 101 58.4
Peaxi162Scf00083g00052 Petunia axillaris HOM05D008224 ORTHO05D010083 7.8e-18 94.0 113 46.9
Gohir.D10G089800 Gossypium hirsutum HOM05D008224 ORTHO05D010083 1.3e-17 93.2 97 56.7
Gorai.011G098500 Gossypium raimondii HOM05D008224 ORTHO05D010083 1.3e-17 93.2 97 56.7
Haze_03767 Corylus avellana HOM05D008224 ORTHO05D010083 2.3e-17 92.4 101 62.4
Glyma.01G166900 Glycine max HOM05D008224 ORTHO05D010083 2.3e-17 92.4 85 64.7
Oeu064592.1 Olea europaea HOM05D008224 ORTHO05D010083 3.8e-17 91.7 93 51.6
Gohir.A11G175668 Gossypium hirsutum HOM05D008224 ORTHO05D010083 6.6e-17 90.9 97 58.8
Hma1.2p1_0258F.1_g104170 Hydrangea macrophylla HOM05D008224 ORTHO05D010083 8.6e-17 90.5 77 63.6
Ciclev10027456m.g Citrus clementina HOM05D008224 ORTHO05D010083 1.1e-16 90.1 101 53.5
Nitab4.5_0006286g0060 Nicotiana tabacum HOM05D008224 ORTHO05D010083 1.1e-16 90.1 90 53.3
TAR381G1028 Trochodendron aralioides HOM05D008224 ORTHO05D010083 1.1e-16 90.1 96 60.4
Aqoxy5G01777 Aquilegia oxysepala HOM05D008224 ORTHO05D010083 1.9e-16 89.4 108 53.7
Gorai.007G195300 Gossypium raimondii HOM05D008224 ORTHO05D010083 2.5e-16 89.0 99 56.6
Medtr5g021840 Medicago truncatula HOM05D008224 ORTHO05D010083 5.6e-16 87.8 84 58.3
Nitab4.5_0003271g0030 Nicotiana tabacum HOM05D008224 ORTHO05D010083 7.3e-16 87.4 90 51.1
Gorai.003G009900 Gossypium raimondii HOM05D008224 ORTHO05D010083 2.1e-15 85.9 92 52.2
Ca_25829_v3 Cicer arietinum L. HOM05D008224 ORTHO05D010083 2.8e-15 85.5 82 58.5
ClCG01G020280 Citrullus lanatus HOM05D008224 ORTHO05D010083 1.0e-14 83.6 94 47.9
TPR.G18188 Trifolium pratense HOM05D008224 ORTHO05D010083 1.0e-14 83.6 78 62.8
MELO3C007900.2 Cucumis melo HOM05D008224 ORTHO05D010083 2.3e-14 82.4 113 45.1
CsaV3_6G047070 Cucumis sativus L. HOM05D008224 ORTHO05D010083 5.2e-14 81.3 105 44.8
Lalb_Chr09g0321801 Lupinus albus HOM05D008224 ORTHO05D010083 5.2e-14 81.3 91 54.9
Nn1g05883 Nelumbo nucifera HOM05D008224 ORTHO05D010083 1.5e-13 79.7 75 57.3
Sp2g30460 Schrenkiella parvula HOM05D014245 ORTHO05D010083 1.5e-13 79.7 93 50.5
FvH4_1g11880 Fragaria vesca HOM05D008224 ORTHO05D010083 3.4e-13 78.6 83 59.0
FAN19G0355 Fragaria x ananassa HOM05D008224 ORTHO05D010083 3.4e-13 78.6 83 59.0
Carub.0008s2826 Capsella rubella HOM05D014245 ORTHO05D010083 4.4e-13 78.2 92 48.9
CARHR281490 Cardamine hirsuta HOM05D014245 ORTHO05D010083 9.8e-13 77.0 83 53.0
Sed0025479 Sechium edule HOM05D008224 ORTHO05D010083 1.3e-12 76.6 85 50.6
Hma1.2p1_0956F.1_g241380 Hydrangea macrophylla HOM05D008224 ORTHO05D010083 3.7e-12 75.1 87 55.2
Hma1.2p1_2239F.1_g317816 Hydrangea macrophylla HOM05D008224 ORTHO05D010083 3.7e-12 75.1 87 55.2
Actinidia22982 Actinidia chinensis HOM05D002668 ORTHO05D003295 4.9e-12 74.7 68 61.8
Thhalv10005172m.g Eutrema salsugineum HOM05D014245 ORTHO05D010083 4.9e-12 74.7 92 43.5
Cc07_g10680 Coffea canephora HOM05D008224 ORTHO05D010083 6.4e-12 74.3 88 48.9
AL8G45290 Arabidopsis lyrata HOM05D014245 ORTHO05D010083 1.4e-11 73.2 97 42.3
A06p26690 Brassica napus HOM05D014245 ORTHO05D010083 1.9e-11 72.8 94 42.6
ATR0627G002 Amborella trichopoda HOM05D008224 ORTHO05D010083 2.4e-11 72.4 91 47.3
Nn5g30159 Nelumbo nucifera HOM05D008224 ORTHO05D010083 2.4e-11 72.4 92 45.7
Actinidia17446 Actinidia chinensis HOM05D008224 ORTHO05D010083 4.1e-11 71.6 85 52.9
Actinidia28703 Actinidia chinensis HOM05D008224 ORTHO05D010083 4.1e-11 71.6 120 43.3
ECA246G4291 Erigeron canadensis HOM05D008224 ORTHO05D010083 7.0e-11 70.9 109 41.3
ATR0481G006 Amborella trichopoda HOM05D008224 ORTHO05D010083 1.2e-10 70.1 86 45.3
FAN26G2375 Fragaria x ananassa HOM05D011822 ORTHO05D010083 1.2e-10 70.1 66 59.1
BcaB02g10776 Brassica carinata HOM05D014245 ORTHO05D010083 1.6e-10 69.7 91 42.9
DCAR_016610 Daucus carota HOM05D008224 ORTHO05D010083 1.3e-09 66.6 79 54.4
Gohir.D03G009600 Gossypium hirsutum HOM05D008224 ORTHO05D010083 2.3e-09 65.9 68 52.9
EL10Ac6g15476 Beta vulgaris HOM05D008224 ORTHO05D010083 3.9e-09 65.1 125 39.2
Gohir.A02G170400 Gossypium hirsutum HOM05D008224 ORTHO05D010083 1.1e-08 63.5 68 51.5
Ah.03g148720 Amaranthus hybridus HOM05D008224 ORTHO05D010083 1.2e-07 60.1 127 34.6
Sc16g0002160 Simmondsia chinensis HOM05D008224 ORTHO05D010083 1.2e-07 60.1 98 38.8
Sed0001082 Sechium edule HOM05D008224 ORTHO05D010083 3.6e-07 58.5 95 42.1
Lsat_1_v5_gn_3_74461 Lactuca sativa HOM05D008224 ORTHO05D010083 4.7e-07 58.2 98 39.8
Rhsim10G0212800 Rhododendron simsii HOM05D008224 ORTHO05D010083 6.2e-07 57.8 77 44.2


User provided reference genes

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