Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.02G103801 Manihot esculenta HOM05D007514 ORTHO05D009469 2.1e-94 349.0 175 100.0
Potri.005G115000 Populus trichocarpa HOM05D007514 ORTHO05D009469 2.1e-49 199.5 184 60.3
Cpa.g.sc6.242 Carica papaya HOM05D007514 ORTHO05D009469 1.9e-42 176.4 179 57.5
TWI09G1362 Tripterygium wilfordii HOM05D007514 ORTHO05D009469 7.2e-42 174.5 175 58.3
Thecc.01G019700 Theobroma cacao HOM05D007514 ORTHO05D009469 2.6e-39 166.0 190 52.1
Ciclev10026620m.g Citrus clementina HOM05D007514 ORTHO05D009469 2.2e-38 162.9 179 54.2
Aa31LG8G15140 Aethionema arabicum HOM05D007514 ORTHO05D009469 1.1e-37 160.6 172 51.7
Duzib264G0291 Durio zibethinus HOM05D007514 ORTHO05D009469 3.2e-37 159.1 183 51.4
MSTRG.883 Avicennia marina HOM05D007514 ORTHO05D009469 4.1e-37 158.7 134 61.2
PGR119G2084 Punica granatum HOM05D007514 ORTHO05D009469 1.2e-36 157.1 169 54.4
CiPaw.07G058000 Carya illinoinensis HOM05D007514 ORTHO05D009469 1.6e-36 156.8 189 51.3
Sabra05G0094100 Salix brachista HOM05D007514 ORTHO05D009469 2.0e-36 156.4 187 50.3
Ah.01g021120 Amaranthus hybridus HOM05D007514 ORTHO05D009469 2.7e-36 156.0 173 53.2
AUR62011597 Chenopodium quinoa HOM05D007514 ORTHO05D009469 2.7e-36 156.0 153 56.9
A07p02710 Brassica napus HOM05D007514 ORTHO05D009469 1.0e-35 154.1 173 53.8
BraA07t28071Z Brassica rapa HOM05D007514 ORTHO05D009469 1.0e-35 154.1 173 53.8
MD02G1133200 Malus domestica HOM05D007514 ORTHO05D009469 1.0e-35 154.1 185 49.7
Hma1.2p1_0743F.1_g211610 Hydrangea macrophylla HOM05D007514 ORTHO05D009469 1.3e-35 153.7 105 72.4
Sc16g0002120 Simmondsia chinensis HOM05D007514 ORTHO05D009469 1.3e-35 153.7 161 53.4
THA.LOC104819752 Tarenaya hassleriana HOM05D007514 ORTHO05D009469 1.3e-35 153.7 179 50.3
Oeu059507.1 Olea europaea HOM05D007514 ORTHO05D009469 2.9e-35 152.5 124 61.3
SGA_v2.0_scaffold234G43648 Striga asiatica HOM05D007514 ORTHO05D009469 2.9e-35 152.5 145 57.2
Gohir.A02G170200 Gossypium hirsutum HOM05D007514 ORTHO05D009469 5.0e-35 151.8 190 47.9
Gohir.D03G009800 Gossypium hirsutum HOM05D007514 ORTHO05D009469 5.0e-35 151.8 185 50.3
Gorai.003G010100 Gossypium raimondii HOM05D007514 ORTHO05D009469 5.0e-35 151.8 188 49.5
BcaC06g36349 Brassica carinata HOM05D007514 ORTHO05D009469 6.6e-35 151.4 172 53.5
C07p05010 Brassica napus HOM05D007514 ORTHO05D009469 6.6e-35 151.4 172 53.5
BolC7t40902H Brassica oleracea HOM05D007514 ORTHO05D009469 6.6e-35 151.4 172 53.5
Prupe.7G167500 Prunus persica HOM05D007514 ORTHO05D009469 8.6e-35 151.0 193 47.7
Aqoxy5G01772 Aquilegia oxysepala HOM05D007514 ORTHO05D009469 1.9e-34 149.8 178 47.8
BcaB03g16581 Brassica carinata HOM05D007514 ORTHO05D009469 2.5e-34 149.4 172 52.9
Carub.0003s3210 Capsella rubella HOM05D007514 ORTHO05D009469 2.5e-34 149.4 132 59.1
COL.COLO4_21918 Corchorus olitorius HOM05D007514 ORTHO05D009469 2.5e-34 149.4 187 49.7
Nn6g32368 Nelumbo nucifera HOM05D007514 ORTHO05D009469 5.6e-34 148.3 169 51.5
CARHR108460 Cardamine hirsuta HOM05D007514 ORTHO05D009469 2.1e-33 146.4 171 50.3
Thhalv10022884m.g Eutrema salsugineum HOM05D007514 ORTHO05D009469 2.1e-33 146.4 144 56.9
AL3G51000 Arabidopsis lyrata HOM05D007514 ORTHO05D009469 4.7e-33 145.2 175 50.9
Sp3g31390 Schrenkiella parvula HOM05D007514 ORTHO05D009469 6.2e-33 144.8 180 50.6
Migut.L00252 Erythranthe guttata HOM05D007514 ORTHO05D009469 1.0e-32 144.1 141 57.4
Migut.L00394 Erythranthe guttata HOM05D007514 ORTHO05D009469 1.0e-32 144.1 141 57.4
DCAR_016611 Daucus carota HOM05D007514 ORTHO05D009469 1.4e-32 143.7 131 58.8
AT2G17972 Arabidopsis thaliana HOM05D007514 ORTHO05D009469 1.8e-32 143.3 174 49.4
QL06p032616 Quercus lobata HOM05D007514 ORTHO05D009469 2.3e-32 142.9 107 67.3
MBI05_g15346_MAGBIO Magnolia biondii HOM05D007514 ORTHO05D009469 4.0e-32 142.1 175 45.1
Cc07_g10640 Coffea canephora HOM05D007514 ORTHO05D009469 8.9e-32 141.0 165 50.3
Sed0026037 Sechium edule HOM05D007514 ORTHO05D009469 8.9e-32 141.0 166 48.8
unitig_26.g10012 Utricularia gibba HOM05D007514 ORTHO05D009469 8.9e-32 141.0 100 68.0
PGSC0003DMG401003636 Solanum tuberosum HOM05D007514 ORTHO05D009469 1.5e-31 140.2 128 57.0
VMungo0251G0111 Vigna mungo HOM05D007514 ORTHO05D009469 1.5e-31 140.2 160 48.1
Glyma.16G128900 Glycine max HOM05D007514 ORTHO05D009469 2.0e-31 139.8 174 47.1
TAR365G0263 Trochodendron aralioides HOM05D007514 ORTHO05D009469 2.0e-31 139.8 163 48.5
Haze_03771 Corylus avellana HOM05D007514 ORTHO05D009469 3.4e-31 139.0 183 48.1
PSO675G8043 Papaver somniferum HOM05D007514 ORTHO05D009469 9.8e-31 137.5 137 55.5
TAR365G1204 Trochodendron aralioides HOM05D007514 ORTHO05D009469 9.8e-31 137.5 163 47.9
Lsat_1_v5_gn_3_74241 Lactuca sativa HOM05D007514 ORTHO05D009469 2.9e-30 136.0 110 60.0
Cfa006967 Carpinus fangiana HOM05D007514 ORTHO05D009469 3.7e-30 135.6 82 79.3
Nitab4.5_0001959g0010 Nicotiana tabacum HOM05D007514 ORTHO05D009469 3.7e-30 135.6 131 56.5
Lj4g0013490 Lotus japonicus HOM05D007514 ORTHO05D009469 6.4e-30 134.8 92 68.5
Dinv33625 Davidia involucrata HOM05D007514 ORTHO05D009469 1.1e-29 134.0 143 52.4
Phvul.003G262200 Phaseolus vulgaris HOM05D007514 ORTHO05D009469 1.1e-29 134.0 118 55.9
ClCG01G020240 Citrullus lanatus HOM05D007514 ORTHO05D009469 1.4e-29 133.7 70 84.3
Glyma.02G048800 Glycine max HOM05D007514 ORTHO05D009469 1.4e-29 133.7 161 47.8
Lalb_Chr05g0229901 Lupinus albus HOM05D007514 ORTHO05D009469 1.9e-29 133.3 96 67.7
PSO541G1849 Papaver somniferum HOM05D007514 ORTHO05D009469 1.9e-29 133.3 139 54.7
CsaV3_6G047030 Cucumis sativus L. HOM05D007514 ORTHO05D009469 3.2e-29 132.5 180 47.2
Peaxi162Scf00083g00065 Petunia axillaris HOM05D007514 ORTHO05D009469 4.1e-29 132.1 147 51.7
CANSAT01G2848 Cannabis sativa HOM05D007514 ORTHO05D009469 9.2e-29 131.0 78 80.8
CSS0010041 Camellia sinensis var. sinensis HOM05D007514 ORTHO05D009469 2.0e-28 129.8 106 62.3
CSS0030936 Camellia sinensis var. sinensis HOM05D007514 ORTHO05D009469 2.0e-28 129.8 106 62.3
Nitab4.5_0006286g0070 Nicotiana tabacum HOM05D007514 ORTHO05D009469 3.5e-28 129.0 73 80.8
Ca_22373_v3 Cicer arietinum L. HOM05D007514 ORTHO05D009469 7.8e-28 127.9 178 45.5
Sopen02g028770 Solanum pennellii HOM05D007514 ORTHO05D009469 1.0e-27 127.5 73 78.1
MELO3C007896.2 Cucumis melo HOM05D007514 ORTHO05D009469 1.7e-27 126.7 193 46.1
EL10Ac9g21968 Beta vulgaris HOM05D007514 ORTHO05D009469 2.3e-27 126.3 105 60.0
Rhsim08G0034000 Rhododendron simsii HOM05D007514 ORTHO05D009469 3.9e-27 125.6 104 58.7
arahy.Tifrunner.gnm1.ann1.JXSY0Y Arachis hypogaea HOM05D007514 ORTHO05D009469 6.6e-27 124.8 73 76.7
FAN23G2896 Fragaria x ananassa HOM05D007514 ORTHO05D009469 6.6e-27 124.8 72 77.8
Atru.chr3.793 Acer truncatum HOM05D007514 ORTHO05D009469 8.6e-27 124.4 95 66.3
Lj2P467T19 Lonicera japonica HOM05D007514 ORTHO05D009469 1.1e-26 124.0 91 61.5
Duzib147G0981 Durio zibethinus HOM05D007514 ORTHO05D009469 2.5e-26 122.9 183 42.1
Medtr8g075960 Medicago truncatula HOM05D007514 ORTHO05D009469 2.5e-26 122.9 99 65.7
TPR.G30050 Trifolium pratense HOM05D007514 ORTHO05D009469 2.5e-26 122.9 100 61.0
arahy.Tifrunner.gnm1.ann1.EYR4CZ Arachis hypogaea HOM05D007514 ORTHO05D009469 3.3e-26 122.5 141 48.9
Psat4g099040 Pisum sativum HOM05D007514 ORTHO05D009469 5.6e-26 121.7 116 53.4
HPP92_025365 Vanilla planifolia HOM05D007514 ORTHO05D009469 5.6e-26 121.7 157 45.9
Os06g0715200 Oryza sativa ssp. japonica HOM05D007514 ORTHO05D009469 7.3e-26 121.3 70 75.7
SMO353G0320 Selaginella moellendorffii HOM05D007514 ORTHO05D009469 2.1e-25 119.8 115 53.0
FvH4_1g11940 Fragaria vesca HOM05D007514 ORTHO05D009469 3.6e-25 119.0 184 40.2
FAN19G0235 Fragaria x ananassa HOM05D007514 ORTHO05D009469 3.6e-25 119.0 184 40.2
FAN26G2491 Fragaria x ananassa HOM05D007514 ORTHO05D009469 3.6e-25 119.0 186 41.4
Zm00001eb228020 Zea mays HOM05D007514 ORTHO05D009469 1.8e-24 116.7 175 42.9
FAN28G1094 Fragaria x ananassa HOM05D007514 ORTHO05D009469 1.5e-23 113.6 165 44.8
arahy.Tifrunner.gnm1.ann1.KXHU4R Arachis hypogaea HOM05D007514 ORTHO05D009469 3.2e-21 105.9 67 73.1
CAN.G66.6 Capsicum annuum HOM05D007514 ORTHO05D009469 5.4e-21 105.1 85 63.5
Pp3c15_14110 Physcomitrium patens HOM05D007514 ORTHO05D009469 7.1e-21 104.8 112 50.0
AagrBONN_evm.TU.Sc2ySwM_344.4071 Anthoceros agrestis HOM05D007514 ORTHO05D009469 7.8e-20 101.3 105 46.7
Mapoly0011s0103 Marchantia polymorpha HOM05D007514 ORTHO05D009469 7.8e-20 101.3 70 64.3
SEGI_16775 Sequoiadendron giganteum HOM05D007514 ORTHO05D009469 1.0e-19 100.9 85 61.2
Cre05.g245102 Chlamydomonas reinhardtii HOM05D007514 ORTHO05D009469 4.9e-14 82.0 57 59.6
MCO09G231 Micromonas commoda HOM05D007514 ORTHO05D009469 1.7e-06 57.0 106 30.2
PRCOL_00005620 Prasinoderma coloniale HOM05D007514 ORTHO05D009469 6.4e-06 55.1 62 45.2


User provided reference genes

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