Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.02G095600 Manihot esculenta HOM05D004708 ORTHO05D005573 1.8e-93 345.9 177 100.0
Manes.01G136850 Manihot esculenta HOM05D004708 ORTHO05D005573 3.9e-75 285.0 169 85.2
Ciclev10026600m.g Citrus clementina HOM05D004708 ORTHO05D005573 3.6e-73 278.5 173 82.7
Thecc.03G010200 Theobroma cacao HOM05D004708 ORTHO05D005573 1.2e-71 273.5 171 81.3
Prupe.7G156900 Prunus persica HOM05D004708 ORTHO05D005573 3.4e-71 271.9 174 79.9
MD02G1144700 Malus domestica HOM05D004708 ORTHO05D005573 4.4e-71 271.6 171 78.9
Duzib084G0089 Durio zibethinus HOM05D004708 ORTHO05D005573 9.8e-71 270.4 171 80.1
MD15G1258400 Malus domestica HOM05D004708 ORTHO05D005573 1.3e-70 270.0 174 77.0
Atru.chr3.607 Acer truncatum HOM05D004708 ORTHO05D005573 4.9e-70 268.1 167 80.8
Cpa.g.sc6.137 Carica papaya HOM05D004708 ORTHO05D005573 4.9e-70 268.1 170 79.4
QL06p046600 Quercus lobata HOM05D004708 ORTHO05D005573 3.2e-69 265.4 168 78.6
COL.COLO4_34048 Corchorus olitorius HOM05D004708 ORTHO05D005573 2.7e-68 262.3 171 77.2
Gorai.008G067200 Gossypium raimondii HOM05D004708 ORTHO05D005573 3.5e-68 261.9 167 77.2
Dinv13509 Davidia involucrata HOM05D004708 ORTHO05D005573 1.7e-67 259.6 165 77.6
Gohir.A09G170800 Gossypium hirsutum HOM05D004708 ORTHO05D005573 1.7e-67 259.6 167 77.8
Potri.005G121200 Populus trichocarpa HOM05D004708 ORTHO05D005573 2.3e-67 259.2 172 77.3
Thecc.01G032800 Theobroma cacao HOM05D004708 ORTHO05D005573 3.0e-67 258.8 170 74.7
FvH4_1g13011 Fragaria vesca HOM05D004708 ORTHO05D005573 6.6e-67 257.7 172 74.4
TWI53G1618 Tripterygium wilfordii HOM05D004708 ORTHO05D005573 8.6e-67 257.3 169 75.1
CiPaw.01G043700 Carya illinoinensis HOM05D004708 ORTHO05D005573 1.5e-66 256.5 160 80.6
Carub.0003s3243 Capsella rubella HOM05D004708 ORTHO05D005573 1.9e-66 256.1 160 77.5
Gorai.006G188300 Gossypium raimondii HOM05D004708 ORTHO05D005573 1.9e-66 256.1 167 76.0
AL3G51520 Arabidopsis lyrata HOM05D004708 ORTHO05D005573 2.5e-66 255.8 171 74.9
Duzib264G1087 Durio zibethinus HOM05D004708 ORTHO05D005573 2.5e-66 255.8 164 76.8
HanXRQChr09g0261341 Helianthus annuus HOM05D004708 ORTHO05D005573 7.3e-66 254.2 156 81.4
Peaxi162Scf00008g03516 Petunia axillaris HOM05D004708 ORTHO05D005573 9.5e-66 253.8 171 74.3
vmacro17822 Vaccinium macrocarpon HOM05D004708 ORTHO05D005573 9.5e-66 253.8 167 76.0
Aa31LG8G15760 Aethionema arabicum HOM05D004708 ORTHO05D005573 1.2e-65 253.4 160 77.5
AT2G18250 Arabidopsis thaliana HOM05D004708 ORTHO05D005573 1.2e-65 253.4 160 76.9
Hma1.2p1_0224F.1_g094553 Hydrangea macrophylla HOM05D004708 ORTHO05D005573 1.2e-65 253.4 167 74.3
Lsat_1_v5_gn_4_148240 Lactuca sativa HOM05D004708 ORTHO05D005573 1.2e-65 253.4 161 76.4
Nitab4.5_0000136g0310 Nicotiana tabacum HOM05D004708 ORTHO05D005573 1.6e-65 253.1 170 72.9
CSS0040556 Camellia sinensis var. sinensis HOM05D004708 ORTHO05D005573 2.1e-65 252.7 170 73.5
ECA232G2192 Erigeron canadensis HOM05D004708 ORTHO05D005573 2.1e-65 252.7 173 75.1
Thhalv10022875m.g Eutrema salsugineum HOM05D004708 ORTHO05D005573 3.6e-65 251.9 160 76.2
GSVIVG01025946001 Vitis vinifera HOM05D004708 ORTHO05D005573 3.6e-65 251.9 166 76.5
CARHR108820 Cardamine hirsuta HOM05D004708 ORTHO05D005573 6.2e-65 251.1 171 72.5
Hund16439 Selenicereus undatus HOM05D004708 ORTHO05D005573 8.0e-65 250.8 162 75.3
CsaV3_3G014460 Cucumis sativus L. HOM05D004708 ORTHO05D005573 1.1e-64 250.4 169 74.6
RcHm_v2.0_Chr2g0101171 Rosa chinensis HOM05D004708 ORTHO05D005573 1.1e-64 250.4 177 71.8
Sopen02g013670 Solanum pennellii HOM05D004708 ORTHO05D005573 1.1e-64 250.4 170 72.4
GSVIVG01018936001 Vitis vinifera HOM05D004708 ORTHO05D005573 1.1e-64 250.4 161 76.4
Cc07_g09720 Coffea canephora HOM05D004708 ORTHO05D005573 1.4e-64 250.0 170 73.5
Sc16g0002660 Simmondsia chinensis HOM05D004708 ORTHO05D005573 1.4e-64 250.0 161 75.8
ClCG05G006010 Citrullus lanatus HOM05D000319 ORTHO05D000903 1.8e-64 249.6 168 73.2
Rhsim08G0118600 Rhododendron simsii HOM05D004708 ORTHO05D005573 1.8e-64 249.6 167 74.9
Sp3g31670 Schrenkiella parvula HOM05D004708 ORTHO05D005573 3.1e-64 248.8 171 72.5
Solyc02g062640.4 Solanum lycopersicum HOM05D004708 ORTHO05D005573 3.1e-64 248.8 167 73.7
BcaC04g22917 Brassica carinata HOM05D004708 ORTHO05D005573 4.0e-64 248.4 170 72.4
CSS0030971 Camellia sinensis var. sinensis HOM05D004708 ORTHO05D005573 5.2e-64 248.1 170 73.5
DCAR_023857 Daucus carota HOM05D004708 ORTHO05D005573 5.2e-64 248.1 160 75.0
MSTRG.23511 Avicennia marina HOM05D004708 ORTHO05D005573 6.8e-64 247.7 168 73.8
PGSC0003DMG400015508 Solanum tuberosum HOM05D004708 ORTHO05D005573 6.8e-64 247.7 163 75.5
BolC9t54282H Brassica oleracea HOM05D004708 ORTHO05D005573 8.9e-64 247.3 170 71.8
BcaB07g31677 Brassica carinata HOM05D004708 ORTHO05D005573 1.2e-63 246.9 159 75.5
PGR119G0658 Punica granatum HOM05D004708 ORTHO05D005573 1.5e-63 246.5 174 74.7
CAN.G111.48 Capsicum annuum HOM05D004708 ORTHO05D005573 2.0e-63 246.1 167 72.5
COL.COLO4_22050 Corchorus olitorius HOM05D004708 ORTHO05D005573 3.4e-63 245.4 167 74.3
MELO3C006648.2 Cucumis melo HOM05D004708 ORTHO05D005573 7.5e-63 244.2 168 72.6
THA.LOC104807464 Tarenaya hassleriana HOM05D004708 ORTHO05D005573 7.5e-63 244.2 198 66.2
A07p02450 Brassica napus HOM05D004708 ORTHO05D005573 9.8e-63 243.8 162 72.8
BraA07t28041Z Brassica rapa HOM05D004708 ORTHO05D005573 9.8e-63 243.8 162 72.8
Actinidia19193 Actinidia chinensis HOM05D004708 ORTHO05D005573 1.3e-62 243.4 170 70.6
BcaB03g16615 Brassica carinata HOM05D004708 ORTHO05D005573 1.3e-62 243.4 170 71.8
DCAR_032374 Daucus carota HOM05D004708 ORTHO05D005573 1.7e-62 243.0 160 73.8
Aqoxy5G01592 Aquilegia oxysepala HOM05D004708 ORTHO05D005573 2.2e-62 242.7 157 75.2
BcaC06g36391 Brassica carinata HOM05D004708 ORTHO05D005573 2.9e-62 242.3 170 70.6
EL10Ac6g15543 Beta vulgaris HOM05D004708 ORTHO05D005573 6.4e-62 241.1 171 70.8
Hund13990 Selenicereus undatus HOM05D004708 ORTHO05D005573 6.4e-62 241.1 166 70.5
AUR62004070 Chenopodium quinoa HOM05D004708 ORTHO05D005573 1.9e-61 239.6 165 72.1
BolC7t40861H Brassica oleracea HOM05D004708 ORTHO05D005573 3.2e-61 238.8 170 70.0
MD15G1258500 Malus domestica HOM05D004708 ORTHO05D005573 3.2e-61 238.8 164 72.6
CAN.G1645.15 Capsicum annuum HOM05D004708 ORTHO05D005573 4.1e-61 238.4 167 70.7
Migut.H00962 Erythranthe guttata HOM05D004708 ORTHO05D005573 4.1e-61 238.4 167 73.1
SalBow6G2211 Salvia bowleyana HOM05D004708 ORTHO05D005573 5.4e-61 238.0 161 72.7
C07p04600 Brassica napus HOM05D004708 ORTHO05D005573 7.1e-61 237.7 170 69.4
Aqoxy3G01739 Aquilegia oxysepala HOM05D004708 ORTHO05D005573 9.2e-61 237.3 171 67.8
Hma1.2p1_0789F.1_g218250 Hydrangea macrophylla HOM05D004708 ORTHO05D005573 1.2e-60 236.9 171 70.2
VMungo1215G3002 Vigna mungo HOM05D004708 ORTHO05D005573 1.2e-60 236.9 164 70.1
Sabra05G0099900 Salix brachista HOM05D004708 ORTHO05D005573 2.7e-60 235.7 217 61.3
Lj2g0001027 Lotus japonicus HOM05D002605 ORTHO05D002842 7.8e-60 234.2 170 70.6
arahy.Tifrunner.gnm1.ann1.Y7U3HW Arachis hypogaea HOM05D004708 ORTHO05D005573 1.0e-59 233.8 171 70.2
FAN19G0555 Fragaria x ananassa HOM05D004708 ORTHO05D005573 1.0e-59 233.8 210 61.4
arahy.Tifrunner.gnm1.ann1.V6C6W3 Arachis hypogaea HOM05D004708 ORTHO05D005573 1.3e-59 233.4 171 70.8
arahy.Tifrunner.gnm1.ann1.CZ32YF Arachis hypogaea HOM05D004708 ORTHO05D005573 1.7e-59 233.0 171 70.2
Lalb_Chr05g0212721 Lupinus albus HOM05D004708 ORTHO05D005573 1.7e-59 233.0 167 71.9
AUR62007583 Chenopodium quinoa HOM05D004708 ORTHO05D005573 3.0e-59 232.3 159 72.3
PSO764G0091 Papaver somniferum HOM05D004708 ORTHO05D005573 3.0e-59 232.3 156 73.7
Medtr5g020680 Medicago truncatula HOM05D004708 ORTHO05D005573 3.9e-59 231.9 171 69.0
Ca_24863_v3 Cicer arietinum L. HOM05D004708 ORTHO05D005573 5.1e-59 231.5 164 71.3
Glyma.01G173050 Glycine max HOM05D004708 ORTHO05D005573 5.1e-59 231.5 164 70.7
Psat2g158360 Pisum sativum HOM05D004708 ORTHO05D005573 6.6e-59 231.1 171 67.8
PSO339G0290 Papaver somniferum HOM05D004708 ORTHO05D005573 1.9e-58 229.6 155 73.5
SGA_v2.0_scaffold258G45779 Striga asiatica HOM05D004708 ORTHO05D005573 1.9e-58 229.6 169 68.6
unitig_21.g20250 Utricularia gibba HOM05D004708 ORTHO05D005573 1.9e-58 229.6 167 68.9
TPR.G2405 Trifolium pratense HOM05D004708 ORTHO05D005573 7.3e-58 227.6 171 67.3
ATR0796G251 Amborella trichopoda HOM05D004708 ORTHO05D005573 1.6e-57 226.5 159 71.7
Ca_21297_v3 Cicer arietinum L. HOM05D004708 ORTHO05D005573 2.1e-57 226.1 164 69.5
Lsat_1_v5_gn_2_77221 Lactuca sativa HOM05D004708 ORTHO05D005573 2.8e-57 225.7 156 71.8
Medtr8g073890 Medicago truncatula HOM05D004708 ORTHO05D005573 4.7e-57 224.9 163 69.3
Phvul.002G032200 Phaseolus vulgaris HOM05D004708 ORTHO05D005573 4.7e-57 224.9 164 67.1
FAN25G0668 Fragaria x ananassa HOM05D004708 ORTHO05D005573 1.8e-56 223.0 167 66.5
Os07g0179400 Oryza sativa ssp. japonica HOM05D004708 ORTHO05D005573 2.3e-56 222.6 153 69.9
Gohir.A12G064100 Gossypium hirsutum HOM05D004708 ORTHO05D005573 3.1e-56 222.2 167 68.3
TAR624G0473 Trochodendron aralioides HOM05D004708 ORTHO05D005573 3.1e-56 222.2 154 72.1
arahy.Tifrunner.gnm1.ann1.KFYL3R Arachis hypogaea HOM05D004708 ORTHO05D005573 1.5e-55 219.9 171 68.4
ECA238G4849 Erigeron canadensis HOM05D004708 ORTHO05D005573 2.6e-55 219.2 156 68.6
Zm00001eb231510 Zea mays HOM05D004708 ORTHO05D005573 9.9e-55 217.2 157 66.2
CDE12G0116 Ceratophyllum demersum HOM05D004708 ORTHO05D005573 2.9e-54 215.7 157 68.8
SEGI_37374 Sequoiadendron giganteum HOM05D004708 ORTHO05D005573 6.4e-54 214.5 159 66.7
FAN21G0333 Fragaria x ananassa HOM05D004708 ORTHO05D005573 4.1e-53 211.8 166 62.0
CDE01G0816 Ceratophyllum demersum HOM05D004708 ORTHO05D005573 7.1e-53 211.1 150 70.7
HPP92_014750 Vanilla planifolia HOM05D004708 ORTHO05D005573 3.5e-52 208.8 146 69.9
Gohir.D09G166500 Gossypium hirsutum HOM05D004708 ORTHO05D005573 1.7e-51 206.5 171 64.9
Hma1.2p1_1820F.1_g304110 Hydrangea macrophylla HOM05D004708 ORTHO05D005573 8.6e-51 204.1 135 75.6
Dinv39998 Davidia involucrata HOM05D004708 ORTHO05D005573 9.6e-50 200.7 165 64.2
Glyma.02G276900 Glycine max HOM05D004708 ORTHO05D005573 1.6e-49 199.9 140 68.6
BcaC04g22919 Brassica carinata HOM05D004708 ORTHO05D005573 3.6e-49 198.7 198 55.6
Pp3c18_16890 Physcomitrium patens HOM05D004708 ORTHO05D005573 5.8e-47 191.4 162 59.3
C09p13900 Brassica napus HOM05D004708 ORTHO05D005573 9.9e-47 190.7 172 59.9
SMO357G0013 Selaginella moellendorffii HOM05D004708 ORTHO05D005573 1.3e-46 190.3 154 61.0
FvH4_3g26020 Fragaria vesca HOM05D004708 ORTHO05D005573 3.8e-46 188.7 135 65.2
SMO318G0001 Selaginella moellendorffii HOM05D004708 ORTHO05D005573 3.8e-46 188.7 170 56.5
A09p11790 Brassica napus HOM05D004708 ORTHO05D005573 1.9e-45 186.4 129 72.9
Gohir.D12G064000 Gossypium hirsutum HOM05D004708 ORTHO05D005573 3.5e-44 182.2 108 78.7
CARHR108850 Cardamine hirsuta HOM05D004708 ORTHO05D005573 6.0e-44 181.4 120 72.5
Lj2A454G55 Lonicera japonica HOM05D004708 ORTHO05D005573 6.9e-40 167.9 140 62.1
Mapoly0065s0018 Marchantia polymorpha HOM05D004708 ORTHO05D005573 2.6e-39 166.0 149 57.0
Zm00001eb301320 Zea mays HOM05D004708 ORTHO05D005573 4.4e-39 165.2 152 57.2
PSO384G2349 Papaver somniferum HOM05D004708 ORTHO05D005573 2.9e-38 162.5 156 57.1
PSO731G0046 Papaver somniferum HOM05D004708 ORTHO05D005573 2.9e-38 162.5 114 72.8
FAN11G2897 Fragaria x ananassa HOM05D004708 ORTHO05D009899 4.2e-37 158.7 171 52.6
Nitab4.5_0009165g0010 Nicotiana tabacum HOM05D000001 ORTHO05D013582 9.3e-37 157.5 103 76.7
Peaxi162Scf00130g00618 Petunia axillaris HOM05D004708 ORTHO05D005573 9.3e-37 157.5 157 54.1
CSS0019358 Camellia sinensis var. sinensis HOM05D004708 ORTHO05D005573 1.6e-36 156.8 112 73.2
Nn7g38122 Nelumbo nucifera HOM05D004708 ORTHO05D005573 1.3e-35 153.7 100 72.0
CBR_g4476 Chara braunii HOM05D003322 ORTHO05D004228 3.9e-35 152.1 151 52.3
Os02g0134000 Oryza sativa ssp. japonica HOM05D004708 ORTHO05D005573 9.0e-32 141.0 106 64.2
BraA09t36827Z Brassica rapa HOM05D004708 ORTHO05D005573 1.5e-31 140.2 103 71.8
CAN.G2875.1 Capsicum annuum HOM05D004708 ORTHO05D005573 8.4e-30 134.4 92 73.9
FAN26G2067 Fragaria x ananassa HOM05D004708 ORTHO05D005573 1.1e-29 134.0 84 72.6
Actinidia33865 Actinidia chinensis HOM05D004708 ORTHO05D005573 4.8e-25 118.6 89 69.7
AagrBONN_evm.TU.Sc2ySwM_228.2017 Anthoceros agrestis HOM05D004708 ORTHO05D005573 3.1e-24 115.9 108 57.4
Pp3c18_18790 Physcomitrium patens HOM05D004708 ORTHO05D005573 6.9e-24 114.8 162 42.0
HanXRQChr17g0534461 Helianthus annuus HOM05D004708 ORTHO05D005573 1.0e-19 100.9 57 78.9
Cre13.g590550 Chlamydomonas reinhardtii HOM05D004708 ORTHO05D005573 3.0e-19 99.4 181 33.7
arahy.Tifrunner.gnm1.ann1.W5EA8A Arachis hypogaea HOM05D004708 ORTHO05D005573 3.9e-19 99.0 89 60.7
CAN.G53.14 Capsicum annuum HOM05D004708 ORTHO05D005573 3.9e-19 99.0 57 80.7
AagrBONN_evm.TU.Sc2ySwM_368.1168 Anthoceros agrestis HOM05D004708 ORTHO05D005573 6.2e-17 91.7 69 66.7
C09p74780 Brassica napus HOM05D004708 ORTHO05D005573 2.6e-15 86.3 59 69.5
C09p74830 Brassica napus HOM05D004708 ORTHO05D005573 2.6e-15 86.3 59 69.5
CAN.G53.15 Capsicum annuum HOM05D004708 ORTHO05D005573 5.0e-14 82.0 55 74.5
Cfa027114 Carpinus fangiana HOM05D004708 ORTHO05D005573 6.5e-14 81.6 195 29.2
MCO08G231 Micromonas commoda HOM05D004708 ORTHO05D005573 4.2e-13 79.0 157 33.1
SGA_v2.0_scaffold276G46612 Striga asiatica HOM05D004708 ORTHO05D005573 2.7e-12 76.3 113 47.8
BcaC06g36392 Brassica carinata HOM05D000492 ORTHO05D005571 1.3e-11 73.9 55 65.5
Oeu044133.1 Olea europaea HOM05D004708 ORTHO05D005573 1.3e-11 73.9 45 77.8
PRCOL_00004729 Prasinoderma coloniale HOM05D004708 ORTHO05D005573 3.9e-11 72.4 151 32.5
Actinidia12710 Actinidia chinensis HOM05D004708 ORTHO05D005573 1.3e-06 57.4 48 56.2


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