Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.02G092300 Manihot esculenta HOM05D006571 ORTHO05D007771 1.2e-171 607.1 465 100.0
Thecc.01G037900 Theobroma cacao HOM05D006571 ORTHO05D007771 4.8e-125 452.2 468 81.4
Manes.01G133900 Manihot esculenta HOM05D006571 ORTHO05D007771 1.4e-121 440.7 410 83.4
Duzib187G0259 Durio zibethinus HOM05D006571 ORTHO05D007771 4.1e-116 422.5 407 79.4
Duzib147G0515 Durio zibethinus HOM05D006571 ORTHO05D007771 4.5e-115 419.1 406 83.0
Prupe.7G152600 Prunus persica HOM05D006571 ORTHO05D007771 2.5e-113 413.3 417 76.5
Haze_15108 Corylus avellana HOM05D006571 ORTHO05D007771 7.2e-113 411.8 393 79.9
arahy.Tifrunner.gnm1.ann1.J8IV3X Arachis hypogaea HOM05D006571 ORTHO05D007771 9.4e-113 411.4 405 78.8
Potri.005G124700 Populus trichocarpa HOM05D006571 ORTHO05D007771 3.0e-111 406.4 412 78.9
CiPaw.02G016100 Carya illinoinensis HOM05D006571 ORTHO05D007771 5.1e-111 405.6 406 78.3
Gorai.007G204400 Gossypium raimondii HOM05D006571 ORTHO05D007771 2.0e-110 403.7 418 74.4
Glyma.16G140800 Glycine max HOM05D006571 ORTHO05D007771 9.7e-110 401.4 422 70.4
Phvul.003G252700 Phaseolus vulgaris HOM05D006571 ORTHO05D007771 1.3e-109 401.0 471 70.5
TWI09G0338 Tripterygium wilfordii HOM05D006571 ORTHO05D007771 6.3e-109 398.7 407 70.0
TWI53G0501 Tripterygium wilfordii HOM05D006571 ORTHO05D007771 3.1e-108 396.4 406 70.0
FvH4_1g13531 Fragaria vesca HOM05D006571 ORTHO05D007771 4.1e-108 396.0 471 75.8
VMungo0251G2973 Vigna mungo HOM05D006571 ORTHO05D007771 2.0e-107 393.7 412 73.1
Sabra05G0102400 Salix brachista HOM05D006571 ORTHO05D007771 2.6e-107 393.3 438 60.0
Gohir.D11G191700 Gossypium hirsutum HOM05D006571 ORTHO05D007771 3.4e-107 392.9 418 74.2
RcHm_v2.0_Chr2g0101911 Rosa chinensis HOM05D006571 ORTHO05D007771 5.9e-107 392.1 478 74.3
Glyma.02G057800 Glycine max HOM05D006571 ORTHO05D007771 2.2e-106 390.2 420 70.2
MD02G1150500 Malus domestica HOM05D006571 ORTHO05D007771 2.9e-106 389.8 475 76.0
arahy.Tifrunner.gnm1.ann1.P9WABM Arachis hypogaea HOM05D006571 ORTHO05D007771 1.9e-105 387.1 370 79.5
FAN26G3136 Fragaria x ananassa HOM05D006571 ORTHO05D007771 3.2e-105 386.3 478 74.7
Dinv26822 Davidia involucrata HOM05D006571 ORTHO05D007771 7.2e-105 385.2 474 68.4
SalBow5G2751 Salvia bowleyana HOM05D006571 ORTHO05D007771 9.4e-105 384.8 482 69.3
FAN23G2572 Fragaria x ananassa HOM05D006571 ORTHO05D007771 2.7e-104 383.3 411 76.6
Gohir.A11G185200 Gossypium hirsutum HOM05D006571 ORTHO05D007771 2.7e-104 383.3 420 75.5
QL06p045652 Quercus lobata HOM05D006571 ORTHO05D007771 3.9e-103 379.4 406 77.6
Lalb_Chr09g0322511 Lupinus albus HOM05D006571 ORTHO05D007771 5.1e-103 379.0 406 70.4
Cc07_g09340 Coffea canephora HOM05D006571 ORTHO05D007771 1.5e-102 377.5 414 76.1
Sabra07G0024000 Salix brachista HOM05D006571 ORTHO05D007771 2.6e-102 376.7 449 65.3
Gohir.A02G164500 Gossypium hirsutum HOM05D006571 ORTHO05D007771 3.3e-102 376.3 389 71.7
CANSAT01G0415 Cannabis sativa HOM05D006571 ORTHO05D007771 1.1e-100 371.3 378 77.8
TAR376G1222 Trochodendron aralioides HOM05D006571 ORTHO05D007771 1.4e-100 370.9 420 68.3
PGR102G1801 Punica granatum HOM05D006571 ORTHO05D007771 4.1e-100 369.4 423 73.3
Lalb_Chr16g0377891 Lupinus albus HOM05D006571 ORTHO05D007771 3.5e-99 366.3 406 68.7
Duzib264G0679 Durio zibethinus HOM05D006571 ORTHO05D007771 4.5e-99 365.9 467 71.3
GSVIVG01018984001 Vitis vinifera HOM05D006571 ORTHO05D007771 1.0e-98 364.8 403 62.8
Psat4g091960 Pisum sativum HOM05D006571 ORTHO05D007771 6.5e-98 362.1 416 70.0
Atru.chr3.554 Acer truncatum HOM05D006571 ORTHO05D007771 8.5e-98 361.7 407 72.7
Nitab4.5_0001466g0040 Nicotiana tabacum HOM05D006571 ORTHO05D007771 1.5e-97 360.9 436 68.3
TPR.G34976 Trifolium pratense HOM05D006571 ORTHO05D007771 1.9e-97 360.5 422 70.9
CiPaw.01G036100 Carya illinoinensis HOM05D006571 ORTHO05D007771 3.2e-97 359.8 407 70.0
Potri.007G027500 Populus trichocarpa HOM05D006571 ORTHO05D007771 7.2e-97 358.6 408 76.7
Hma1.2p1_0400F.1_g144570 Hydrangea macrophylla HOM05D006571 ORTHO05D007771 1.2e-96 357.8 441 68.9
Oeu023993.1 Olea europaea HOM05D006571 ORTHO05D007771 1.6e-96 357.5 419 64.4
MD15G1265000 Malus domestica HOM05D006571 ORTHO05D007771 2.7e-96 356.7 332 83.4
Lj4g0016878 Lotus japonicus HOM05D006571 ORTHO05D007771 6.1e-96 355.5 479 67.4
Ca_22257_v3 Cicer arietinum L. HOM05D006571 ORTHO05D007771 1.4e-95 354.4 407 69.0
Gohir.D03G015600 Gossypium hirsutum HOM05D006571 ORTHO05D007771 2.3e-95 353.6 245 78.8
Gorai.003G015800 Gossypium raimondii HOM05D006571 ORTHO05D007771 2.3e-95 353.6 245 78.8
Solyc03g034080.4 Solanum lycopersicum HOM05D006571 ORTHO05D007771 2.6e-94 350.1 412 67.2
Medtr8g077860 Medicago truncatula HOM05D006571 ORTHO05D007771 9.7e-94 348.2 427 65.6
Migut.L00283 Erythranthe guttata HOM05D006571 ORTHO05D007771 1.7e-93 347.4 413 71.9
AL5G30850 Arabidopsis lyrata HOM05D006571 ORTHO05D007771 4.8e-93 345.9 441 58.0
COL.COLO4_22100 Corchorus olitorius HOM05D006571 ORTHO05D007771 3.1e-92 343.2 207 89.9
CSS0027902 Camellia sinensis var. sinensis HOM05D006571 ORTHO05D007771 5.3e-92 342.4 418 66.7
PGSC0003DMG400017777 Solanum tuberosum HOM05D006571 ORTHO05D007771 3.5e-91 339.7 423 63.4
Actinidia36549 Actinidia chinensis HOM05D006571 ORTHO05D007771 2.2e-90 337.0 406 67.5
THA.LOC104807447 Tarenaya hassleriana HOM05D006571 ORTHO05D007771 2.9e-90 336.7 343 70.3
CAN.G1028.5 Capsicum annuum HOM05D006571 ORTHO05D007771 3.8e-90 336.3 412 68.7
Sc03g0000790 Simmondsia chinensis HOM05D006571 ORTHO05D007771 3.8e-90 336.3 279 74.9
CARHR160190 Cardamine hirsuta HOM05D006571 ORTHO05D007771 6.5e-90 335.5 409 65.5
Aqoxy6G01074 Aquilegia oxysepala HOM05D006571 ORTHO05D007771 3.2e-89 333.2 442 61.3
Hund14147 Selenicereus undatus HOM05D006571 ORTHO05D007771 4.2e-89 332.8 414 72.5
Sopen03g006860 Solanum pennellii HOM05D006571 ORTHO05D007771 1.6e-88 330.9 405 67.4
Aa31LG4G18850 Aethionema arabicum HOM05D006571 ORTHO05D007771 1.0e-87 328.2 442 65.6
Actinidia12116 Actinidia chinensis HOM05D006571 ORTHO05D007771 1.2e-86 324.7 472 64.0
Carub.0005s1702 Capsella rubella HOM05D006571 ORTHO05D007771 2.0e-86 323.9 442 62.4
AT3G50690 Arabidopsis thaliana HOM05D006571 ORTHO05D007771 9.8e-86 321.6 422 63.5
MBI16_g37746_MAGBIO Magnolia biondii HOM05D006571 ORTHO05D007771 4.8e-85 319.3 411 69.8
Oeu044138.1 Olea europaea HOM05D006571 ORTHO05D007771 1.4e-84 317.8 437 56.3
HanXRQChr16g0530131 Helianthus annuus HOM05D006571 ORTHO05D007771 3.5e-83 313.2 414 69.1
ATR0733G171 Amborella trichopoda HOM05D006571 ORTHO05D007771 2.9e-82 310.1 427 63.7
CDE07G0561 Ceratophyllum demersum HOM05D006571 ORTHO05D007771 1.2e-80 304.7 439 62.6
Nn1g05052 Nelumbo nucifera HOM05D006571 ORTHO05D007771 1.6e-80 304.3 445 60.0
SGA_v2.0_scaffold402G50988 Striga asiatica HOM05D006571 ORTHO05D007771 2.3e-79 300.4 494 56.5
Oeu024877.2 Olea europaea HOM05D006571 ORTHO05D007771 5.2e-79 299.3 258 63.2
CDE04G1022 Ceratophyllum demersum HOM05D006571 ORTHO05D007771 4.4e-78 296.2 206 78.6
Lj2P450T8 Lonicera japonica HOM05D006571 ORTHO05D007771 1.3e-77 294.7 337 67.7
ECA246G1775 Erigeron canadensis HOM05D006571 ORTHO05D007771 1.4e-76 291.2 229 72.1
Thhalv10025306m.g Eutrema salsugineum HOM05D006571 ORTHO05D007771 1.8e-76 290.8 210 76.2
AUR62003170 Chenopodium quinoa HOM05D006571 ORTHO05D007771 2.4e-76 290.4 165 87.3
Peaxi162Scf00751g00044 Petunia axillaris HOM05D006571 ORTHO05D007771 3.1e-76 290.0 209 76.6
EL10Ac6g14930 Beta vulgaris HOM05D006571 ORTHO05D007771 2.0e-75 287.3 165 85.5
GSVIVG01031937001 Vitis vinifera HOM05D006571 ORTHO05D007771 8.3e-69 265.4 160 78.1
TAR628G0135 Trochodendron aralioides HOM05D006571 ORTHO05D007771 7.0e-68 262.3 147 86.4
Hma1.2p1_0066F.1_g036610 Hydrangea macrophylla HOM05D006571 ORTHO05D007771 1.2e-67 261.5 209 67.0
BcaNung04428 Brassica carinata HOM05D006571 ORTHO05D007771 8.6e-66 255.4 165 75.2
BraA01t00212Z Brassica rapa HOM05D006571 ORTHO05D007771 1.2e-64 251.5 165 72.7
THA.LOC104804229 Tarenaya hassleriana HOM05D006571 ORTHO05D007771 2.1e-64 250.8 187 69.0
BcaNung00714 Brassica carinata HOM05D006571 ORTHO05D007771 2.8e-64 250.4 206 67.0
C01p02460 Brassica napus HOM05D006571 ORTHO05D007771 2.8e-64 250.4 206 67.0
BolC1t00234H Brassica oleracea HOM05D006571 ORTHO05D007771 2.8e-64 250.4 206 67.0
A01p02240 Brassica napus HOM05D006571 ORTHO05D007771 6.2e-64 249.2 165 72.1
PSO170G0995 Papaver somniferum HOM05D006571 ORTHO05D007771 4.0e-63 246.5 202 71.3
PSO764G0269 Papaver somniferum HOM05D006571 ORTHO05D007771 7.5e-62 242.3 201 70.1
AUR62007988 Chenopodium quinoa HOM05D006571 ORTHO05D007771 5.4e-60 236.1 371 65.8
Zm00001eb327200 Zea mays HOM05D006571 ORTHO05D007771 3.5e-59 233.4 264 54.9
Mapoly0013s0183 Marchantia polymorpha HOM05D006571 ORTHO05D007771 6.6e-58 229.2 165 68.5
Lj9A368T57 Lonicera japonica HOM05D006571 ORTHO05D007771 7.3e-57 225.7 253 56.5
SMO144G0154 Selaginella moellendorffii HOM05D006571 ORTHO05D007771 4.7e-56 223.0 164 67.1
Pp3c2_24900 Physcomitrium patens HOM05D006571 ORTHO05D007771 2.8e-48 197.2 163 60.7
Pp3c2_24950 Physcomitrium patens HOM05D006571 ORTHO05D007771 2.8e-48 197.2 163 60.7
Pp3c1_12220 Physcomitrium patens HOM05D006571 ORTHO05D007771 3.4e-46 190.3 166 59.0
Pp3c1_12230 Physcomitrium patens HOM05D006571 ORTHO05D007771 3.4e-46 190.3 166 59.0
SEGI_17530 Sequoiadendron giganteum HOM05D006571 ORTHO05D007771 1.1e-41 175.3 152 61.2
Zm00001eb217610 Zea mays HOM05D006571 ORTHO05D007771 7.3e-33 146.0 189 50.8
Zm00001eb052260 Zea mays HOM05D006571 ORTHO05D007771 6.4e-29 132.9 167 47.9
Os03g0668900 Oryza sativa ssp. japonica HOM05D006571 ORTHO05D007771 1.1e-25 122.1 166 44.6
Cre08.g363700 Chlamydomonas reinhardtii HOM05D006571 ORTHO05D007771 7.6e-22 109.4 159 42.8
Zm00001eb205800 Zea mays HOM05D006571 ORTHO05D007771 1.3e-16 92.0 139 41.0
Oeu000712.1 Olea europaea HOM05D006571 ORTHO05D007771 1.8e-15 88.2 62 71.0
TAR628G0345 Trochodendron aralioides HOM05D006571 ORTHO05D007771 2.6e-14 84.3 284 58.5
MCO02G270 Micromonas commoda HOM05D006571 ORTHO05D007771 6.0e-11 73.2 112 39.3
Zm00001eb386610 Zea mays HOM05D006571 ORTHO05D007771 2.3e-10 71.2 95 44.2
Nitab4.5_0001038g0160 Nicotiana tabacum HOM05D006571 ORTHO05D007771 4.8e-08 63.5 99 58.6
Cre16.g679600 Chlamydomonas reinhardtii HOM05D005498 ORTHO05D006719 4.1e-07 60.5 110 35.5
Zm00001eb426950 Zea mays HOM05D022938 ORTHO05D007771 6.9e-07 59.7 82 43.9
Actinidia02775 Actinidia chinensis HOM05D006571 ORTHO05D007771 2.0e-06 58.2 104 44.2


User provided reference genes

Program Settings