Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.02G074600 Manihot esculenta HOM05D006437 ORTHO05D007973 2.0e-36 155.2 75 100.0
Eucgr.F02822 Eucalyptus grandis HOM05D006437 ORTHO05D007973 2.1e-30 135.2 73 83.6
Glyma.11G218400 Glycine max HOM05D006437 ORTHO05D007973 3.6e-30 134.4 73 82.2
Glyma.18G038851 Glycine max HOM05D006437 ORTHO05D007973 3.6e-30 134.4 73 82.2
HanXRQChr07g0193741 Helianthus annuus HOM05D006437 ORTHO05D007973 3.6e-30 134.4 75 81.3
Nitab4.5_0004399g0060 Nicotiana tabacum HOM05D006437 ORTHO05D007973 4.7e-30 134.0 73 83.6
Nn4g24140 Nelumbo nucifera HOM05D006437 ORTHO05D007973 6.1e-30 133.7 73 80.8
Solyc02g091390.3 Solanum lycopersicum HOM05D006437 ORTHO05D007973 6.1e-30 133.7 73 82.2
Sopen02g036010 Solanum pennellii HOM05D006437 ORTHO05D007973 6.1e-30 133.7 73 82.2
PGSC0003DMG400030646 Solanum tuberosum HOM05D006437 ORTHO05D007973 6.1e-30 133.7 73 82.2
Aqoxy5G01129 Aquilegia oxysepala HOM05D006437 ORTHO05D007973 7.9e-30 133.3 73 80.8
Ca_08164_v3 Cicer arietinum L. HOM05D006437 ORTHO05D007973 7.9e-30 133.3 72 81.9
TAR629G2663 Trochodendron aralioides HOM05D006437 ORTHO05D007973 7.9e-30 133.3 73 83.6
SalBow7G1639 Salvia bowleyana HOM05D006437 ORTHO05D007973 1.4e-29 132.5 73 79.5
TPR.G15845 Trifolium pratense HOM05D006437 ORTHO05D007973 1.8e-29 132.1 73 78.1
Migut.L00468 Erythranthe guttata HOM05D006437 ORTHO05D007973 2.3e-29 131.7 73 79.5
Lalb_Chr10g0104491 Lupinus albus HOM05D006437 ORTHO05D007973 2.3e-29 131.7 73 79.5
MD09G1261500 Malus domestica HOM05D006437 ORTHO05D007973 2.3e-29 131.7 73 82.2
Phvul.001G231901 Phaseolus vulgaris HOM05D006437 ORTHO05D007973 3.0e-29 131.3 73 79.5
CANSAT78G0649 Cannabis sativa HOM05D006437 ORTHO05D007973 3.9e-29 131.0 73 80.8
MELO3C020290.2 Cucumis melo HOM05D006437 ORTHO05D007973 3.9e-29 131.0 73 79.5
Lj6g0018768 Lotus japonicus HOM05D006437 ORTHO05D007973 3.9e-29 131.0 73 80.8
Lsat_1_v5_gn_2_81461 Lactuca sativa HOM05D006437 ORTHO05D007973 5.1e-29 130.6 75 78.7
PGR042G3666 Punica granatum HOM05D006437 ORTHO05D007973 5.1e-29 130.6 73 78.1
Zm00001eb158640 Zea mays HOM05D006437 ORTHO05D007973 5.1e-29 130.6 75 77.3
Ciclev10013249m.g Citrus clementina HOM05D006437 ORTHO05D007973 6.7e-29 130.2 73 79.5
ClCG05G010950 Citrullus lanatus HOM05D006437 ORTHO05D007973 8.8e-29 129.8 73 78.1
Cc07_g08170 Coffea canephora HOM05D006437 ORTHO05D007973 8.8e-29 129.8 74 78.4
ECA238G0319 Erigeron canadensis HOM05D006437 ORTHO05D007973 8.8e-29 129.8 75 74.7
Medtr3g067715 Medicago truncatula HOM05D006437 ORTHO05D007973 1.1e-28 129.4 73 75.3
Os01g0644200 Oryza sativa ssp. japonica HOM05D006437 ORTHO05D007973 1.1e-28 129.4 75 74.7
Thecc.04G121100 Theobroma cacao HOM05D006437 ORTHO05D007973 1.1e-28 129.4 73 79.5
Nn3g18216 Nelumbo nucifera HOM05D006437 ORTHO05D007973 1.5e-28 129.0 73 78.1
Cpa.g.sc604.3 Carica papaya HOM05D006437 ORTHO05D007973 2.0e-28 128.6 73 78.1
Medtr3g067720 Medicago truncatula HOM05D006437 ORTHO05D007973 3.3e-28 127.9 73 74.0
GSVIVG01030860001 Vitis vinifera HOM05D006437 ORTHO05D007973 5.7e-28 127.1 72 80.6
AUR62023238 Chenopodium quinoa HOM05D006437 ORTHO05D007973 7.4e-28 126.7 75 70.7
CiPaw.03G068600 Carya illinoinensis HOM05D006437 ORTHO05D007973 1.3e-27 125.9 73 76.7
TAR371G0259 Trochodendron aralioides HOM05D006437 ORTHO05D007973 1.3e-27 125.9 73 76.7
CSS0019264 Camellia sinensis var. sinensis HOM05D006437 ORTHO05D007973 1.7e-27 125.6 73 75.3
Sed0002962 Sechium edule HOM05D006437 ORTHO05D007973 1.7e-27 125.6 73 75.3
Cfa007843 Carpinus fangiana HOM05D006437 ORTHO05D007973 2.2e-27 125.2 73 78.1
AUR62023191 Chenopodium quinoa HOM05D006437 ORTHO05D007973 2.8e-27 124.8 75 69.3
Hma1.2p1_0832F.1_g225650 Hydrangea macrophylla HOM05D006437 ORTHO05D007973 2.8e-27 124.8 72 73.6
Aa31LG5G13890 Aethionema arabicum HOM05D006437 ORTHO05D007973 3.7e-27 124.4 72 76.4
Lalb_Chr10g0104501 Lupinus albus HOM05D006437 ORTHO05D007973 3.7e-27 124.4 74 75.7
PSO017G0604 Papaver somniferum HOM05D006437 ORTHO05D007973 3.7e-27 124.4 73 68.5
PSO478G4394 Papaver somniferum HOM05D006437 ORTHO05D007973 3.7e-27 124.4 73 68.5
Potri.017G128600 Populus trichocarpa HOM05D006437 ORTHO05D007973 4.8e-27 124.0 73 75.3
TAR371G1269 Trochodendron aralioides HOM05D006437 ORTHO05D007973 6.3e-27 123.6 72 76.4
BcaC05g30279 Brassica carinata HOM05D006437 ORTHO05D007973 1.1e-26 122.9 72 75.0
EL10Ac2g04484 Beta vulgaris HOM05D006437 ORTHO05D007973 1.4e-26 122.5 73 69.9
CSS0043713 Camellia sinensis var. sinensis HOM05D006437 ORTHO05D007973 3.1e-26 121.3 69 78.3
AUR62023192 Chenopodium quinoa HOM05D006437 ORTHO05D007973 4.1e-26 120.9 75 72.0
Dinv19010 Davidia involucrata HOM05D006437 ORTHO05D007973 4.1e-26 120.9 68 77.9
QL11p004106 Quercus lobata HOM05D006437 ORTHO05D007973 4.1e-26 120.9 72 73.6
Thhalv10022211m.g Eutrema salsugineum HOM05D006437 ORTHO05D007973 7.0e-26 120.2 72 73.6
RcHm_v2.0_Chr1g0370661 Rosa chinensis HOM05D006437 ORTHO05D007973 7.0e-26 120.2 75 74.7
AUR62023239 Chenopodium quinoa HOM05D006437 ORTHO05D007973 9.1e-26 119.8 75 70.7
Haze_14223 Corylus avellana HOM05D006437 ORTHO05D007973 9.1e-26 119.8 73 75.3
FAN27G3274 Fragaria x ananassa HOM05D006437 ORTHO05D007973 1.2e-25 119.4 69 76.8
AL3G12980 Arabidopsis lyrata HOM05D006437 ORTHO05D007973 2.0e-25 118.6 72 72.2
AT3G03341 Arabidopsis thaliana HOM05D006437 ORTHO05D007973 2.0e-25 118.6 72 72.2
Carub.0003s0252 Capsella rubella HOM05D006437 ORTHO05D007973 2.0e-25 118.6 72 72.2
CARHR077390 Cardamine hirsuta HOM05D006437 ORTHO05D007973 2.0e-25 118.6 72 72.2
BcaC09g47742 Brassica carinata HOM05D006437 ORTHO05D007973 3.5e-25 117.9 72 70.8
A06p26360 Brassica napus HOM05D006437 ORTHO05D007973 3.5e-25 117.9 72 70.8
BNapus_Darmor_BZH_scaffold_162p00120 Brassica napus HOM05D006437 ORTHO05D007973 3.5e-25 117.9 72 70.8
BNapus_Darmor_BZH_scaffold_78p00110 Brassica napus HOM05D006437 ORTHO05D007973 3.5e-25 117.9 72 70.8
BolC1t05835H Brassica oleracea HOM05D006437 ORTHO05D007973 3.5e-25 117.9 72 70.8
Aqoxy7G00638 Aquilegia oxysepala HOM05D006437 ORTHO05D007973 4.5e-25 117.5 71 69.0
FAN15G1984 Fragaria x ananassa HOM05D006437 ORTHO05D007973 4.5e-25 117.5 69 75.4
Sp3g02370 Schrenkiella parvula HOM05D006437 ORTHO05D007973 4.5e-25 117.5 72 70.8
FvH4_5g32381 Fragaria vesca HOM05D006437 ORTHO05D007973 5.9e-25 117.1 66 80.3
BcaC04g18789 Brassica carinata HOM05D006437 ORTHO05D007973 1.7e-24 115.5 71 69.0
BcaC09g47741 Brassica carinata HOM05D006437 ORTHO05D007973 2.2e-24 115.2 72 69.4
Pp3c24_9690 Physcomitrium patens HOM05D006437 ORTHO05D007973 2.2e-24 115.2 72 66.7
THA.LOC104820840 Tarenaya hassleriana HOM05D006437 ORTHO05D007973 2.9e-24 114.8 72 68.1
DCAR_015248 Daucus carota HOM05D006437 ORTHO05D007973 3.8e-24 114.4 70 70.0
BraA01t04584Z Brassica rapa HOM05D006437 ORTHO05D007973 5.0e-24 114.0 72 69.4
CsaV3_1G027840 Cucumis sativus L. HOM05D006437 ORTHO05D007973 6.5e-24 113.6 66 71.2
CsaV3_3G021640 Cucumis sativus L. HOM05D006437 ORTHO05D007973 6.5e-24 113.6 66 71.2
FAN20G1691 Fragaria x ananassa HOM05D006874 ORTHO05D008334 8.5e-24 113.2 62 79.0
CARHR195740 Cardamine hirsuta HOM05D006437 ORTHO05D007973 1.4e-23 112.5 71 67.6
Thhalv10015148m.g Eutrema salsugineum HOM05D006437 ORTHO05D007973 1.4e-23 112.5 71 66.2
Mapoly0046s0059 Marchantia polymorpha HOM05D006437 ORTHO05D007973 1.9e-23 112.1 75 62.7
AL6G28540 Arabidopsis lyrata HOM05D006437 ORTHO05D007973 2.5e-23 111.7 71 69.0
Carub.0006s1569 Capsella rubella HOM05D006437 ORTHO05D007973 3.2e-23 111.3 71 67.6
Pp3c8_12730 Physcomitrium patens HOM05D006437 ORTHO05D007973 4.2e-23 110.9 72 65.3
Pp3c8_12731 Physcomitrium patens HOM05D006437 ORTHO05D007973 4.2e-23 110.9 72 65.3
Peaxi162Scf00118g00018 Petunia axillaris HOM05D006437 ORTHO05D007973 5.5e-23 110.5 61 82.0
Mapoly0046s0058 Marchantia polymorpha HOM05D006437 ORTHO05D007973 7.2e-23 110.2 75 65.3
AL288U10020 Arabidopsis lyrata HOM05D006437 ORTHO05D007973 9.4e-23 109.8 72 69.4
SMO111G0099 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 9.4e-23 109.8 72 66.7
MELO3C020291.2 Cucumis melo HOM05D006437 ORTHO05D007973 1.2e-22 109.4 73 69.9
A10p21920 Brassica napus HOM05D006437 ORTHO05D007973 2.7e-22 108.2 67 68.7
Prupe.3G158900 Prunus persica HOM05D006437 ORTHO05D007973 3.6e-22 107.8 66 72.7
C09p59670 Brassica napus HOM05D006437 ORTHO05D007973 4.7e-22 107.5 66 69.7
BolC9t58806H Brassica oleracea HOM05D006437 ORTHO05D007973 4.7e-22 107.5 66 69.7
BraA10t44251Z Brassica rapa HOM05D006437 ORTHO05D007973 4.7e-22 107.5 66 69.7
PSO017G3771 Papaver somniferum HOM05D006437 ORTHO05D007973 2.3e-21 105.1 69 62.3
PSO478G0303 Papaver somniferum HOM05D006437 ORTHO05D007973 2.3e-21 105.1 69 62.3
BcaB08g36768 Brassica carinata HOM05D002536 ORTHO05D007973 3.9e-21 104.4 66 68.2
Pp3c4_12160 Physcomitrium patens HOM05D006437 ORTHO05D007973 3.9e-21 104.4 72 58.3
SMO111G0160 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 2.0e-20 102.1 72 63.9
SMO111G0173 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 2.0e-20 102.1 72 63.9
SMO293G0011 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 2.0e-20 102.1 72 63.9
Pp3c23_9530 Physcomitrium patens HOM05D006437 ORTHO05D007973 4.4e-20 100.9 72 59.7
Pp3c19_5460 Physcomitrium patens HOM05D006437 ORTHO05D007973 7.4e-20 100.1 72 59.7
Pp3c19_5500 Physcomitrium patens HOM05D006437 ORTHO05D007973 7.4e-20 100.1 72 59.7
Pp3c19_9840 Physcomitrium patens HOM05D006437 ORTHO05D007973 9.7e-20 99.8 72 58.3
SMO111G0149 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 1.3e-19 99.4 72 61.1
Pp3c21_13210 Physcomitrium patens HOM05D006437 ORTHO05D007973 1.7e-19 99.0 72 58.3
SEGI_27045 Sequoiadendron giganteum HOM05D006437 ORTHO05D007973 4.1e-18 94.4 69 62.3
Aqoxy7G00636 Aquilegia oxysepala HOM05D006437 ORTHO05D007973 1.2e-17 92.8 61 63.9
Rhsim08G0086000 Rhododendron simsii HOM05D006437 ORTHO05D007973 1.6e-17 92.4 63 66.7
SEGI_20637 Sequoiadendron giganteum HOM05D006437 ORTHO05D007973 1.6e-17 92.4 69 60.9
Mapoly0009s0147 Marchantia polymorpha HOM05D006437 ORTHO05D007973 4.5e-17 90.9 70 52.9
TAR371G0835 Trochodendron aralioides HOM05D006437 ORTHO05D007973 8.5e-16 86.7 49 75.5
SEGI_23307 Sequoiadendron giganteum HOM05D006437 ORTHO05D007973 1.1e-15 86.3 58 69.0
TAR371G0317 Trochodendron aralioides HOM05D006437 ORTHO05D007973 2.7e-14 81.6 46 76.1
Cre13.g575701 Chlamydomonas reinhardtii HOM05D006437 ORTHO05D007973 7.7e-09 63.5 70 47.1
Cre03.g207152 Chlamydomonas reinhardtii HOM05D006437 ORTHO05D007973 4.2e-07 57.8 71 46.5
Cre03.g207100 Chlamydomonas reinhardtii HOM05D006437 ORTHO05D007973 7.2e-07 57.0 71 40.8


User provided reference genes

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