Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.02G073100 Manihot esculenta HOM05D007637 ORTHO05D009508 1.5e-65 252.7 129 100.0
Thecc.04G125100 Theobroma cacao HOM05D007637 ORTHO05D009508 2.8e-27 125.6 125 52.8
Duzib133G0287 Durio zibethinus HOM05D007637 ORTHO05D009508 2.3e-21 105.9 125 46.4
Gohir.A07G175550 Gossypium hirsutum HOM05D007637 ORTHO05D009508 4.0e-21 105.1 127 48.8
Gohir.D07G182150 Gossypium hirsutum HOM05D007637 ORTHO05D009508 5.2e-21 104.8 127 49.6
Gorai.001G203000 Gossypium raimondii HOM05D007637 ORTHO05D009508 5.2e-21 104.8 127 49.6
GSVIVG01030920001 Vitis vinifera HOM05D007637 ORTHO05D009508 5.2e-21 104.8 125 49.6
Gohir.A07G075400 Gossypium hirsutum HOM05D007637 ORTHO05D009508 7.5e-20 100.9 128 43.8
Ciclev10013623m.g Citrus clementina HOM05D007637 ORTHO05D009508 2.9e-19 99.0 129 45.7
CSS0034381 Camellia sinensis var. sinensis HOM05D007637 ORTHO05D009508 6.4e-19 97.8 123 47.2
GSVIVG01030917001 Vitis vinifera HOM05D007637 ORTHO05D009508 1.4e-18 96.7 125 45.6
Gohir.D07G079900 Gossypium hirsutum HOM05D007637 ORTHO05D009508 1.8e-18 96.3 126 42.9
Gorai.001G084700 Gossypium raimondii HOM05D007637 ORTHO05D009508 1.8e-18 96.3 126 42.9
Manes.02G073000 Manihot esculenta HOM05D007637 ORTHO05D009508 1.8e-18 96.3 127 48.0
Dinv14862 Davidia involucrata HOM05D007637 ORTHO05D009508 3.2e-18 95.5 125 45.6
Potri.017G122100 Populus trichocarpa HOM05D007637 ORTHO05D009508 4.1e-18 95.1 128 46.9
GSVIVG01030918001 Vitis vinifera HOM05D007637 ORTHO05D009508 4.1e-18 95.1 125 44.8
CiPaw.04G044900 Carya illinoinensis HOM05D007637 ORTHO05D009508 1.2e-17 93.6 124 42.7
Hma1.2p1_0283F.1_g113660 Hydrangea macrophylla HOM05D007637 ORTHO05D009508 1.2e-17 93.6 121 47.1
Cpa.g.sc116.6 Carica papaya HOM05D007637 ORTHO05D009508 2.7e-17 92.4 132 45.5
Sabra04G0062800 Salix brachista HOM05D007637 ORTHO05D009508 2.7e-17 92.4 128 46.1
Manes.01G114400 Manihot esculenta HOM05D007637 ORTHO05D009508 3.5e-17 92.0 123 48.0
Lj1g0007116 Lotus japonicus HOM05D007637 ORTHO05D009508 5.9e-17 91.3 90 51.1
Dinv33980 Davidia involucrata HOM05D007637 ORTHO05D009508 7.8e-17 90.9 111 45.9
Cfa007872 Carpinus fangiana HOM05D007637 ORTHO05D009508 6.6e-16 87.8 124 42.7
Medtr7g082920 Medicago truncatula HOM05D007637 ORTHO05D009508 1.1e-15 87.0 91 44.0
Psat3g096920 Pisum sativum HOM05D007637 ORTHO05D009508 2.5e-15 85.9 103 44.7
Glyma.02G090700 Glycine max HOM05D007637 ORTHO05D009508 5.6e-15 84.7 132 38.6
Oeu047428.1 Olea europaea HOM05D007637 ORTHO05D009508 9.5e-15 84.0 127 37.8
TPR.G28401 Trifolium pratense HOM05D007637 ORTHO05D009508 1.2e-14 83.6 87 46.0
TAR374G0670 Trochodendron aralioides HOM05D007637 ORTHO05D009508 1.2e-14 83.6 125 39.2
TAR629G1467 Trochodendron aralioides HOM05D007637 ORTHO05D009508 1.2e-14 83.6 125 41.6
Glyma.18G292400 Glycine max HOM05D007637 ORTHO05D009508 3.6e-14 82.0 88 45.5
MD09G1259200 Malus domestica HOM05D007637 ORTHO05D009508 8.0e-14 80.9 118 39.8
MD09G1259400 Malus domestica HOM05D007637 ORTHO05D009508 8.0e-14 80.9 131 38.9
Haze_14202 Corylus avellana HOM05D007637 ORTHO05D009508 1.1e-13 80.5 108 40.7
Eucgr.J01537 Eucalyptus grandis HOM05D007637 ORTHO05D009508 1.4e-13 80.1 130 43.1
Rhsim10G0078000 Rhododendron simsii HOM05D007637 ORTHO05D009508 3.1e-13 79.0 125 40.8
Atru.chr1.1552 Acer truncatum HOM05D007637 ORTHO05D009508 4.0e-13 78.6 127 40.9
Dinv16187 Davidia involucrata HOM05D007637 ORTHO05D009508 4.0e-13 78.6 127 38.6
Actinidia36353 Actinidia chinensis HOM05D007637 ORTHO05D009508 5.2e-13 78.2 119 42.0
Eucgr.J01536 Eucalyptus grandis HOM05D007637 ORTHO05D009508 5.2e-13 78.2 130 42.3
DCAR_010721 Daucus carota HOM05D007637 ORTHO05D009508 6.8e-13 77.8 129 41.1
Rhsim10G0078100 Rhododendron simsii HOM05D007637 ORTHO05D009508 6.8e-13 77.8 120 41.7
PGR042G0465 Punica granatum HOM05D007637 ORTHO05D009508 1.2e-12 77.0 126 40.5
TAR622G1280 Trochodendron aralioides HOM05D007637 ORTHO05D009508 5.8e-12 74.7 101 42.6
VMungo1383G3686 Vigna mungo HOM05D007637 ORTHO05D009508 5.8e-12 74.7 83 47.0
Phvul.008G009500 Phaseolus vulgaris HOM05D007637 ORTHO05D009508 7.5e-12 74.3 124 33.9
Prupe.3G151000 Prunus persica HOM05D007637 ORTHO05D009508 7.5e-12 74.3 104 41.3
SalBow3G1214 Salvia bowleyana HOM05D007637 ORTHO05D009508 7.5e-12 74.3 127 36.2
SalBow3G3066 Salvia bowleyana HOM05D007637 ORTHO05D009508 7.5e-12 74.3 127 36.2
ATR0326G042 Amborella trichopoda HOM05D007637 ORTHO05D009508 1.3e-11 73.6 127 40.2
MBI10_g37696_MAGBIO Magnolia biondii HOM05D007637 ORTHO05D009508 2.2e-11 72.8 126 43.7
Nitab4.5_0005700g0020 Nicotiana tabacum HOM05D007637 ORTHO05D009508 2.9e-11 72.4 94 40.4
Gohir.D07G182500 Gossypium hirsutum HOM05D007637 ORTHO05D009508 4.9e-11 71.6 126 41.3
Eucgr.J01538 Eucalyptus grandis HOM05D007637 ORTHO05D009508 6.4e-11 71.2 129 41.9
Thecc.04G124800 Theobroma cacao HOM05D007637 ORTHO05D009508 6.4e-11 71.2 100 46.0
Solyc02g091193.1 Solanum lycopersicum HOM05D007637 ORTHO05D009508 8.3e-11 70.9 90 43.3
PGSC0003DMG400030637 Solanum tuberosum HOM05D007637 ORTHO05D009508 8.3e-11 70.9 101 41.6
Lalb_Chr17g0336081 Lupinus albus HOM05D007637 ORTHO05D009508 2.4e-10 69.3 87 43.7
Gorai.001G203100 Gossypium raimondii HOM05D007637 ORTHO05D009508 3.2e-10 68.9 126 39.7
Manes.06G062300 Manihot esculenta HOM05D007637 ORTHO05D009508 3.2e-10 68.9 123 42.3
TWI74G0234 Tripterygium wilfordii HOM05D007637 ORTHO05D009508 4.1e-10 68.6 134 40.3
Oeu007437.1 Olea europaea HOM05D007637 ORTHO05D009508 5.4e-10 68.2 125 36.0
arahy.Tifrunner.gnm1.ann1.AC9JIC Arachis hypogaea HOM05D007637 ORTHO05D009508 9.2e-10 67.4 92 38.0
arahy.Tifrunner.gnm1.ann1.BY2X14 Arachis hypogaea HOM05D007637 ORTHO05D009508 9.2e-10 67.4 92 38.0
Manes.14G136000 Manihot esculenta HOM05D007637 ORTHO05D009508 9.2e-10 67.4 123 38.2
QL02p049171 Quercus lobata HOM05D007637 ORTHO05D009508 1.2e-09 67.0 67 49.3
Lalb_Chr17g0336031 Lupinus albus HOM05D007637 ORTHO05D009508 3.5e-09 65.5 89 42.7
Sed0013286 Sechium edule HOM05D007637 ORTHO05D009508 1.0e-08 63.9 107 37.4
Potri.010G115900 Populus trichocarpa HOM05D007637 ORTHO05D009508 2.3e-08 62.8 98 36.7
Rhsim09G0068300 Rhododendron simsii HOM05D007637 ORTHO05D009508 3.0e-08 62.4 91 40.7
HanXRQChr09g0262411 Helianthus annuus HOM05D007637 ORTHO05D009508 5.0e-08 61.6 128 34.4
Ciclev10017462m.g Citrus clementina HOM05D007637 ORTHO05D009508 6.6e-08 61.2 128 32.0
Sabra10G0085700 Salix brachista HOM05D004972 ORTHO05D006309 8.6e-08 60.8 88 38.6
Sabra10G0087400 Salix brachista HOM05D004972 ORTHO05D006309 8.6e-08 60.8 88 38.6
TWI79G1694 Tripterygium wilfordii HOM05D007637 ORTHO05D009508 1.1e-07 60.5 127 32.3
Actinidia15914 Actinidia chinensis HOM05D007637 ORTHO05D009508 2.5e-07 59.3 107 41.1
COL.COLO4_38443 Corchorus olitorius HOM05D007637 ORTHO05D009508 2.5e-07 59.3 103 42.7
Eucgr.G02214 Eucalyptus grandis HOM05D007637 ORTHO05D009508 3.3e-07 58.9 92 40.2
Actinidia31983 Actinidia chinensis HOM05D007637 ORTHO05D009508 1.2e-06 57.0 83 43.4
Lsat_1_v5_gn_4_155320 Lactuca sativa HOM05D007637 ORTHO05D009508 2.1e-06 56.2 102 34.3
Actinidia33410 Actinidia chinensis HOM05D007637 ORTHO05D009508 6.2e-06 54.7 97 39.2
HanXRQChr09g0262421 Helianthus annuus HOM05D007637 ORTHO05D009508 8.1e-06 54.3 129 31.0


User provided reference genes

Program Settings