Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.02G073000 Manihot esculenta HOM05D007637 ORTHO05D009508 4.1e-63 244.6 126 100.0
Manes.01G114400 Manihot esculenta HOM05D007637 ORTHO05D009508 3.6e-35 151.8 125 67.2
Thecc.04G125100 Theobroma cacao HOM05D007637 ORTHO05D009508 1.3e-29 133.3 126 57.9
CiPaw.04G044900 Carya illinoinensis HOM05D007637 ORTHO05D009508 7.3e-28 127.5 126 53.2
Potri.017G122100 Populus trichocarpa HOM05D007637 ORTHO05D009508 1.4e-26 123.2 128 57.8
Gohir.D07G182150 Gossypium hirsutum HOM05D007637 ORTHO05D009508 1.8e-26 122.9 127 53.5
Gorai.001G203000 Gossypium raimondii HOM05D007637 ORTHO05D009508 1.8e-26 122.9 127 53.5
Duzib133G0287 Durio zibethinus HOM05D007637 ORTHO05D009508 1.5e-25 119.8 126 54.8
Gohir.A07G175550 Gossypium hirsutum HOM05D007637 ORTHO05D009508 1.5e-25 119.8 127 52.8
Ciclev10013623m.g Citrus clementina HOM05D007637 ORTHO05D009508 2.0e-25 119.4 130 51.5
GSVIVG01030920001 Vitis vinifera HOM05D007637 ORTHO05D009508 3.4e-25 118.6 126 53.2
GSVIVG01030917001 Vitis vinifera HOM05D007637 ORTHO05D009508 4.4e-25 118.2 126 54.8
DCAR_010721 Daucus carota HOM05D007637 ORTHO05D009508 7.6e-25 117.5 99 58.6
Dinv14862 Davidia involucrata HOM05D007637 ORTHO05D009508 7.6e-25 117.5 127 53.5
GSVIVG01030918001 Vitis vinifera HOM05D007637 ORTHO05D009508 1.3e-24 116.7 126 54.0
Hma1.2p1_0283F.1_g113660 Hydrangea macrophylla HOM05D007637 ORTHO05D009508 2.2e-24 115.9 125 51.2
Sabra04G0062800 Salix brachista HOM05D007637 ORTHO05D009508 1.1e-23 113.6 132 53.8
Gohir.A07G075400 Gossypium hirsutum HOM05D007637 ORTHO05D009508 2.4e-23 112.5 127 51.2
Gohir.D07G079900 Gossypium hirsutum HOM05D007637 ORTHO05D009508 1.2e-22 110.2 127 51.2
Gorai.001G084700 Gossypium raimondii HOM05D007637 ORTHO05D009508 1.2e-22 110.2 127 51.2
Cfa007872 Carpinus fangiana HOM05D007637 ORTHO05D009508 2.1e-22 109.4 126 50.8
Actinidia36353 Actinidia chinensis HOM05D007637 ORTHO05D009508 7.8e-22 107.5 105 55.2
Medtr7g082920 Medicago truncatula HOM05D007637 ORTHO05D009508 1.0e-21 107.1 127 49.6
TAR629G1467 Trochodendron aralioides HOM05D007637 ORTHO05D009508 1.7e-21 106.3 126 50.8
TAR374G0670 Trochodendron aralioides HOM05D007637 ORTHO05D009508 2.3e-21 105.9 126 50.0
CSS0034381 Camellia sinensis var. sinensis HOM05D007637 ORTHO05D009508 3.9e-21 105.1 126 51.6
Lj1g0007116 Lotus japonicus HOM05D007637 ORTHO05D009508 5.1e-21 104.8 109 51.4
Manes.14G136000 Manihot esculenta HOM05D007637 ORTHO05D009508 5.1e-21 104.8 123 45.5
Manes.06G062300 Manihot esculenta HOM05D007637 ORTHO05D009508 6.6e-21 104.4 123 47.2
MD09G1259400 Malus domestica HOM05D007637 ORTHO05D009508 2.5e-20 102.4 128 46.9
TPR.G28401 Trifolium pratense HOM05D007637 ORTHO05D009508 5.6e-20 101.3 127 48.0
PGR042G0465 Punica granatum HOM05D007637 ORTHO05D009508 9.6e-20 100.5 99 50.5
Gohir.D07G182500 Gossypium hirsutum HOM05D007637 ORTHO05D009508 4.8e-19 98.2 125 48.0
Oeu047428.1 Olea europaea HOM05D007637 ORTHO05D009508 6.2e-19 97.8 113 46.0
Eucgr.J01536 Eucalyptus grandis HOM05D007637 ORTHO05D009508 8.1e-19 97.4 131 45.8
Dinv33980 Davidia involucrata HOM05D007637 ORTHO05D009508 2.4e-18 95.9 112 52.7
Gorai.001G203100 Gossypium raimondii HOM05D007637 ORTHO05D009508 3.1e-18 95.5 124 46.0
Prupe.3G151000 Prunus persica HOM05D007637 ORTHO05D009508 3.1e-18 95.5 131 44.3
Rhsim10G0078000 Rhododendron simsii HOM05D007637 ORTHO05D009508 3.1e-18 95.5 128 46.1
Manes.02G073100 Manihot esculenta HOM05D007637 ORTHO05D009508 5.3e-18 94.7 127 48.0
Thecc.04G124800 Theobroma cacao HOM05D007637 ORTHO05D009508 6.9e-18 94.4 95 56.8
Potri.010G115900 Populus trichocarpa HOM05D007637 ORTHO05D009508 9.0e-18 94.0 128 40.6
Sed0013286 Sechium edule HOM05D007637 ORTHO05D009508 1.2e-17 93.6 122 43.4
Psat3g096920 Pisum sativum HOM05D007637 ORTHO05D009508 2.0e-17 92.8 128 46.1
Cpa.g.sc116.6 Carica papaya HOM05D007637 ORTHO05D009508 5.8e-17 91.3 131 46.6
Dinv16187 Davidia involucrata HOM05D007637 ORTHO05D009508 5.8e-17 91.3 123 43.1
MBI10_g37696_MAGBIO Magnolia biondii HOM05D007637 ORTHO05D009508 1.3e-16 90.1 111 46.8
MD09G1259200 Malus domestica HOM05D007637 ORTHO05D009508 1.3e-16 90.1 126 46.0
Rhsim10G0078100 Rhododendron simsii HOM05D007637 ORTHO05D009508 2.2e-16 89.4 112 48.2
Oeu007437.1 Olea europaea HOM05D007637 ORTHO05D009508 2.9e-16 89.0 99 46.5
Phvul.008G009500 Phaseolus vulgaris HOM05D007637 ORTHO05D009508 6.4e-16 87.8 123 42.3
Atru.chr1.1552 Acer truncatum HOM05D007637 ORTHO05D009508 8.4e-16 87.4 119 48.7
COL.COLO4_38443 Corchorus olitorius HOM05D007637 ORTHO05D009508 8.4e-16 87.4 102 57.8
Eucgr.J01538 Eucalyptus grandis HOM05D007637 ORTHO05D009508 1.1e-15 87.0 131 42.7
Eucgr.J01537 Eucalyptus grandis HOM05D007637 ORTHO05D009508 1.4e-15 86.7 130 44.6
Glyma.02G090700 Glycine max HOM05D007637 ORTHO05D009508 1.4e-15 86.7 129 41.9
TAR622G1280 Trochodendron aralioides HOM05D007637 ORTHO05D009508 1.4e-15 86.7 101 49.5
Solyc02g091193.1 Solanum lycopersicum HOM05D007637 ORTHO05D009508 1.9e-15 86.3 117 44.4
Glyma.18G292400 Glycine max HOM05D007637 ORTHO05D009508 2.4e-15 85.9 103 43.7
Sabra10G0085700 Salix brachista HOM05D004972 ORTHO05D006309 2.4e-15 85.9 110 42.7
Sabra10G0087400 Salix brachista HOM05D004972 ORTHO05D006309 2.4e-15 85.9 110 42.7
Haze_14202 Corylus avellana HOM05D007637 ORTHO05D009508 4.2e-15 85.1 90 51.1
PGSC0003DMG400030637 Solanum tuberosum HOM05D007637 ORTHO05D009508 4.2e-15 85.1 123 44.7
Lalb_Chr17g0336081 Lupinus albus HOM05D007637 ORTHO05D009508 5.4e-15 84.7 99 43.4
Lalb_Chr17g0336031 Lupinus albus HOM05D007637 ORTHO05D009508 7.9e-14 80.9 101 42.6
TWI74G0234 Tripterygium wilfordii HOM05D007637 ORTHO05D009508 1.3e-13 80.1 104 48.1
Nitab4.5_0005700g0020 Nicotiana tabacum HOM05D007637 ORTHO05D009508 2.3e-13 79.3 112 42.9
SalBow3G1214 Salvia bowleyana HOM05D007637 ORTHO05D009508 2.3e-13 79.3 106 48.1
SalBow3G3066 Salvia bowleyana HOM05D007637 ORTHO05D009508 2.3e-13 79.3 106 48.1
Nitab4.5_0002456g0080 Nicotiana tabacum HOM05D007637 ORTHO05D009508 5.1e-13 78.2 99 46.5
QL01p002403 Quercus lobata HOM05D006556 ORTHO05D008146 6.6e-13 77.8 78 52.6
HanXRQChr09g0262411 Helianthus annuus HOM05D007637 ORTHO05D009508 1.1e-12 77.0 126 37.3
ATR0326G042 Amborella trichopoda HOM05D007637 ORTHO05D009508 1.5e-12 76.6 98 43.9
arahy.Tifrunner.gnm1.ann1.AC9JIC Arachis hypogaea HOM05D007637 ORTHO05D009508 1.9e-12 76.3 92 46.7
arahy.Tifrunner.gnm1.ann1.BY2X14 Arachis hypogaea HOM05D007637 ORTHO05D009508 1.9e-12 76.3 92 46.7
Actinidia31983 Actinidia chinensis HOM05D007637 ORTHO05D009508 2.5e-12 75.9 85 52.9
TWI79G1694 Tripterygium wilfordii HOM05D007637 ORTHO05D009508 4.3e-12 75.1 125 36.0
Ciclev10017462m.g Citrus clementina HOM05D007637 ORTHO05D009508 9.6e-12 73.9 98 43.9
VMungo1383G3686 Vigna mungo HOM05D007637 ORTHO05D009508 9.6e-12 73.9 96 42.7
Rhsim09G0068300 Rhododendron simsii HOM05D007637 ORTHO05D009508 2.8e-11 72.4 103 43.7
Actinidia33410 Actinidia chinensis HOM05D007637 ORTHO05D009508 8.1e-11 70.9 106 44.3
Actinidia15914 Actinidia chinensis HOM05D007637 ORTHO05D009508 1.1e-10 70.5 109 43.1
CiPaw.05G246900 Carya illinoinensis HOM05D007637 ORTHO05D009508 5.3e-10 68.2 99 39.4
Lsat_1_v5_gn_4_155320 Lactuca sativa HOM05D007637 ORTHO05D009508 5.3e-10 68.2 99 38.4
PGSC0003DMG400010395 Solanum tuberosum HOM05D007637 ORTHO05D009508 3.4e-09 65.5 105 41.0
Eucgr.G02214 Eucalyptus grandis HOM05D007637 ORTHO05D009508 7.6e-09 64.3 92 41.3
Nitab4.5_0002644g0060 Nicotiana tabacum HOM05D007637 ORTHO05D009508 2.9e-08 62.4 74 50.0
QL02p049171 Quercus lobata HOM05D007637 ORTHO05D009508 3.8e-08 62.0 50 54.0
HanXRQChr09g0262421 Helianthus annuus HOM05D007637 ORTHO05D009508 4.9e-08 61.6 98 34.7
Phvul.007G035600 Phaseolus vulgaris HOM05D007637 ORTHO05D009508 6.4e-08 61.2 100 35.0
Solyc04g007585.1 Solanum lycopersicum HOM05D007637 ORTHO05D009508 1.1e-07 60.5 99 37.4
Glyma.10G266100 Glycine max HOM05D007637 ORTHO05D009508 1.9e-07 59.7 96 37.5
Nitab4.5_0002456g0100 Nicotiana tabacum HOM05D007637 ORTHO05D009508 5.5e-07 58.2 65 47.7
Glyma.20G124500 Glycine max HOM05D007637 ORTHO05D009508 7.1e-07 57.8 97 37.1
HanXRQChr11g0325281 Helianthus annuus HOM05D007637 ORTHO05D009508 1.6e-06 56.6 124 34.7


User provided reference genes

Program Settings