Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.02G068900 Manihot esculenta HOM05D006950 ORTHO05D008798 8.2e-199 696.8 343 100.0
Ciclev10012146m.g Citrus clementina HOM05D006950 ORTHO05D008798 1.5e-155 553.1 327 80.7
Potri.004G099300 Populus trichocarpa HOM05D006950 ORTHO05D008798 4.3e-155 551.6 344 78.8
TWI53G1811 Tripterygium wilfordii HOM05D006950 ORTHO05D008798 2.3e-153 545.8 343 76.7
CiPaw.04G042300 Carya illinoinensis HOM05D006950 ORTHO05D008798 7.1e-150 534.3 338 75.4
MD17G1244700 Malus domestica HOM05D006950 ORTHO05D008798 2.5e-147 525.8 337 74.5
Atru.chr1.1690 Acer truncatum HOM05D006950 ORTHO05D008798 3.3e-147 525.4 326 77.9
Prupe.3G142000 Prunus persica HOM05D006950 ORTHO05D008798 2.8e-146 522.3 343 72.9
Haze_14155 Corylus avellana HOM05D006950 ORTHO05D008798 3.6e-146 521.9 337 74.8
Dinv33949 Davidia involucrata HOM05D006950 ORTHO05D008798 2.4e-145 519.2 340 74.1
GSVIVG01031019001 Vitis vinifera HOM05D006950 ORTHO05D008798 3.1e-145 518.8 330 75.5
Thecc.04G133400 Theobroma cacao HOM05D006950 ORTHO05D008798 8.9e-145 517.3 330 76.1
CANSAT78G2296 Cannabis sativa HOM05D006950 ORTHO05D008798 2.6e-144 515.8 339 74.0
Gorai.007G181600 Gossypium raimondii HOM05D006950 ORTHO05D008798 2.6e-144 515.8 327 76.1
Gohir.A11G163600 Gossypium hirsutum HOM05D006950 ORTHO05D008798 3.4e-144 515.4 327 75.5
Actinidia36323 Actinidia chinensis HOM05D006950 ORTHO05D008798 2.9e-143 512.3 339 72.6
Gohir.D11G169900 Gossypium hirsutum HOM05D006950 ORTHO05D008798 1.1e-142 510.4 327 75.2
TAR629G2916 Trochodendron aralioides HOM05D006950 ORTHO05D008798 2.4e-142 509.2 336 72.9
Cpa.g.sc282.6 Carica papaya HOM05D006950 ORTHO05D008798 2.1e-141 506.1 346 72.0
vmacro05553 Vaccinium macrocarpon HOM05D006950 ORTHO05D008798 3.5e-141 505.4 342 71.3
Nitab4.5_0000912g0220 Nicotiana tabacum HOM05D006950 ORTHO05D008798 8.7e-140 500.7 344 69.5
Nitab4.5_0000659g0020 Nicotiana tabacum HOM05D006950 ORTHO05D008798 1.2e-138 496.9 344 69.5
Cc07_g08790 Coffea canephora HOM05D006950 ORTHO05D008798 1.8e-137 493.0 323 73.1
Peaxi162Scf00394g00061 Petunia axillaris HOM05D006950 ORTHO05D008798 3.1e-137 492.3 340 69.4
PGR142G3639 Punica granatum HOM05D006950 ORTHO05D008798 4.4e-136 488.4 319 73.7
Lj4A191T50 Lonicera japonica HOM05D006950 ORTHO05D008798 5.8e-136 488.0 343 70.6
Oeu007452.1 Olea europaea HOM05D006950 ORTHO05D008798 7.6e-136 487.6 327 71.6
Hma1.2p1_0136F.1_g062250 Hydrangea macrophylla HOM05D006950 ORTHO05D008798 9.9e-136 487.3 337 69.7
Glyma.18G296400 Glycine max HOM05D006950 ORTHO05D008798 2.9e-135 485.7 327 72.5
Lj1g0016691 Lotus japonicus HOM05D006950 ORTHO05D008798 2.9e-135 485.7 334 72.8
PGSC0003DMG400026406 Solanum tuberosum HOM05D006950 ORTHO05D008798 2.9e-135 485.7 344 68.3
MSTRG.15296 Avicennia marina HOM05D006950 ORTHO05D008798 2.4e-134 482.6 312 74.0
Hund13713 Selenicereus undatus HOM05D006950 ORTHO05D008798 5.4e-134 481.5 345 69.3
Migut.L00319 Erythranthe guttata HOM05D006950 ORTHO05D008798 7.1e-134 481.1 345 69.9
Sed0021084 Sechium edule HOM05D006950 ORTHO05D008798 4.6e-133 478.4 335 67.5
EL10Ac2g04564 Beta vulgaris HOM05D006950 ORTHO05D008798 7.8e-133 477.6 346 68.2
Medtr7g007310 Medicago truncatula HOM05D006950 ORTHO05D008798 2.3e-132 476.1 347 68.9
Phvul.008G006100 Phaseolus vulgaris HOM05D006950 ORTHO05D008798 5.1e-132 474.9 327 70.9
TPR.G9714 Trifolium pratense HOM05D006950 ORTHO05D008798 8.7e-132 474.2 341 68.9
Lalb_Chr17g0335791 Lupinus albus HOM05D006950 ORTHO05D008798 2.5e-131 472.6 321 72.9
Sopen02g030760 Solanum pennellii HOM05D006950 ORTHO05D008798 5.6e-131 471.5 344 66.3
VMungo1383G3190 Vigna mungo HOM05D006950 ORTHO05D008798 5.6e-131 471.5 324 71.3
Nn3g17879 Nelumbo nucifera HOM05D006950 ORTHO05D008798 7.3e-131 471.1 322 69.9
Aqoxy3G00267 Aquilegia oxysepala HOM05D006950 ORTHO05D008798 1.3e-130 470.3 322 70.2
AL7G52300 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 2.1e-130 469.5 343 67.1
arahy.Tifrunner.gnm1.ann1.J0JTFL Arachis hypogaea HOM05D006950 ORTHO05D008798 2.8e-130 469.2 321 70.1
arahy.Tifrunner.gnm1.ann1.QXSY6T Arachis hypogaea HOM05D006950 ORTHO05D008798 2.8e-130 469.2 321 70.1
CAN.G625.25 Capsicum annuum HOM05D006950 ORTHO05D008798 2.8e-130 469.2 344 66.3
ClCG03G006740 Citrullus lanatus HOM05D006950 ORTHO05D008798 2.4e-129 466.1 353 64.6
CsaV3_1G032300 Cucumis sativus L. HOM05D006950 ORTHO05D008798 3.1e-129 465.7 326 68.4
Eucgr.G03073 Eucalyptus grandis HOM05D006950 ORTHO05D008798 3.1e-129 465.7 311 72.3
Thhalv10027821m.g Eutrema salsugineum HOM05D006950 ORTHO05D008798 3.1e-129 465.7 344 66.3
MBI16_g34414_MAGBIO Magnolia biondii HOM05D006950 ORTHO05D008798 1.7e-127 459.9 332 68.4
unitig_0.g2608 Utricularia gibba HOM05D005540 ORTHO05D006932 8.4e-127 457.6 332 68.7
Aa31LG9G17120 Aethionema arabicum HOM05D006950 ORTHO05D008798 1.1e-126 457.2 332 66.9
AL7G52280 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 2.4e-126 456.1 343 66.2
AL7G52430 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 2.4e-126 456.1 343 66.2
ECA246G0391 Erigeron canadensis HOM05D006950 ORTHO05D008798 3.2e-126 455.7 328 67.1
C06p18110 Brassica napus HOM05D006950 ORTHO05D008798 1.2e-125 453.8 330 66.7
BcaC08g44377 Brassica carinata HOM05D006950 ORTHO05D008798 1.0e-124 450.7 330 66.1
THA.LOC104805569 Tarenaya hassleriana HOM05D006950 ORTHO05D008798 1.0e-124 450.7 333 66.4
BolC6t37017H Brassica oleracea HOM05D006950 ORTHO05D008798 1.8e-124 449.9 342 64.9
BraA07t29668Z Brassica rapa HOM05D006950 ORTHO05D008798 3.0e-124 449.1 342 65.2
A07p19680 Brassica napus HOM05D006950 ORTHO05D008798 3.9e-124 448.7 342 65.2
HanXRQChr15g0471491 Helianthus annuus HOM05D006950 ORTHO05D008798 5.6e-123 444.9 324 66.7
AUR62023300 Chenopodium quinoa HOM05D006950 ORTHO05D008798 6.2e-122 441.4 324 67.6
Cfa007922 Carpinus fangiana HOM05D006950 ORTHO05D008798 1.8e-121 439.9 369 61.8
PSO017G6790 Papaver somniferum HOM05D006950 ORTHO05D008798 1.8e-121 439.9 316 66.1
Sc11g0008340 Simmondsia chinensis HOM05D006950 ORTHO05D008798 1.8e-121 439.9 346 65.3
Lsat_1_v5_gn_3_79740 Lactuca sativa HOM05D006950 ORTHO05D008798 7.6e-120 434.5 335 67.5
ATR1125G044 Amborella trichopoda HOM05D006950 ORTHO05D008798 4.9e-119 431.8 317 66.9
CDE06G1236 Ceratophyllum demersum HOM05D006950 ORTHO05D008798 2.5e-118 429.5 312 65.1
Duzib138G1034 Durio zibethinus HOM05D006950 ORTHO05D008798 2.5e-118 429.5 291 73.5
Eucgr.G03074 Eucalyptus grandis HOM05D006950 ORTHO05D008798 1.2e-117 427.2 311 64.3
PSO478G4580 Papaver somniferum HOM05D006950 ORTHO05D008798 1.6e-117 426.8 316 65.5
Psat3g205440 Pisum sativum HOM05D006950 ORTHO05D008798 3.9e-116 422.2 320 65.0
BcaB02g08012 Brassica carinata HOM05D006950 ORTHO05D008798 6.9e-113 411.4 315 65.1
Sp7g03690 Schrenkiella parvula HOM05D006950 ORTHO05D008798 2.6e-112 409.5 289 68.2
Carub.0007s3770 Capsella rubella HOM05D006950 ORTHO05D008798 1.1e-110 404.1 289 67.1
COL.COLO4_09336 Corchorus olitorius HOM05D006950 ORTHO05D008798 7.4e-107 391.3 310 64.2
MELO3C002748.2 Cucumis melo HOM05D006950 ORTHO05D008798 4.1e-105 385.6 280 66.8
Rhsim10G0067400 Rhododendron simsii HOM05D006950 ORTHO05D008798 5.9e-104 381.7 325 60.6
QL02p051313 Quercus lobata HOM05D006950 ORTHO05D008798 7.7e-104 381.3 249 74.3
DCAR_017190 Daucus carota HOM05D006950 ORTHO05D008798 1.3e-98 364.0 326 58.0
CSS0013921 Camellia sinensis var. sinensis HOM05D006950 ORTHO05D008798 3.1e-97 359.4 239 71.1
Ca_04046_v3 Cicer arietinum L. HOM05D006950 ORTHO05D008798 2.6e-96 356.3 224 76.8
Pp3c2_1510 Physcomitrium patens HOM05D006950 ORTHO05D008798 4.4e-91 339.0 300 54.0
AUR62009002 Chenopodium quinoa HOM05D006950 ORTHO05D008798 1.4e-89 334.0 321 56.7
AL686U10010 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 2.6e-88 329.7 343 51.0
Sabra04G0080700 Salix brachista HOM05D006950 ORTHO05D008798 7.2e-86 321.6 217 72.4
CARHR214230 Cardamine hirsuta HOM05D006950 ORTHO05D008798 1.3e-82 310.8 210 70.0
SMO232G0122 Selaginella moellendorffii HOM05D006950 ORTHO05D008798 2.0e-80 303.5 304 50.0
Mapoly0010s0040 Marchantia polymorpha HOM05D006950 ORTHO05D008798 7.2e-78 295.0 303 48.2
AL7G52400 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 1.0e-76 291.2 318 51.9
Nn3g17880 Nelumbo nucifera HOM05D006950 ORTHO05D008798 5.9e-72 275.4 198 65.2
AT5G38360 Arabidopsis thaliana HOM05D006950 ORTHO05D008798 1.4e-68 264.2 217 61.8
Cre04.g213100 Chlamydomonas reinhardtii HOM05D006950 ORTHO05D008798 1.1e-62 244.6 309 41.7
CBR_g51039 Chara braunii HOM05D006950 ORTHO05D008798 1.9e-62 243.8 354 37.0
MCO15G495 Micromonas commoda HOM05D006950 ORTHO05D008798 2.0e-56 223.8 258 44.6
arahy.Tifrunner.gnm1.ann1.IRCK44 Arachis hypogaea HOM05D006950 ORTHO05D008798 1.7e-55 220.7 170 64.1
CDE12G0582 Ceratophyllum demersum HOM05D006950 ORTHO05D008798 3.9e-47 193.0 315 37.1
arahy.Tifrunner.gnm1.ann1.5L16AK Arachis hypogaea HOM05D006950 ORTHO05D008798 2.5e-46 190.3 200 50.5
arahy.Tifrunner.gnm1.ann1.J8JPII Arachis hypogaea HOM05D006950 ORTHO05D008798 1.6e-40 171.0 200 47.5
AagrBONN_evm.TU.Sc2ySwM_362.1440 Anthoceros agrestis HOM05D006950 ORTHO05D008798 2.3e-39 167.2 134 59.7
QL02p051310 Quercus lobata HOM05D006950 ORTHO05D008798 3.6e-37 159.8 90 83.3
Glyma.08G365850 Glycine max HOM05D006950 ORTHO05D008798 1.1e-36 158.3 103 76.7
AL7G52260 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 5.2e-36 156.0 132 60.6
Ca_04053_v3 Cicer arietinum L. HOM05D006950 ORTHO05D008798 8.9e-36 155.2 88 80.7
CSS0023207 Camellia sinensis var. sinensis HOM05D006950 ORTHO05D008798 3.5e-32 143.3 107 60.7
PRCOL_00005525 Prasinoderma coloniale HOM05D006950 ORTHO05D008798 1.1e-30 138.3 346 30.3
arahy.Tifrunner.gnm1.ann1.BFZE3W Arachis hypogaea HOM05D006950 ORTHO05D008798 3.6e-29 133.3 91 71.4
Solyc02g086080.4 Solanum lycopersicum HOM05D006950 ORTHO05D008798 8.9e-28 128.6 100 61.0
AagrBONN_evm.TU.Sc2ySwM_368.701 Anthoceros agrestis HOM05D006950 ORTHO05D008798 1.1e-22 111.7 274 26.3
Os04g0381400 Oryza sativa ssp. japonica HOM05D006950 ORTHO05D008798 4.3e-22 109.8 97 53.6
Potri.017G115350 Populus trichocarpa HOM05D006950 ORTHO05D008798 7.3e-14 82.4 61 63.9
Haze_01682 Corylus avellana HOM05D006950 ORTHO05D043621 4.6e-08 63.2 30 80.0
MBI03_g28954_MAGBIO Magnolia biondii HOM05D000916 ORTHO05D007921 6.7e-07 59.3 144 32.6
Psat6g112920 Pisum sativum HOM05D000916 ORTHO05D007921 1.5e-06 58.2 303 25.1
Eucgr.F04110 Eucalyptus grandis HOM05D000916 ORTHO05D007921 2.5e-06 57.4 305 24.6
arahy.Tifrunner.gnm1.ann1.G72GGE Arachis hypogaea HOM05D000916 ORTHO05D007921 3.3e-06 57.0 303 25.1


User provided reference genes

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