Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.02G066000 Manihot esculenta HOM05D002617 ORTHO05D006076 0.0e+00 1181.4 633 100.0
Potri.017G111300 Populus trichocarpa HOM05D002617 ORTHO05D006076 1.2e-192 677.2 640 60.0
Potri.004G104400 Populus trichocarpa HOM05D002617 ORTHO05D006076 1.3e-176 624.0 517 65.0
Sabra04G0077200 Salix brachista HOM05D002617 ORTHO05D006076 1.3e-176 624.0 628 60.0
Sabra17G0092600 Salix brachista HOM05D002617 ORTHO05D006076 2.2e-173 613.2 722 52.2
Cfa007960 Carpinus fangiana HOM05D002617 ORTHO05D009035 4.6e-163 578.9 532 59.2
TAR629G1560 Trochodendron aralioides HOM05D002617 ORTHO05D006076 1.3e-162 577.4 614 55.0
CiPaw.03G005500 Carya illinoinensis HOM05D002617 ORTHO05D006076 3.7e-160 569.3 536 58.0
Prupe.3G241000 Prunus persica HOM05D002617 ORTHO05D006076 2.6e-158 563.1 613 52.9
Cpa.g.sc179.38 Carica papaya HOM05D002617 ORTHO05D006076 1.3e-157 560.8 542 57.6
TWI74G0354 Tripterygium wilfordii HOM05D002617 ORTHO05D006076 3.8e-157 559.3 638 52.7
Duzib177G0627 Durio zibethinus HOM05D002617 ORTHO05D006076 8.4e-157 558.1 624 54.0
Dinv34860 Davidia involucrata HOM05D002617 ORTHO05D006076 4.2e-156 555.8 649 51.3
Thecc.04G140400 Theobroma cacao HOM05D002617 ORTHO05D006076 4.6e-155 552.4 666 51.2
Duzib235G0774 Durio zibethinus HOM05D002617 ORTHO05D006076 6.0e-155 552.0 561 56.7
Ciclev10013582m.g Citrus clementina HOM05D002617 ORTHO05D009035 9.6e-153 544.7 623 52.2
TAR371G0417 Trochodendron aralioides HOM05D002617 ORTHO05D006076 1.6e-152 543.9 601 52.9
Atru.chr8.797 Acer truncatum HOM05D002617 ORTHO05D006076 2.8e-152 543.1 635 51.0
Haze_14109 Corylus avellana HOM05D002617 ORTHO05D006076 2.8e-152 543.1 713 47.5
Hma1.2p1_0550F.1_g177160 Hydrangea macrophylla HOM05D002617 ORTHO05D006076 1.6e-147 527.3 654 49.4
MD17G1073100 Malus domestica HOM05D002617 ORTHO05D006076 1.6e-147 527.3 493 58.2
Actinidia10244 Actinidia chinensis HOM05D002617 ORTHO05D006076 2.1e-147 526.9 517 57.3
COL.COLO4_16207 Corchorus olitorius HOM05D002617 ORTHO05D006076 2.1e-147 526.9 659 49.8
QL02p053118 Quercus lobata HOM05D002617 ORTHO05D006076 3.9e-146 522.7 652 49.4
Peaxi162Scf00479g00121 Petunia axillaris HOM05D002617 ORTHO05D006076 2.2e-144 516.9 506 54.0
MD09G1082600 Malus domestica HOM05D002617 ORTHO05D006076 1.8e-143 513.8 496 57.7
GSVIVG01036455001 Vitis vinifera HOM05D002617 ORTHO05D009035 3.4e-142 509.6 610 51.0
CANSAT64G0391 Cannabis sativa HOM05D002617 ORTHO05D006076 7.7e-142 508.4 523 57.9
Nitab4.5_0003461g0050 Nicotiana tabacum HOM05D002617 ORTHO05D006076 8.5e-141 505.0 487 55.0
Lj4A130T19 Lonicera japonica HOM05D002617 ORTHO05D006076 1.6e-139 500.7 633 49.0
Gorai.013G188400 Gossypium raimondii HOM05D002617 ORTHO05D006076 3.6e-139 499.6 551 54.8
Gohir.D13G172300 Gossypium hirsutum HOM05D002617 ORTHO05D006076 4.6e-139 499.2 551 54.8
Gohir.A13G161700 Gossypium hirsutum HOM05D002617 ORTHO05D006076 1.4e-138 497.7 551 55.0
RcHm_v2.0_Chr2g0163421 Rosa chinensis HOM05D002617 ORTHO05D006076 5.1e-138 495.7 654 47.4
Haze_14111 Corylus avellana HOM05D002617 ORTHO05D006076 6.7e-138 495.4 790 42.2
Oeu032874.2 Olea europaea HOM05D002617 ORTHO05D006076 5.7e-137 492.3 602 48.7
DCAR_026269 Daucus carota HOM05D002617 ORTHO05D006076 6.9e-135 485.3 651 46.5
Sopen03g009500 Solanum pennellii HOM05D002617 ORTHO05D000002 3.4e-134 483.0 510 52.5
MSTRG.23826 Avicennia marina HOM05D002617 ORTHO05D006076 1.3e-133 481.1 417 58.5
Glyma.13G047700 Glycine max HOM05D002617 ORTHO05D006076 2.2e-133 480.3 453 60.0
arahy.Tifrunner.gnm1.ann1.LH188B Arachis hypogaea HOM05D002617 ORTHO05D006076 6.5e-133 478.8 467 57.0
Nitab4.5_0004487g0050 Nicotiana tabacum HOM05D002617 ORTHO05D006076 1.1e-132 478.0 487 53.6
ClCG11G005280 Citrullus lanatus HOM05D002617 ORTHO05D006076 3.2e-132 476.5 506 53.8
Solyc03g045060.3 Solanum lycopersicum HOM05D002617 ORTHO05D006076 9.4e-132 474.9 505 52.7
arahy.Tifrunner.gnm1.ann1.B4TVCG Arachis hypogaea HOM05D002617 ORTHO05D006076 1.6e-131 474.2 469 56.5
Cc07_g05010 Coffea canephora HOM05D002617 ORTHO05D006076 4.7e-131 472.6 492 52.8
Rhsim07G0215800 Rhododendron simsii HOM05D002617 ORTHO05D006076 7.9e-131 471.9 544 52.4
Aqoxy3G00424 Aquilegia oxysepala HOM05D002617 ORTHO05D006076 2.3e-130 470.3 523 52.6
Eucgr.J01460 Eucalyptus grandis HOM05D002617 ORTHO05D006076 1.1e-129 468.0 630 47.5
MELO3C022066.2 Cucumis melo HOM05D002617 ORTHO05D006076 2.0e-129 467.2 515 53.0
Hma1.2p1_0136F.1_g062020 Hydrangea macrophylla HOM05D002617 ORTHO05D006076 2.6e-129 466.8 421 60.8
FAN02G4200 Fragaria x ananassa HOM05D002617 ORTHO05D006076 3.3e-129 466.5 453 56.5
CsaV3_5G039050 Cucumis sativus L. HOM05D002617 ORTHO05D006076 1.7e-128 464.2 515 52.6
Actinidia19593 Actinidia chinensis HOM05D002617 ORTHO05D006076 3.7e-128 463.0 447 58.6
CAN.G153.18 Capsicum annuum HOM05D002617 ORTHO05D006076 8.2e-128 461.8 444 56.3
Lalb_Chr02g0158361 Lupinus albus HOM05D002617 ORTHO05D006076 8.2e-128 461.8 494 54.0
Lj2g0025982 Lotus japonicus HOM05D002617 ORTHO05D006076 4.1e-127 459.5 455 58.5
Sed0011770 Sechium edule HOM05D002617 ORTHO05D006076 5.3e-127 459.1 492 54.7
FvH4_6g45480 Fragaria vesca HOM05D002617 ORTHO05D006076 3.5e-126 456.4 419 58.0
FAN14G4630 Fragaria x ananassa HOM05D002617 ORTHO05D006076 1.3e-125 454.5 514 51.6
VMungo0540G1549 Vigna mungo HOM05D002617 ORTHO05D006076 1.9e-124 450.7 512 53.3
ECA232G1923 Erigeron canadensis HOM05D002617 ORTHO05D006076 5.5e-124 449.1 518 51.4
HanXRQChr14g0439661 Helianthus annuus HOM05D002617 ORTHO05D006076 8.0e-123 445.3 523 50.3
Phvul.L003037 Phaseolus vulgaris HOM05D002617 ORTHO05D006076 8.0e-123 445.3 443 57.8
Ca_26958_v3 Cicer arietinum L. HOM05D002617 ORTHO05D006076 4.0e-122 443.0 508 53.9
EL10Ac5g11460 Beta vulgaris HOM05D002617 ORTHO05D006076 3.3e-121 439.9 502 51.2
Lalb_Chr21g0317971 Lupinus albus HOM05D002617 ORTHO05D006076 4.1e-119 433.0 531 50.8
Medtr6g016990 Medicago truncatula HOM05D002617 ORTHO05D006076 9.1e-119 431.8 477 53.7
Migut.H00535 Erythranthe guttata HOM05D002617 ORTHO05D009035 7.7e-118 428.7 459 53.8
Glyma.19G040800 Glycine max HOM05D002617 ORTHO05D006076 2.2e-117 427.2 544 50.7
Sc12g0007600 Simmondsia chinensis HOM05D002617 ORTHO05D006076 1.1e-116 424.9 524 50.0
THA.LOC104822697 Tarenaya hassleriana HOM05D002617 ORTHO05D006076 3.2e-116 423.3 479 53.4
Psat0s1160g0440 Pisum sativum HOM05D002617 ORTHO05D006076 1.0e-114 418.3 552 50.7
PSO017G2525 Papaver somniferum HOM05D002617 ORTHO05D006076 1.8e-114 417.5 521 49.3
HanXRQChr15g0489371 Helianthus annuus HOM05D002617 ORTHO05D006076 2.3e-114 417.2 477 51.6
Aa31LG9G16990 Aethionema arabicum HOM05D002617 ORTHO05D006076 3.0e-114 416.8 412 57.3
PSO478G3319 Papaver somniferum HOM05D002617 ORTHO05D006076 6.8e-114 415.6 521 49.1
AUR62029876 Chenopodium quinoa HOM05D002617 ORTHO05D006076 2.0e-113 414.1 434 54.4
THA.LOC104805556 Tarenaya hassleriana HOM05D002617 ORTHO05D006076 2.8e-112 410.2 450 54.4
GSVIVG01011977001 Vitis vinifera HOM05D002617 ORTHO05D006076 6.3e-112 409.1 344 62.8
TPR.G9686 Trifolium pratense HOM05D002617 ORTHO05D006076 1.2e-110 404.8 375 59.7
Thhalv10027714m.g Eutrema salsugineum HOM05D002617 ORTHO05D006076 2.7e-110 403.7 461 53.4
AUR62025837 Chenopodium quinoa HOM05D002617 ORTHO05D006076 7.7e-110 402.1 446 51.8
Oeu043861.1 Olea europaea HOM05D002617 ORTHO05D006076 1.0e-109 401.7 697 38.5
PGR042G0381 Punica granatum HOM05D002617 ORTHO05D006076 1.0e-109 401.7 543 47.0
ATR0598G067 Amborella trichopoda HOM05D002617 ORTHO05D006076 3.2e-108 396.7 474 50.2
AT5G38600 Arabidopsis thaliana HOM05D002617 ORTHO05D006076 3.2e-108 396.7 475 50.3
Carub.0007s3725 Capsella rubella HOM05D002617 ORTHO05D006076 5.2e-106 389.4 468 51.3
Carub.0002s1348 Capsella rubella HOM05D002617 ORTHO05D006076 8.8e-106 388.7 432 51.9
unitig_736.g22255 Utricularia gibba HOM05D002617 ORTHO05D006076 2.0e-105 387.5 407 53.1
AL7G51930 Arabidopsis lyrata HOM05D002617 ORTHO05D006076 1.7e-104 384.4 475 50.3
SGA_v2.0_scaffold204G41654 Striga asiatica HOM05D002617 ORTHO05D006076 4.1e-103 379.8 472 49.8
BcaB02g08001 Brassica carinata HOM05D002617 ORTHO05D006076 7.0e-103 379.0 477 49.5
Sp7g03340 Schrenkiella parvula HOM05D002617 ORTHO05D006076 2.7e-102 377.1 399 54.9
Lsat_1_v5_gn_4_175880 Lactuca sativa HOM05D002617 ORTHO05D006076 1.0e-101 375.2 439 50.3
BcaC08g44397 Brassica carinata HOM05D002617 ORTHO05D006076 1.3e-101 374.8 477 49.5
BolC6t37041H Brassica oleracea HOM05D002617 ORTHO05D006076 1.3e-101 374.8 443 51.5
AL2G25720 Arabidopsis lyrata HOM05D002617 ORTHO05D006076 2.3e-101 374.0 435 49.7
A07p19790 Brassica napus HOM05D002617 ORTHO05D006076 2.9e-101 373.6 441 51.9
C06p18260 Brassica napus HOM05D000054 ORTHO05D006076 2.9e-101 373.6 478 49.4
BraA07t29680Z Brassica rapa HOM05D002617 ORTHO05D006076 2.9e-101 373.6 441 51.9
Aa31LG2G3590 Aethionema arabicum HOM05D002617 ORTHO05D006076 5.0e-101 372.9 462 48.7
CARHR059670 Cardamine hirsuta HOM05D002617 ORTHO05D006076 9.5e-100 368.6 433 50.3
AT1G67210 Arabidopsis thaliana HOM05D002617 ORTHO05D006076 1.4e-98 364.8 363 54.3
CARHR214050 Cardamine hirsuta HOM05D002617 ORTHO05D006076 8.9e-98 362.1 462 49.4
Sp5g22140 Schrenkiella parvula HOM05D002617 ORTHO05D006076 8.9e-98 362.1 370 55.9
BcaB05g24247 Brassica carinata HOM05D002617 ORTHO05D006076 4.9e-96 356.3 380 54.7
HPP92_011591 Vanilla planifolia HOM05D002617 ORTHO05D006076 2.7e-94 350.5 381 52.5
BraA02t06470Z Brassica rapa HOM05D002617 ORTHO05D006076 3.5e-94 350.1 400 53.2
A02p14070 Brassica napus HOM05D002617 ORTHO05D006076 7.8e-94 349.0 395 53.4
C02p22680 Brassica napus HOM05D002617 ORTHO05D006076 1.3e-93 348.2 399 52.4
vmacro04611 Vaccinium macrocarpon HOM05D002617 ORTHO05D006076 1.3e-93 348.2 543 42.2
Thhalv10018682m.g Eutrema salsugineum HOM05D002617 ORTHO05D006076 3.9e-93 346.7 335 56.4
BcaC03g14816 Brassica carinata HOM05D002617 ORTHO05D006076 5.0e-93 346.3 398 52.3
BolC2t08421H Brassica oleracea HOM05D002617 ORTHO05D006076 5.0e-93 346.3 398 52.3
EL10Ac6g14526 Beta vulgaris HOM05D002617 ORTHO05D006076 1.7e-88 331.3 421 48.7
Os06g0495700 Oryza sativa ssp. japonica HOM05D002617 ORTHO05D006076 3.7e-88 330.1 481 45.1
Zm00001eb182330 Zea mays HOM05D002617 ORTHO05D006076 1.1e-87 328.6 508 44.1
Sc11g0002970 Simmondsia chinensis HOM05D002617 ORTHO05D006076 9.2e-87 325.5 410 48.0
AUR62007748 Chenopodium quinoa HOM05D002617 ORTHO05D006076 9.5e-84 315.5 388 47.9
Hund05776 Selenicereus undatus HOM05D002617 ORTHO05D006076 1.2e-83 315.1 384 50.0
CSS0005448 Camellia sinensis var. sinensis HOM05D002617 ORTHO05D006076 8.1e-83 312.4 314 58.0
Ah.03g138020 Amaranthus hybridus HOM05D002617 ORTHO05D006076 5.2e-82 309.7 443 42.9
DCAR_026709 Daucus carota HOM05D002617 ORTHO05D006076 5.2e-82 309.7 478 43.7
FAN05G1346 Fragaria x ananassa HOM05D002617 ORTHO05D006076 5.2e-82 309.7 270 58.9
AUR62002941 Chenopodium quinoa HOM05D002617 ORTHO05D006076 2.9e-80 303.9 347 50.1
CSS0031641 Camellia sinensis var. sinensis HOM05D002617 ORTHO05D006076 4.9e-80 303.1 230 69.6
Actinidia13004 Actinidia chinensis HOM05D002617 ORTHO05D006076 1.7e-77 294.7 403 45.7
Actinidia29638 Actinidia chinensis HOM05D002617 ORTHO05D006076 3.3e-76 290.4 408 45.6
FAN09G0965 Fragaria x ananassa HOM05D002617 ORTHO05D006076 6.8e-74 282.7 207 66.2
Dinv33921 Davidia involucrata HOM05D002617 ORTHO05D009035 2.0e-73 281.2 256 57.8
Lsat_1_v5_gn_8_37540 Lactuca sativa HOM05D002617 ORTHO05D006076 6.0e-70 269.6 327 46.8
CDE03G0434 Ceratophyllum demersum HOM05D002617 ORTHO05D006076 3.9e-69 266.9 316 50.6
Mapoly0126s0021 Marchantia polymorpha HOM05D002617 ORTHO05D006076 1.1e-63 248.8 397 40.1
SMO005G0008 Selaginella moellendorffii HOM05D002617 ORTHO05D006076 2.3e-61 241.1 364 41.8
Dinv33922 Davidia involucrata HOM05D002617 ORTHO05D006076 2.2e-56 224.6 216 59.3
Lj3A1022T61 Lonicera japonica HOM05D002617 ORTHO05D006076 2.1e-54 218.0 184 60.9
SMO197G0066 Selaginella moellendorffii HOM05D002617 ORTHO05D006076 1.8e-50 204.9 364 38.5
Nn8g40574 Nelumbo nucifera HOM05D002617 ORTHO05D006076 8.7e-45 186.0 323 38.7
Ah.02g115020 Amaranthus hybridus HOM05D002617 ORTHO05D006076 2.8e-43 181.0 433 34.2
SGA_v2.0_scaffold150G36614 Striga asiatica HOM05D002617 ORTHO05D006076 6.2e-43 179.9 463 31.5
CBR_g21963 Chara braunii HOM05D002617 ORTHO05D006076 3.1e-42 177.6 376 35.6
Glyma.19G043901 Glycine max HOM05D002617 ORTHO05D006076 3.5e-38 164.1 256 48.0
PGSC0003DMG400003361 Solanum tuberosum HOM05D002617 ORTHO05D006076 2.1e-35 154.8 165 52.7
AagrBONN_evm.TU.Sc2ySwM_344.4970 Anthoceros agrestis HOM05D002617 ORTHO05D006076 4.2e-31 140.6 201 40.3
Pp3c8_12390 Physcomitrium patens HOM05D002617 ORTHO05D006076 1.3e-27 129.0 516 29.3
CDE04G2372 Ceratophyllum demersum HOM05D002617 ORTHO05D006076 1.1e-23 115.9 216 36.1
CSS0013506 Camellia sinensis var. sinensis HOM05D002617 ORTHO05D006076 9.4e-23 112.8 263 31.6
SalBow1G4795 Salvia bowleyana HOM05D002617 ORTHO05D006076 2.7e-22 111.3 134 49.3
SEGI_27964 Sequoiadendron giganteum HOM05D002617 ORTHO05D006076 9.1e-10 69.7 47 68.1
Lsat_1_v5_gn_8_136421 Lactuca sativa HOM05D002617 ORTHO05D048373 5.9e-09 67.0 78 46.2
Actinidia19277 Actinidia chinensis HOM05D002617 ORTHO05D006076 7.7e-09 66.6 78 52.6
CDE03G0290 Ceratophyllum demersum HOM05D002617 ORTHO05D006076 1.0e-08 66.2 127 34.6


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