Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.02G062500 Manihot esculenta HOM05D006288 ORTHO05D007416 1.0e-58 229.9 121 100.0
GSVIVG01036516001 Vitis vinifera HOM05D006288 ORTHO05D007416 2.0e-43 179.1 115 80.9
Duzib133G0644 Durio zibethinus HOM05D006288 ORTHO05D007416 4.5e-43 177.9 117 81.2
Duzib133G1254 Durio zibethinus HOM05D006288 ORTHO05D007416 4.5e-43 177.9 117 81.2
Dinv34894 Davidia involucrata HOM05D006288 ORTHO05D007416 1.0e-42 176.8 115 80.9
CSS0015874 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 1.3e-42 176.4 115 79.1
CSS0028097 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 1.3e-42 176.4 115 79.1
Manes.01G106000 Manihot esculenta HOM05D006288 ORTHO05D007416 2.9e-42 175.3 120 78.3
vmacro18118 Vaccinium macrocarpon HOM05D006288 ORTHO05D007416 3.8e-42 174.9 113 78.8
Gohir.D12G056100 Gossypium hirsutum HOM05D006288 ORTHO05D007416 5.0e-42 174.5 117 78.6
Gorai.008G059200 Gossypium raimondii HOM05D006288 ORTHO05D007416 5.0e-42 174.5 117 78.6
Rhsim10G0068900 Rhododendron simsii HOM05D006288 ORTHO05D007416 8.5e-42 173.7 116 78.4
Gohir.A12G056700 Gossypium hirsutum HOM05D006288 ORTHO05D007416 2.5e-41 172.2 117 77.8
Rhsim08G0078400 Rhododendron simsii HOM05D006288 ORTHO05D007416 2.5e-41 172.2 116 78.4
PGR004G0851 Punica granatum HOM05D006288 ORTHO05D007416 4.2e-41 171.4 115 78.3
Thecc.10G108100 Theobroma cacao HOM05D005170 ORTHO05D007416 4.2e-41 171.4 115 80.0
Cc07_g04640 Coffea canephora HOM05D006288 ORTHO05D007416 7.2e-41 170.6 110 80.9
Cfa007713 Carpinus fangiana HOM05D006288 ORTHO05D007416 1.6e-40 169.5 107 81.3
Oeu007090.1 Olea europaea HOM05D006288 ORTHO05D007416 1.6e-40 169.5 110 80.0
CSS0029131 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 2.8e-40 168.7 115 76.5
Cpa.g.sc14.255 Carica papaya HOM05D006288 ORTHO05D007416 2.8e-40 168.7 113 77.9
TAR629G2245 Trochodendron aralioides HOM05D006288 ORTHO05D007416 6.1e-40 167.5 111 77.5
Lj3g0015520 Lotus japonicus HOM05D006288 ORTHO05D007416 8.0e-40 167.2 123 69.9
Ca_13697_v3 Cicer arietinum L. HOM05D006288 ORTHO05D007416 1.4e-39 166.4 120 72.5
Hma1.2p1_0304F.1_g119265 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 2.3e-39 165.6 113 76.1
Hma1.2p1_0304F.1_g119270 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 2.3e-39 165.6 113 76.1
RcHm_v2.0_Chr2g0164421 Rosa chinensis HOM05D006288 ORTHO05D007416 4.0e-39 164.9 107 77.6
CSS0016762 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 5.2e-39 164.5 112 77.7
CSS0047986 Camellia sinensis var. sinensis HOM05D006288 ORTHO05D007416 5.2e-39 164.5 112 77.7
Atru.chr8.595 Acer truncatum HOM05D006288 ORTHO05D007416 8.8e-39 163.7 117 72.6
Sc11g0008960 Simmondsia chinensis HOM05D006288 ORTHO05D007416 8.8e-39 163.7 108 75.0
CiPaw.03G081300 Carya illinoinensis HOM05D006288 ORTHO05D007416 1.5e-38 162.9 107 76.6
Peaxi162Scf00019g00316 Petunia axillaris HOM05D006288 ORTHO05D007416 1.5e-38 162.9 109 78.9
PSO832G2920 Papaver somniferum HOM05D006288 ORTHO05D007416 2.0e-38 162.5 108 75.9
Phvul.004G044700 Phaseolus vulgaris HOM05D006288 ORTHO05D007416 2.0e-38 162.5 121 70.2
Prupe.3G247000 Prunus persica HOM05D006288 ORTHO05D007416 2.0e-38 162.5 115 73.9
QL09p029462 Quercus lobata HOM05D006288 ORTHO05D007416 2.0e-38 162.5 117 71.8
ATR0691G027 Amborella trichopoda HOM05D006288 ORTHO05D007416 2.6e-38 162.2 112 71.4
PSO210G6985 Papaver somniferum HOM05D006288 ORTHO05D007416 2.6e-38 162.2 108 75.0
VMungo0464G1523 Vigna mungo HOM05D006288 ORTHO05D007416 2.6e-38 162.2 118 69.5
Sopen02g015910 Solanum pennellii HOM05D006288 ORTHO05D007416 3.4e-38 161.8 110 76.4
PGSC0003DMG400026550 Solanum tuberosum HOM05D006288 ORTHO05D007416 3.4e-38 161.8 109 77.1
TWI60G1717 Tripterygium wilfordii HOM05D006288 ORTHO05D007416 3.4e-38 161.8 121 72.7
Nitab4.5_0003203g0060 Nicotiana tabacum HOM05D006288 ORTHO05D007416 4.4e-38 161.4 108 77.8
Solyc02g065690.3 Solanum lycopersicum HOM05D006288 ORTHO05D007416 4.4e-38 161.4 109 77.1
arahy.Tifrunner.gnm1.ann1.J0I6JM Arachis hypogaea HOM05D006288 ORTHO05D007416 5.7e-38 161.0 114 69.3
PSO541G1058 Papaver somniferum HOM05D006288 ORTHO05D007416 5.7e-38 161.0 108 76.9
Migut.K00879 Erythranthe guttata HOM05D006288 ORTHO05D007416 7.5e-38 160.6 117 73.5
Medtr3g034300 Medicago truncatula HOM05D006288 ORTHO05D007416 7.5e-38 160.6 115 71.3
Hund16253 Selenicereus undatus HOM05D006288 ORTHO05D007416 7.5e-38 160.6 108 74.1
TPR.G14566 Trifolium pratense HOM05D006288 ORTHO05D007416 7.5e-38 160.6 115 72.2
Psat5g210920 Pisum sativum HOM05D006288 ORTHO05D007416 9.8e-38 160.2 115 71.3
Lalb_Chr21g0318141 Lupinus albus HOM05D006288 ORTHO05D007416 2.2e-37 159.1 120 67.5
Psat5g210840 Pisum sativum HOM05D006288 ORTHO05D007416 3.7e-37 158.3 116 69.0
Glyma.13G051400 Glycine max HOM05D006288 ORTHO05D007416 4.9e-37 157.9 120 68.3
Glyma.19G037000 Glycine max HOM05D006288 ORTHO05D007416 4.9e-37 157.9 120 69.2
PSO675G0562 Papaver somniferum HOM05D006288 ORTHO05D007416 6.3e-37 157.5 108 75.0
Eucgr.F02878 Eucalyptus grandis HOM05D006288 ORTHO05D007416 3.1e-36 155.2 111 72.1
MD17G1067500 Malus domestica HOM05D006288 ORTHO05D007416 5.4e-36 154.5 115 67.0
Ah.16g100880 Amaranthus hybridus HOM05D006288 ORTHO05D007416 7.0e-36 154.1 108 71.3
MD09G1077100 Malus domestica HOM05D006288 ORTHO05D007416 9.2e-36 153.7 115 68.7
SalBow7G0779 Salvia bowleyana HOM05D006288 ORTHO05D007416 9.2e-36 153.7 117 70.9
SGA_v2.0_scaffold30G12393 Striga asiatica HOM05D006288 ORTHO05D007416 2.0e-35 152.5 111 69.4
Psat5g212400 Pisum sativum HOM05D006288 ORTHO05D007416 2.7e-35 152.1 111 66.7
Lsat_1_v5_gn_4_174040 Lactuca sativa HOM05D006288 ORTHO05D007416 7.8e-35 150.6 108 72.2
THA.LOC104805112 Tarenaya hassleriana HOM05D006288 ORTHO05D007416 1.7e-34 149.4 108 68.5
CsaV3_4G009920 Cucumis sativus L. HOM05D006288 ORTHO05D007416 2.3e-34 149.1 115 67.8
Os02g0190900 Oryza sativa ssp. japonica HOM05D006288 ORTHO05D007416 5.0e-34 147.9 108 69.4
unitig_32.g10759 Utricularia gibba HOM05D006288 ORTHO05D007416 5.0e-34 147.9 117 65.0
CANSAT64G2264 Cannabis sativa HOM05D005170 ORTHO05D007416 6.6e-34 147.5 114 64.0
Actinidia17612 Actinidia chinensis HOM05D006288 ORTHO05D007416 1.9e-33 146.0 107 72.0
Sabra17G0089200 Salix brachista HOM05D006288 ORTHO05D007416 4.3e-33 144.8 95 76.8
FAN10G3625 Fragaria x ananassa HOM05D006288 ORTHO05D007416 5.6e-33 144.4 113 65.5
C07p39960 Brassica napus HOM05D006288 ORTHO05D007416 1.6e-32 142.9 104 68.3
BolC7t44529H Brassica oleracea HOM05D006288 ORTHO05D007416 1.6e-32 142.9 104 67.3
BraA06t26742Z Brassica rapa HOM05D006288 ORTHO05D007416 2.8e-32 142.1 108 64.8
Zm00001eb234970 Zea mays HOM05D006288 ORTHO05D007416 6.1e-32 141.0 107 63.6
SEGI_23755 Sequoiadendron giganteum HOM05D006288 ORTHO05D007416 6.8e-31 137.5 120 58.3
FAN10G2886 Fragaria x ananassa HOM05D006288 ORTHO05D007416 8.9e-31 137.1 99 69.7
Atru.BG.156.p Acer truncatum HOM05D006288 ORTHO05D007416 2.0e-30 136.0 94 72.3
Actinidia26277 Actinidia chinensis HOM05D006288 ORTHO05D007416 2.6e-30 135.6 86 76.7
AUR62023135 Chenopodium quinoa HOM05D006288 ORTHO05D007416 3.4e-30 135.2 116 57.8
HPP92_018391 Vanilla planifolia HOM05D006288 ORTHO05D007416 5.7e-30 134.4 109 65.1
EL10Ac2g04409 Beta vulgaris HOM05D006288 ORTHO05D007416 7.5e-30 134.0 113 61.1
FAN14G1171 Fragaria x ananassa HOM05D006288 ORTHO05D007416 4.9e-29 131.3 111 63.1
Nn4g23570 Nelumbo nucifera HOM05D006288 ORTHO05D007416 8.3e-29 130.6 115 63.5
Carub.0008s0943 Capsella rubella HOM05D006288 ORTHO05D007416 7.8e-27 124.0 109 57.8
COL.COLO4_00228 Corchorus olitorius HOM05D006288 ORTHO05D007416 2.3e-26 122.5 74 85.1
CAN.G93.47 Capsicum annuum HOM05D006288 ORTHO05D007416 3.0e-26 122.1 108 61.1
Nitab4.5_0002249g0090 Nicotiana tabacum HOM05D006288 ORTHO05D007416 6.6e-26 120.9 72 87.5
Lsat_1_v5_gn_4_173980 Lactuca sativa HOM05D006288 ORTHO05D007416 1.9e-25 119.4 108 59.3
DCAR_011002 Daucus carota HOM05D006288 ORTHO05D007416 3.3e-25 118.6 72 84.7
Potri.017G106200 Populus trichocarpa HOM05D006288 ORTHO05D007416 7.3e-25 117.5 108 57.4
Aa31LG7G12050 Aethionema arabicum HOM05D006288 ORTHO05D007416 8.0e-24 114.0 115 52.2
MELO3C018910.2 Cucumis melo HOM05D006288 ORTHO05D007416 1.0e-23 113.6 88 64.8
Sed0021882 Sechium edule HOM05D006288 ORTHO05D007416 1.8e-23 112.8 88 62.5
Hma1.2p1_2186F.1_g316383 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 5.2e-23 111.3 72 79.2
Hma1.2p1_3488F.1_g336360 Hydrangea macrophylla HOM05D006288 ORTHO05D007416 5.2e-23 111.3 72 79.2
CDE10G0042 Ceratophyllum demersum HOM05D006288 ORTHO05D007416 1.5e-22 109.8 95 57.9
ClCG07G016140 Citrullus lanatus HOM05D006288 ORTHO05D007416 1.5e-22 109.8 89 60.7
ECA232G4388 Erigeron canadensis HOM05D006288 ORTHO05D007416 2.0e-22 109.4 117 51.3
TAR371G0310 Trochodendron aralioides HOM05D006288 ORTHO05D007416 2.0e-22 109.4 92 60.9
FAN05G5526 Fragaria x ananassa HOM05D006288 ORTHO05D007416 7.5e-22 107.5 75 72.0
FAN02G0987 Fragaria x ananassa HOM05D006288 ORTHO05D007416 2.9e-21 105.5 111 54.1
FAN09G1057 Fragaria x ananassa HOM05D010582 ORTHO05D007416 2.9e-21 105.5 111 54.1
CARHR287980 Cardamine hirsuta HOM05D006288 ORTHO05D007416 1.4e-20 103.2 109 51.4
Eucgr.K01979 Eucalyptus grandis HOM05D006288 ORTHO05D007416 1.4e-20 103.2 91 64.8
Thhalv10005135m.g Eutrema salsugineum HOM05D006288 ORTHO05D007416 7.0e-20 100.9 74 64.9
AL8G23340 Arabidopsis lyrata HOM05D006288 ORTHO05D007416 1.6e-19 99.8 72 65.3
AL954U10010 Arabidopsis lyrata HOM05D006288 ORTHO05D007416 2.7e-19 99.0 109 47.7
A09p04890 Brassica napus HOM05D006288 ORTHO05D007416 2.7e-19 99.0 73 65.8
BraA09t36127Z Brassica rapa HOM05D006288 ORTHO05D007416 2.7e-19 99.0 73 65.8
FvH4_6g46100 Fragaria vesca HOM05D006288 ORTHO05D007416 2.7e-19 99.0 69 72.5
Sp2g19860 Schrenkiella parvula HOM05D006288 ORTHO05D007416 2.7e-19 99.0 71 66.2
BcaB04g19620 Brassica carinata HOM05D006288 ORTHO05D007416 3.5e-19 98.6 73 65.8
BcaC04g23731 Brassica carinata HOM05D006288 ORTHO05D007416 6.0e-19 97.8 71 66.2
C09p05280 Brassica napus HOM05D006288 ORTHO05D007416 6.0e-19 97.8 71 66.2
AT5G49550 Arabidopsis thaliana HOM05D006288 ORTHO05D007416 1.0e-18 97.1 72 63.9
HanXRQChr15g0464891 Helianthus annuus HOM05D006288 ORTHO05D007416 5.0e-18 94.7 90 56.7
FvH4_6g24710 Fragaria vesca HOM05D006288 ORTHO05D007416 8.6e-18 94.0 59 78.0
FAN14G4004 Fragaria x ananassa HOM05D006288 ORTHO05D007416 8.6e-18 94.0 59 78.0
Mapoly0015s0174 Marchantia polymorpha HOM05D006288 ORTHO05D007416 1.5e-17 93.2 104 42.3
AagrBONN_evm.TU.Sc2ySwM_344.2644 Anthoceros agrestis HOM05D006288 ORTHO05D007416 3.6e-16 88.6 106 42.5
Pp3c21_3840 Physcomitrium patens HOM05D006288 ORTHO05D007416 2.0e-14 82.8 103 43.7
SHI46878 Sapria himalayana HOM05D006288 ORTHO05D007416 6.4e-13 77.8 73 47.9
SMO358G0122 Selaginella moellendorffii HOM05D006288 ORTHO05D007416 2.7e-11 72.4 94 37.2
Psat6g174640 Pisum sativum HOM05D006288 ORTHO05D007416 5.1e-10 68.2 62 58.1
FAN03G1360 Fragaria x ananassa HOM05D006288 ORTHO05D007416 1.2e-08 63.5 45 68.9
Haze_03283 Corylus avellana HOM05D002280 ORTHO05D002322 6.2e-08 61.2 43 69.8
FAN06G1951 Fragaria x ananassa HOM05D006288 ORTHO05D007416 3.4e-06 55.5 105 35.2


User provided reference genes

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