Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.02G060950 Manihot esculenta HOM05D011223 ORTHO05D010778 5.1e-108 394.4 200 100.0
Manes.01G104500 Manihot esculenta HOM05D011223 ORTHO05D010778 1.8e-49 199.9 233 57.1
Potri.017G102200 Populus trichocarpa HOM05D011223 ORTHO05D010778 6.0e-24 115.2 220 43.6
Potri.004G112600 Populus trichocarpa HOM05D011223 ORTHO05D010778 2.3e-20 103.2 219 42.0
Sabra17G0088100 Salix brachista HOM05D011223 ORTHO05D010778 3.4e-19 99.4 220 40.0
Thecc.04G108700 Theobroma cacao HOM05D013808 ORTHO05D010778 4.4e-19 99.0 261 34.5
QL02p065009 Quercus lobata HOM05D012028 ORTHO05D010778 2.9e-18 96.3 210 40.0
CSS0003820 Camellia sinensis var. sinensis HOM05D011223 ORTHO05D010778 6.0e-16 88.6 213 36.6
Cfa007707 Carpinus fangiana HOM05D012028 ORTHO05D010778 1.5e-14 84.0 237 36.7
COL.COLO4_10646 Corchorus olitorius HOM05D013808 ORTHO05D010778 1.9e-14 83.6 85 54.1
Sabra04G0072200 Salix brachista HOM05D011223 ORTHO05D010778 1.9e-14 83.6 236 36.0
Actinidia18091 Actinidia chinensis HOM05D011223 ORTHO05D010778 2.1e-13 80.1 228 34.2
Prupe.3G247600 Prunus persica HOM05D012028 ORTHO05D010778 1.1e-12 77.8 219 34.7
CiPaw.04G051300 Carya illinoinensis HOM05D011223 ORTHO05D010778 2.4e-12 76.6 238 34.9
Dinv33878 Davidia involucrata HOM05D011223 ORTHO05D010778 2.4e-12 76.6 209 35.9
Dinv34899 Davidia involucrata HOM05D004302 ORTHO05D004939 2.2e-10 70.1 184 32.1
Gohir.A11G160400 Gossypium hirsutum HOM05D013808 ORTHO05D010778 2.2e-10 70.1 203 35.0
Gohir.D11G166600 Gossypium hirsutum HOM05D013808 ORTHO05D010778 3.8e-10 69.3 203 34.5
Gorai.001G089600 Gossypium raimondii HOM05D013808 ORTHO05D010778 3.8e-10 69.3 199 33.2
Gorai.007G177600 Gossypium raimondii HOM05D013808 ORTHO05D010778 3.8e-10 69.3 203 34.5
Gohir.D07G083950 Gossypium hirsutum HOM05D013808 ORTHO05D010778 1.4e-09 67.4 199 32.2
Sabra17G0087900 Salix brachista HOM05D000878 ORTHO05D004971 3.2e-09 66.2 43 72.1
AUR62023145 Chenopodium quinoa HOM05D027608 ORTHO05D010778 1.6e-08 63.9 105 41.9
MD09G1076400 Malus domestica HOM05D012028 ORTHO05D010778 7.8e-08 61.6 40 75.0
Cpa.g.sc14.249 Carica papaya HOM05D012028 ORTHO05D010778 1.3e-07 60.8 90 41.1
FAN09G1346 Fragaria x ananassa HOM05D012028 ORTHO05D010778 2.3e-07 60.1 204 31.9
TAR622G1316 Trochodendron aralioides HOM05D011223 ORTHO05D010778 2.3e-07 60.1 110 43.6
AUR62009463 Chenopodium quinoa HOM05D027608 ORTHO05D010778 3.0e-07 59.7 105 39.0
FvH4_6g46170 Fragaria vesca HOM05D012028 ORTHO05D010778 3.9e-07 59.3 206 34.0
Sed0011744 Sechium edule HOM05D034995 ORTHO05D010778 5.1e-07 58.9 201 29.9
FAN05G4491 Fragaria x ananassa HOM05D012028 ORTHO05D010778 8.7e-07 58.2 204 32.4
CANSAT64G2872 Cannabis sativa HOM05D012028 ORTHO05D010778 1.1e-06 57.8 40 72.5
Nn4g23563 Nelumbo nucifera HOM05D011223 ORTHO05D010778 1.5e-06 57.4 217 33.2
MD09G1076500 Malus domestica HOM05D012028 ORTHO05D010778 3.3e-06 56.2 241 28.2
ClCG07G016120 Citrullus lanatus HOM05D034995 ORTHO05D010778 5.6e-06 55.5 206 30.1
FAN02G2376 Fragaria x ananassa HOM05D012028 ORTHO05D010778 5.6e-06 55.5 215 31.2
SalBow1G4522 Salvia bowleyana HOM05D013808 ORTHO05D010778 9.6e-06 54.7 50 60.0


User provided reference genes

Program Settings