Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.02G059000 Manihot esculenta HOM05D007430 ORTHO05D009322 4.5e-61 237.7 113 100.0
Sabra17G0085900 Salix brachista HOM05D007430 ORTHO05D009322 2.2e-44 182.2 111 75.7
Potri.017G099600 Populus trichocarpa HOM05D007430 ORTHO05D009322 8.5e-44 180.3 111 74.8
TWI34G0957 Tripterygium wilfordii HOM05D007430 ORTHO05D009322 3.2e-43 178.3 111 73.0
Dinv33859 Davidia involucrata HOM05D007430 ORTHO05D009322 2.1e-42 175.6 106 76.4
Prupe.3G249500 Prunus persica HOM05D007430 ORTHO05D009322 8.8e-41 170.2 109 70.6
RcHm_v2.0_Chr2g0164961 Rosa chinensis HOM05D007430 ORTHO05D009322 2.0e-40 169.1 109 72.5
MD17G1065300 Malus domestica HOM05D007430 ORTHO05D009322 2.6e-40 168.7 109 72.5
GSVIVG01037660001 Vitis vinifera HOM05D007430 ORTHO05D009322 3.4e-40 168.3 111 71.2
arahy.Tifrunner.gnm1.ann1.T6F203 Arachis hypogaea HOM05D007430 ORTHO05D009322 1.7e-39 166.0 110 70.9
Eucgr.C00827 Eucalyptus grandis HOM05D007430 ORTHO05D009322 1.7e-39 166.0 109 71.6
PGR004G1880 Punica granatum HOM05D007430 ORTHO05D009322 1.7e-39 166.0 108 72.2
arahy.Tifrunner.gnm1.ann1.LXP3AQ Arachis hypogaea HOM05D007430 ORTHO05D009322 4.8e-39 164.5 110 70.0
Thecc.04G105400 Theobroma cacao HOM05D007430 ORTHO05D009322 4.8e-39 164.5 111 68.5
Lalb_Chr02g0158751 Lupinus albus HOM05D007430 ORTHO05D009322 1.8e-38 162.5 110 70.0
FAN14G5598 Fragaria x ananassa HOM05D007430 ORTHO05D009322 3.1e-38 161.8 109 70.6
Hma1.2p1_1502F.1_g287440 Hydrangea macrophylla HOM05D007430 ORTHO05D009322 4.1e-38 161.4 108 70.4
QL02p065966 Quercus lobata HOM05D007430 ORTHO05D009322 7.0e-38 160.6 112 70.5
Duzib138G0563 Durio zibethinus HOM05D007430 ORTHO05D009322 1.2e-37 159.8 111 65.8
TAR371G1216 Trochodendron aralioides HOM05D007430 ORTHO05D009322 1.6e-37 159.5 109 68.8
Ca_14394_v3 Cicer arietinum L. HOM05D007430 ORTHO05D009322 2.7e-37 158.7 110 68.2
FAN05G2487 Fragaria x ananassa HOM05D007430 ORTHO05D009322 2.7e-37 158.7 109 68.8
Nn8g40106 Nelumbo nucifera HOM05D007430 ORTHO05D009322 7.7e-37 157.1 111 68.5
Gohir.D07G186800 Gossypium hirsutum HOM05D007430 ORTHO05D009322 1.3e-36 156.4 107 69.2
Gorai.001G207400 Gossypium raimondii HOM05D007430 ORTHO05D009322 1.3e-36 156.4 107 69.2
TPR.G15952 Trifolium pratense HOM05D007430 ORTHO05D009322 1.3e-36 156.4 110 67.3
FAN09G2572 Fragaria x ananassa HOM05D007430 ORTHO05D009322 2.2e-36 155.6 108 68.5
Gohir.A07G179900 Gossypium hirsutum HOM05D007430 ORTHO05D009322 8.5e-36 153.7 107 68.2
CiPaw.03G083500 Carya illinoinensis HOM05D007430 ORTHO05D009322 1.1e-35 153.3 110 68.2
Lj2g0026299 Lotus japonicus HOM05D007430 ORTHO05D009322 1.1e-35 153.3 110 64.5
Medtr6g015965 Medicago truncatula HOM05D007430 ORTHO05D009322 1.1e-35 153.3 110 64.5
TAR629G2042 Trochodendron aralioides HOM05D007430 ORTHO05D009322 3.2e-35 151.8 111 63.1
Cpa.g.sc14.221 Carica papaya HOM05D007430 ORTHO05D009322 9.5e-35 150.2 109 67.0
Ciclev10013162m.g Citrus clementina HOM05D007430 ORTHO05D009322 9.5e-35 150.2 111 61.3
CSS0032789 Camellia sinensis var. sinensis HOM05D007430 ORTHO05D009322 4.7e-34 147.9 112 63.4
CSS0049466 Camellia sinensis var. sinensis HOM05D007430 ORTHO05D009322 4.7e-34 147.9 112 63.4
Os03g0414400 Oryza sativa ssp. japonica HOM05D007430 ORTHO05D009322 1.0e-33 146.7 110 56.4
Sed0003360 Sechium edule HOM05D007430 ORTHO05D009322 1.8e-33 146.0 107 63.6
Aqoxy3G00539 Aquilegia oxysepala HOM05D007430 ORTHO05D009322 2.3e-33 145.6 109 63.3
Glyma.19G034200 Glycine max HOM05D007430 ORTHO05D009322 2.3e-33 145.6 110 59.1
PSO478G2979 Papaver somniferum HOM05D007430 ORTHO05D009322 2.3e-33 145.6 108 63.0
DCAR_003124 Daucus carota HOM05D007430 ORTHO05D009322 3.0e-33 145.2 106 65.1
ECA238G2295 Erigeron canadensis HOM05D007430 ORTHO05D009322 4.0e-33 144.8 111 59.5
Atru.chr8.658 Acer truncatum HOM05D007430 ORTHO05D009322 6.8e-33 144.1 108 62.0
Phvul.004G041900 Phaseolus vulgaris HOM05D007430 ORTHO05D009322 2.0e-32 142.5 110 60.0
CANSAT64G0392 Cannabis sativa HOM05D007430 ORTHO05D009322 2.6e-32 142.1 108 65.7
Phvul.004G042100 Phaseolus vulgaris HOM05D007430 ORTHO05D009322 2.6e-32 142.1 109 60.6
PSO017G6770 Papaver somniferum HOM05D007430 ORTHO05D009322 3.4e-32 141.7 108 62.0
Actinidia36267 Actinidia chinensis HOM05D007430 ORTHO05D009322 4.4e-32 141.4 109 61.5
CsaV3_4G010120 Cucumis sativus L. HOM05D007430 ORTHO05D009322 4.4e-32 141.4 107 60.7
HanXRQChr14g0452451 Helianthus annuus HOM05D007430 ORTHO05D009322 5.7e-32 141.0 109 60.6
EL10Ac8g20552 Beta vulgaris HOM05D007430 ORTHO05D009322 9.8e-32 140.2 107 62.6
MELO3C032688.2 Cucumis melo HOM05D007430 ORTHO05D009322 1.3e-31 139.8 107 60.7
FvH4_6g46430 Fragaria vesca HOM05D007430 ORTHO05D009322 2.2e-31 139.0 99 68.7
VMungo0464G1827 Vigna mungo HOM05D007430 ORTHO05D009322 2.2e-31 139.0 110 58.2
Cc01_g15140 Coffea canephora HOM05D007430 ORTHO05D009322 2.8e-31 138.7 108 59.3
AUR62023164 Chenopodium quinoa HOM05D007430 ORTHO05D009322 8.3e-31 137.1 107 63.6
MBI16_g22331_MAGBIO Magnolia biondii HOM05D007430 ORTHO05D009322 8.3e-31 137.1 111 61.3
Sc10g0000620 Simmondsia chinensis HOM05D007430 ORTHO05D009322 1.4e-30 136.3 110 56.4
ClCG07G016000 Citrullus lanatus HOM05D007430 ORTHO05D009322 3.1e-30 135.2 107 58.9
Lsat_1_v5_gn_2_89680 Lactuca sativa HOM05D007430 ORTHO05D009322 7.0e-30 134.0 109 59.6
PGSC0003DMG400006148 Solanum tuberosum HOM05D007430 ORTHO05D009322 3.5e-29 131.7 108 63.0
Hund13678 Selenicereus undatus HOM05D007430 ORTHO05D009322 4.5e-29 131.3 108 58.3
SGA_v2.0_scaffold148G36438 Striga asiatica HOM05D007430 ORTHO05D009322 4.5e-29 131.3 106 59.4
vmacro05615 Vaccinium macrocarpon HOM05D007430 ORTHO05D009322 7.8e-29 130.6 111 56.8
AUR62009486 Chenopodium quinoa HOM05D007430 ORTHO05D009322 1.3e-28 129.8 107 60.7
CAN.G854.12 Capsicum annuum HOM05D007430 ORTHO05D009322 8.6e-28 127.1 107 59.8
Oeu007080.1 Olea europaea HOM05D007430 ORTHO05D009322 8.6e-28 127.1 112 58.0
Sopen07g024280 Solanum pennellii HOM05D007430 ORTHO05D009322 8.6e-28 127.1 108 61.1
Migut.O00383 Erythranthe guttata HOM05D007430 ORTHO05D009322 3.3e-27 125.2 106 57.5
Solyc07g047840.2 Solanum lycopersicum HOM05D007430 ORTHO05D009322 5.6e-27 124.4 108 60.2
MSTRG.3403 Avicennia marina HOM05D007430 ORTHO05D009322 1.2e-26 123.2 108 55.6
Duzib133G1191 Durio zibethinus HOM05D007430 ORTHO05D009322 1.6e-26 122.9 82 68.3
Aa31LG11G13770 Aethionema arabicum HOM05D007430 ORTHO05D009322 2.8e-26 122.1 108 52.8
ATR0559G319 Amborella trichopoda HOM05D007430 ORTHO05D009322 4.7e-26 121.3 109 56.0
FAN02G0166 Fragaria x ananassa HOM05D007430 ORTHO05D009322 6.1e-26 120.9 99 62.6
Duzib138G1572 Durio zibethinus HOM05D007430 ORTHO05D009322 2.3e-25 119.0 126 48.4
HPP92_007986 Vanilla planifolia HOM05D007430 ORTHO05D009322 5.2e-25 117.9 101 55.4
THA.LOC104820974 Tarenaya hassleriana HOM05D007430 ORTHO05D009322 1.2e-24 116.7 108 50.9
CARHR197520 Cardamine hirsuta HOM05D007430 ORTHO05D009322 1.5e-24 116.3 108 51.9
AL6G26650 Arabidopsis lyrata HOM05D007430 ORTHO05D009322 3.4e-24 115.2 108 50.9
AT5G15802 Arabidopsis thaliana HOM05D007430 ORTHO05D009322 3.4e-24 115.2 108 50.9
Thhalv10015108m.g Eutrema salsugineum HOM05D007430 ORTHO05D009322 2.2e-23 112.5 108 50.0
C09p61270 Brassica napus HOM05D007430 ORTHO05D009322 1.1e-22 110.2 108 48.1
A10p23220 Brassica napus HOM05D007430 ORTHO05D009322 1.4e-22 109.8 108 48.1
BraA10t44390Z Brassica rapa HOM05D007430 ORTHO05D009322 1.4e-22 109.8 108 48.1
MD09G1073800 Malus domestica HOM05D007430 ORTHO05D009322 1.4e-22 109.8 69 76.8
SalBow1G0910 Salvia bowleyana HOM05D000293 ORTHO05D000180 1.4e-22 109.8 104 55.8
CDE09G0787 Ceratophyllum demersum HOM05D007430 ORTHO05D009322 1.8e-22 109.4 111 55.9
BcaC04g18935 Brassica carinata HOM05D007430 ORTHO05D009322 3.2e-22 108.6 108 47.2
BolC9t58969H Brassica oleracea HOM05D007430 ORTHO05D009322 3.2e-22 108.6 108 47.2
unitig_32.g10757 Utricularia gibba HOM05D000600 ORTHO05D000432 9.2e-22 107.1 114 49.1
MBI16_g39931_MAGBIO Magnolia biondii HOM05D007430 ORTHO05D009322 1.0e-20 103.6 111 50.5
Carub.0006s1396 Capsella rubella HOM05D007430 ORTHO05D009322 6.6e-20 100.9 108 45.4
Sp6g28310 Schrenkiella parvula HOM05D007430 ORTHO05D009322 6.6e-20 100.9 108 48.1
Psat1g066840 Pisum sativum HOM05D007430 ORTHO05D009322 3.3e-19 98.6 69 71.0
SEGI_38988 Sequoiadendron giganteum HOM05D007430 ORTHO05D009322 4.3e-19 98.2 106 45.3
Nitab4.5_0009877g0030 Nicotiana tabacum HOM05D007430 ORTHO05D009322 1.6e-18 96.3 78 61.5
CDE02G4259 Ceratophyllum demersum HOM05D007430 ORTHO05D009322 6.2e-18 94.4 81 58.0
Nitab4.5_0000441g0090 Nicotiana tabacum HOM05D007430 ORTHO05D009322 1.8e-17 92.8 69 68.1
AagrBONN_evm.TU.Sc2ySwM_228.315 Anthoceros agrestis HOM05D007430 ORTHO05D009322 5.8e-16 87.8 107 39.3
Mapoly0015s0072 Marchantia polymorpha HOM05D007430 ORTHO05D009322 2.4e-14 82.4 107 40.2
Pp3c7_870 Physcomitrium patens HOM05D007430 ORTHO05D009322 1.2e-13 80.1 106 35.8
COL.COLO4_08471 Corchorus olitorius HOM05D007430 ORTHO05D009322 1.2e-08 63.5 37 83.8
Rhsim10G0056400 Rhododendron simsii HOM05D007430 ORTHO05D009322 7.1e-06 54.3 40 67.5


User provided reference genes

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