Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.02G055100 Manihot esculenta HOM05D006882 ORTHO05D008688 1.2e-53 213.0 116 100.0
Manes.01G096000 Manihot esculenta HOM05D006882 ORTHO05D008688 2.4e-33 145.6 109 73.4
Potri.017G094200 Populus trichocarpa HOM05D006882 ORTHO05D008688 9.1e-25 117.1 109 56.0
CiPaw.03G088500 Carya illinoinensis HOM05D006882 ORTHO05D008688 2.2e-23 112.5 114 54.4
Sabra17G0083000 Salix brachista HOM05D006882 ORTHO05D008688 3.2e-22 108.6 105 55.2
Dinv34941 Davidia involucrata HOM05D006882 ORTHO05D008688 7.2e-22 107.5 107 54.2
PGR004G1649 Punica granatum HOM05D006882 ORTHO05D008688 1.2e-21 106.7 115 52.2
MD09G1066800 Malus domestica HOM05D006882 ORTHO05D008688 2.1e-21 105.9 112 50.9
QL02p067584 Quercus lobata HOM05D006882 ORTHO05D008688 4.7e-21 104.8 106 53.8
COL.COLO4_04934 Corchorus olitorius HOM05D006882 ORTHO05D008688 6.1e-21 104.4 116 51.7
MD17G1059700 Malus domestica HOM05D006882 ORTHO05D008688 8.0e-21 104.0 112 50.9
Haze_14430 Corylus avellana HOM05D006882 ORTHO05D008688 1.0e-20 103.6 114 51.8
Thecc.04G095700 Theobroma cacao HOM05D006882 ORTHO05D008688 1.4e-20 103.2 103 57.3
Potri.004G120200 Populus trichocarpa HOM05D006882 ORTHO05D008688 3.0e-20 102.1 148 42.6
GSVIVG01032906001 Vitis vinifera HOM05D006882 ORTHO05D008688 5.2e-20 101.3 115 53.0
Cfa007668 Carpinus fangiana HOM05D006882 ORTHO05D008688 1.5e-19 99.8 114 50.9
Atru.chr8.430 Acer truncatum HOM05D006882 ORTHO05D008688 3.4e-19 98.6 106 55.7
Duzib187G0261 Durio zibethinus HOM05D006882 ORTHO05D008688 4.4e-19 98.2 111 52.3
RcHm_v2.0_Chr2g0165841 Rosa chinensis HOM05D006882 ORTHO05D008688 2.2e-18 95.9 100 54.0
TAR371G1018 Trochodendron aralioides HOM05D006882 ORTHO05D008688 4.8e-18 94.7 106 50.9
Duzib147G0673 Durio zibethinus HOM05D006882 ORTHO05D008688 1.1e-17 93.6 107 52.3
Duzib264G0735 Durio zibethinus HOM05D006882 ORTHO05D008688 1.1e-17 93.6 99 54.5
Prupe.3G254900 Prunus persica HOM05D006882 ORTHO05D008688 1.8e-17 92.8 109 53.2
Glyma.13G056500 Glycine max HOM05D006882 ORTHO05D008688 3.1e-17 92.0 102 51.0
Hma1.2p1_0481F.1_g162213 Hydrangea macrophylla HOM05D006882 ORTHO05D008688 5.3e-17 91.3 107 48.6
Cc07_g04230 Coffea canephora HOM05D006882 ORTHO05D008688 7.0e-17 90.9 117 48.7
FAN05G2472 Fragaria x ananassa HOM05D006882 ORTHO05D008688 1.6e-16 89.7 110 50.9
TPR.G10007 Trifolium pratense HOM05D006882 ORTHO05D008688 1.6e-16 89.7 110 49.1
Phvul.004G037300 Phaseolus vulgaris HOM05D006882 ORTHO05D008688 2.0e-16 89.4 107 45.8
Eucgr.I02034 Eucalyptus grandis HOM05D006882 ORTHO05D008688 4.5e-16 88.2 90 57.8
Glyma.01G085200 Glycine max HOM05D006882 ORTHO05D008688 5.9e-16 87.8 104 46.2
Glyma.19G030100 Glycine max HOM05D006882 ORTHO05D008688 5.9e-16 87.8 105 45.7
FvH4_6g46850 Fragaria vesca HOM05D006882 ORTHO05D008688 1.0e-15 87.0 101 52.5
Lalb_Chr06g0174961 Lupinus albus HOM05D006882 ORTHO05D008688 1.0e-15 87.0 103 49.5
VMungo0464G1672 Vigna mungo HOM05D006882 ORTHO05D008688 1.3e-15 86.7 105 45.7
FAN14G0989 Fragaria x ananassa HOM05D006882 ORTHO05D008688 1.7e-15 86.3 101 52.5
Gorai.007G082700 Gossypium raimondii HOM05D006882 ORTHO05D008688 1.7e-15 86.3 82 58.5
Gohir.A11G072700 Gossypium hirsutum HOM05D006882 ORTHO05D008688 2.2e-15 85.9 106 50.0
Gohir.D11G077000 Gossypium hirsutum HOM05D006882 ORTHO05D008688 2.2e-15 85.9 82 57.3
Rhsim10G0049600 Rhododendron simsii HOM05D006882 ORTHO05D008688 2.2e-15 85.9 108 49.1
THA.LOC104822332 Tarenaya hassleriana HOM05D006882 ORTHO05D008688 2.9e-15 85.5 111 45.9
vmacro05638 Vaccinium macrocarpon HOM05D006882 ORTHO05D008688 2.9e-15 85.5 113 47.8
Oeu062161.1 Olea europaea HOM05D006882 ORTHO05D008688 5.0e-15 84.7 101 46.5
CANSAT64G2010 Cannabis sativa HOM05D006882 ORTHO05D008688 6.5e-15 84.3 109 48.6
FAN02G1963 Fragaria x ananassa HOM05D006882 ORTHO05D008688 6.5e-15 84.3 100 51.0
FAN09G3572 Fragaria x ananassa HOM05D006882 ORTHO05D008688 8.5e-15 84.0 93 52.7
TWI60G1503 Tripterygium wilfordii HOM05D006882 ORTHO05D008688 8.5e-15 84.0 110 46.4
MSTRG.23884 Avicennia marina HOM05D006882 ORTHO05D008688 1.1e-14 83.6 108 43.5
arahy.Tifrunner.gnm1.ann1.YR6PCG Arachis hypogaea HOM05D006882 ORTHO05D008688 3.2e-14 82.0 107 44.9
Aa31LG5G12650 Aethionema arabicum HOM05D006882 ORTHO05D008688 4.2e-14 81.6 69 62.3
AL3G11350 Arabidopsis lyrata HOM05D006882 ORTHO05D008688 4.2e-14 81.6 117 43.6
Dinv33828 Davidia involucrata HOM05D006882 ORTHO05D008688 4.2e-14 81.6 80 55.0
arahy.Tifrunner.gnm1.ann1.PJ6ZH1 Arachis hypogaea HOM05D006882 ORTHO05D008688 5.5e-14 81.3 107 44.9
Carub.0003s0123 Capsella rubella HOM05D006882 ORTHO05D008688 7.2e-14 80.9 112 44.6
AT3G02120 Arabidopsis thaliana HOM05D006882 ORTHO05D008688 1.6e-13 79.7 122 41.8
Lj2g0004633 Lotus japonicus HOM05D006882 ORTHO05D008688 1.6e-13 79.7 107 43.9
Sc14g0006330 Simmondsia chinensis HOM05D006882 ORTHO05D008688 2.7e-13 79.0 113 45.1
Psat1g068840 Pisum sativum HOM05D006882 ORTHO05D008688 3.6e-13 78.6 106 41.5
SalBow1G1386 Salvia bowleyana HOM05D006882 ORTHO05D008688 3.6e-13 78.6 89 46.1
SalBow1G4555 Salvia bowleyana HOM05D006882 ORTHO05D008688 3.6e-13 78.6 89 46.1
Sp3g01180 Schrenkiella parvula HOM05D006882 ORTHO05D008688 4.7e-13 78.2 114 43.9
CARHR076080 Cardamine hirsuta HOM05D006882 ORTHO05D008688 8.0e-13 77.4 115 44.3
Ciclev10013137m.g Citrus clementina HOM05D006882 ORTHO05D008688 1.0e-12 77.0 64 62.5
Ciclev10003470m.g Citrus clementina HOM05D006882 ORTHO05D008688 1.8e-12 76.3 64 60.9
Gohir.D09G008650 Gossypium hirsutum HOM05D006882 ORTHO05D008688 1.8e-12 76.3 88 51.1
TWI34G0355 Tripterygium wilfordii HOM05D006882 ORTHO05D008688 4.0e-12 75.1 118 42.4
DCAR_025431 Daucus carota HOM05D006882 ORTHO05D008688 5.2e-12 74.7 92 50.0
Gorai.006G010400 Gossypium raimondii HOM05D006882 ORTHO05D008688 5.2e-12 74.7 100 47.0
Ciclev10003349m.g Citrus clementina HOM05D006882 ORTHO05D008688 6.8e-12 74.3 64 59.4
Ciclev10027312m.g Citrus clementina HOM05D006882 ORTHO05D008688 6.8e-12 74.3 64 59.4
CsaV3_4G009150 Cucumis sativus L. HOM05D006882 ORTHO05D008688 2.0e-11 72.8 45 71.1
Aqoxy3G00507 Aquilegia oxysepala HOM05D006882 ORTHO05D008688 2.6e-11 72.4 94 47.9
ClCG07G016320 Citrullus lanatus HOM05D006882 ORTHO05D008688 2.6e-11 72.4 42 78.6
BcaB07g32783 Brassica carinata HOM05D006882 ORTHO05D008688 9.8e-11 70.5 107 43.0
Cpa.g.sc14.176 Carica papaya HOM05D006882 ORTHO05D008688 2.2e-10 69.3 106 43.4
Sed0003732 Sechium edule HOM05D006882 ORTHO05D008688 2.2e-10 69.3 65 53.8
BcaC05g27151 Brassica carinata HOM05D006882 ORTHO05D008688 2.8e-10 68.9 76 53.9
C05p30380 Brassica napus HOM05D006882 ORTHO05D008688 2.8e-10 68.9 76 53.9
BolC5t31777H Brassica oleracea HOM05D006882 ORTHO05D008688 2.8e-10 68.9 76 53.9
Medtr6g015260 Medicago truncatula HOM05D006882 ORTHO05D008688 4.8e-10 68.2 67 52.2
Nitab4.5_0003841g0040 Nicotiana tabacum HOM05D006882 ORTHO05D008688 4.8e-10 68.2 118 44.1
Hund13139 Selenicereus undatus HOM05D006882 ORTHO05D008688 4.8e-10 68.2 63 57.1
A09p35030 Brassica napus HOM05D006882 ORTHO05D008688 8.3e-10 67.4 105 41.9
BraA09t39034Z Brassica rapa HOM05D006882 ORTHO05D008688 8.3e-10 67.4 105 41.9
Medtr6g015280 Medicago truncatula HOM05D006882 ORTHO05D008688 8.3e-10 67.4 64 56.2
AUR62038673 Chenopodium quinoa HOM05D006882 ORTHO05D008688 1.1e-09 67.0 78 51.3
Gohir.A09G009600 Gossypium hirsutum HOM05D006882 ORTHO05D008688 1.1e-09 67.0 98 44.9
PGSC0003DMG400001358 Solanum tuberosum HOM05D006882 ORTHO05D008688 1.1e-09 67.0 68 54.4
Ah.12g062710 Amaranthus hybridus HOM05D006882 ORTHO05D008688 2.4e-09 65.9 64 54.7
Ca_04305_v3 Cicer arietinum L. HOM05D006882 ORTHO05D008688 2.4e-09 65.9 105 42.9
CsaV3_5G014380 Cucumis sativus L. HOM05D006882 ORTHO05D008688 4.1e-09 65.1 80 46.2
AUR62018188 Chenopodium quinoa HOM05D006882 ORTHO05D008688 9.1e-09 63.9 78 48.7
MSTRG.2998 Avicennia marina HOM05D006882 ORTHO05D008688 1.2e-08 63.5 107 43.9
Peaxi162Scf00166g00424 Petunia axillaris HOM05D006882 ORTHO05D008688 1.2e-08 63.5 77 50.6
Migut.H00624 Erythranthe guttata HOM05D006882 ORTHO05D008688 1.6e-08 63.2 83 42.2
MBI16_g10826_MAGBIO Magnolia biondii HOM05D006882 ORTHO05D008688 1.6e-08 63.2 82 47.6
ATR0177G043 Amborella trichopoda HOM05D006882 ORTHO05D008688 2.0e-08 62.8 72 51.4
ECA238G0863 Erigeron canadensis HOM05D006882 ORTHO05D008688 5.9e-08 61.2 70 51.4
Lsat_1_v5_gn_2_90100 Lactuca sativa HOM05D006882 ORTHO05D008688 1.3e-07 60.1 85 44.7
Nn1g08730 Nelumbo nucifera HOM05D006882 ORTHO05D008688 1.3e-07 60.1 59 52.5
Solyc02g088830.4 Solanum lycopersicum HOM05D006882 ORTHO05D008688 5.0e-07 58.2 59 54.2
Sopen02g033540 Solanum pennellii HOM05D006882 ORTHO05D008688 5.0e-07 58.2 59 54.2
HanXRQChr07g0199771 Helianthus annuus HOM05D006882 ORTHO05D008688 6.6e-07 57.8 72 43.1
Mapoly0103s0008 Marchantia polymorpha HOM05D022139 ORTHO05D008688 1.1e-06 57.0 64 48.4


User provided reference genes

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