Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.02G051500 Manihot esculenta HOM05D007093 ORTHO05D008910 3.7e-290 1001.1 617 100.0
Potri.017G090500 Populus trichocarpa HOM05D007093 ORTHO05D008910 6.1e-168 595.1 642 65.6
Dinv11483 Davidia involucrata HOM05D007093 ORTHO05D008910 1.9e-161 573.5 619 61.2
Atru.chr6.1376 Acer truncatum HOM05D007093 ORTHO05D008910 8.2e-157 558.1 615 61.0
Ciclev10011344m.g Citrus clementina HOM05D007093 ORTHO05D008910 3.8e-154 549.3 612 60.8
Haze_14367 Corylus avellana HOM05D007093 ORTHO05D008910 8.3e-141 505.0 609 57.3
Cfa007712 Carpinus fangiana HOM05D007093 ORTHO05D008910 2.4e-140 503.4 525 62.9
Sabra17G0079700 Salix brachista HOM05D007093 ORTHO05D008910 1.6e-136 490.7 581 59.9
TWI60G1187 Tripterygium wilfordii HOM05D007093 ORTHO05D008910 5.2e-135 485.7 616 52.8
CSS0026118 Camellia sinensis var. sinensis HOM05D007093 ORTHO05D008910 8.8e-135 485.0 616 54.5
MD09G1077000 Malus domestica HOM05D007093 ORTHO05D008910 3.4e-134 483.0 520 65.8
CiPaw.04G051100 Carya illinoinensis HOM05D007093 ORTHO05D008910 4.4e-134 482.6 617 55.6
TAR622G0743 Trochodendron aralioides HOM05D007093 ORTHO05D008910 5.7e-134 482.3 502 66.1
QL09p029458 Quercus lobata HOM05D007093 ORTHO05D008910 1.3e-133 481.1 625 56.0
FAN09G1105 Fragaria x ananassa HOM05D007093 ORTHO05D008910 4.9e-133 479.2 519 63.6
FAN02G0988 Fragaria x ananassa HOM05D007093 ORTHO05D008910 1.6e-131 474.2 519 63.0
RcHm_v2.0_Chr2g0164431 Rosa chinensis HOM05D007093 ORTHO05D008910 3.5e-131 473.0 527 63.0
Gorai.006G011900 Gossypium raimondii HOM05D007093 ORTHO05D008910 1.7e-130 470.7 471 72.2
FvH4_6g46090 Fragaria vesca HOM05D007093 ORTHO05D008910 2.9e-130 469.9 521 63.1
Gohir.D09G010300 Gossypium hirsutum HOM05D007093 ORTHO05D008910 6.6e-130 468.8 471 71.1
FAN05G3563 Fragaria x ananassa HOM05D007093 ORTHO05D008910 1.1e-129 468.0 519 63.8
Gohir.A09G011300 Gossypium hirsutum HOM05D007093 ORTHO05D008910 2.5e-129 466.8 478 70.1
CANSAT64G0836 Cannabis sativa HOM05D007093 ORTHO05D008910 2.3e-127 460.3 596 57.2
Cpa.g.sc14.149 Carica papaya HOM05D007093 ORTHO05D008910 2.0e-126 457.2 542 62.2
QL09p029436 Quercus lobata HOM05D007093 ORTHO05D008910 2.0e-126 457.2 623 50.9
PSO478G5205 Papaver somniferum HOM05D007093 ORTHO05D008910 7.8e-123 445.3 549 61.2
PSO017G2846 Papaver somniferum HOM05D007093 ORTHO05D008910 2.3e-122 443.7 550 60.4
Rhsim10G0045200 Rhododendron simsii HOM05D007093 ORTHO05D008910 2.3e-122 443.7 607 54.0
Thecc.04G091300 Theobroma cacao HOM05D007093 ORTHO05D008910 2.6e-118 430.3 619 58.0
vmacro19123 Vaccinium macrocarpon HOM05D007093 ORTHO05D008910 1.2e-115 421.4 587 55.4
Sed0021178 Sechium edule HOM05D007093 ORTHO05D008910 3.0e-114 416.8 476 67.4
Thhalv10003982m.g Eutrema salsugineum HOM05D007093 ORTHO05D008910 8.6e-114 415.2 440 66.1
CARHR153970 Cardamine hirsuta HOM05D007093 ORTHO05D008910 4.3e-113 412.9 486 61.1
SalBow1G5933 Salvia bowleyana HOM05D007093 ORTHO05D008910 4.3e-113 412.9 618 52.6
Carub.0005s0800 Capsella rubella HOM05D007093 ORTHO05D008910 1.6e-112 411.0 440 65.2
GSVIVG01011494001 Vitis vinifera HOM05D007093 ORTHO05D008910 4.7e-112 409.5 614 56.5
AT3G29290 Arabidopsis thaliana HOM05D007093 ORTHO05D008910 8.1e-112 408.7 440 66.8
Sp2g17890 Schrenkiella parvula HOM05D007093 ORTHO05D008910 8.1e-112 408.7 440 64.8
MSTRG.3018 Avicennia marina HOM05D007093 ORTHO05D008910 2.3e-111 407.1 543 60.2
PGR042G3371 Punica granatum HOM05D007093 ORTHO05D008910 2.3e-111 407.1 529 61.2
AUR62018158 Chenopodium quinoa HOM05D007093 ORTHO05D008910 3.1e-111 406.8 440 67.3
Duzib147G1133 Durio zibethinus HOM05D007093 ORTHO05D008910 3.1e-111 406.8 620 53.2
AL5G19290 Arabidopsis lyrata HOM05D007093 ORTHO05D008910 5.2e-111 406.0 440 65.2
MELO3C022059.2 Cucumis melo HOM05D007093 ORTHO05D008910 1.5e-110 404.4 531 55.9
Actinidia07826 Actinidia chinensis HOM05D007093 ORTHO05D008910 1.3e-109 401.4 544 59.4
BcaB07g30086 Brassica carinata HOM05D007093 ORTHO05D008910 4.9e-109 399.4 440 64.1
AUR62042568 Chenopodium quinoa HOM05D007093 ORTHO05D008910 8.3e-109 398.7 446 61.9
Peaxi162Scf00166g00640 Petunia axillaris HOM05D007093 ORTHO05D008910 2.4e-108 397.1 547 60.0
Sc10g0003260 Simmondsia chinensis HOM05D007093 ORTHO05D008910 9.2e-108 395.2 621 52.5
Eucgr.J01427 Eucalyptus grandis HOM05D007093 ORTHO05D008910 2.1e-107 394.0 405 72.8
Nn4g23352 Nelumbo nucifera HOM05D007093 ORTHO05D008910 4.6e-107 392.9 520 56.7
Ah.10g031960 Amaranthus hybridus HOM05D007093 ORTHO05D008910 1.1e-105 388.3 465 65.6
Prupe.3G247100 Prunus persica HOM05D007093 ORTHO05D008910 2.5e-105 387.1 526 57.0
Zm00001eb008430 Zea mays HOM05D007093 ORTHO05D008910 6.2e-104 382.5 457 60.4
CAN.G206.202 Capsicum annuum HOM05D007093 ORTHO05D008910 6.8e-103 379.0 546 57.0
Sopen02g033330 Solanum pennellii HOM05D007093 ORTHO05D008910 1.2e-102 378.3 549 60.5
Nitab4.5_0000565g0100 Nicotiana tabacum HOM05D007093 ORTHO05D008910 2.2e-101 374.0 546 58.8
Cc07_g04020 Coffea canephora HOM05D007093 ORTHO05D008910 8.4e-101 372.1 575 51.1
DCAR_005548 Daucus carota HOM05D007093 ORTHO05D008910 4.1e-100 369.8 462 56.7
SGA_v2.0_scaffold52G19185 Striga asiatica HOM05D007093 ORTHO05D008910 6.0e-99 365.9 549 55.6
arahy.Tifrunner.gnm1.ann1.H8YVTX Arachis hypogaea HOM05D007093 ORTHO05D008910 1.1e-97 361.7 491 62.9
Migut.H00649 Erythranthe guttata HOM05D007093 ORTHO05D008910 3.3e-97 360.1 542 55.4
Glyma.18G276600 Glycine max HOM05D007093 ORTHO05D008910 3.3e-97 360.1 444 64.4
BcaC06g33684 Brassica carinata HOM05D007093 ORTHO05D008910 9.6e-97 358.6 445 64.9
Lj4A116G82 Lonicera japonica HOM05D007093 ORTHO05D008910 1.2e-96 358.2 385 68.6
Aa31LG10G7310 Aethionema arabicum HOM05D007093 ORTHO05D006741 6.2e-96 355.9 421 68.2
Phvul.008G024300 Phaseolus vulgaris HOM05D007093 ORTHO05D008910 6.2e-96 355.9 436 59.4
C07p38180 Brassica napus HOM05D007093 ORTHO05D008910 1.4e-95 354.8 445 64.7
Lalb_Chr10g0092581 Lupinus albus HOM05D007093 ORTHO05D008910 1.8e-95 354.4 462 64.3
VMungo1383G0771 Vigna mungo HOM05D007093 ORTHO05D008910 1.8e-95 354.4 436 59.2
Medtr7g017610 Medicago truncatula HOM05D007093 ORTHO05D008910 2.4e-95 354.0 463 57.0
ClCG11G005040 Citrullus lanatus HOM05D007093 ORTHO05D008910 6.8e-95 352.4 498 53.4
arahy.Tifrunner.gnm1.ann1.T191C4 Arachis hypogaea HOM05D007093 ORTHO05D008910 8.9e-95 352.1 491 62.1
Lj1g0021235 Lotus japonicus HOM05D007093 ORTHO05D008910 8.9e-95 352.1 443 61.4
Oeu000638.1 Olea europaea HOM05D007093 ORTHO05D008910 1.2e-94 351.7 483 58.6
Ca_06961_v3 Cicer arietinum L. HOM05D007093 ORTHO05D008910 2.0e-94 350.9 462 57.4
Glyma.08G254100 Glycine max HOM05D007093 ORTHO05D008910 3.4e-94 350.1 466 61.2
TPR.G3254 Trifolium pratense HOM05D007093 ORTHO05D008910 2.7e-91 340.5 513 52.2
PGSC0003DMG400001354 Solanum tuberosum HOM05D007093 ORTHO05D008910 7.8e-91 339.0 546 57.5
Nitab4.5_0008213g0020 Nicotiana tabacum HOM05D007093 ORTHO05D008910 1.0e-90 338.6 547 58.1
Psat3g194440 Pisum sativum HOM05D007093 ORTHO05D008910 1.0e-90 338.6 444 55.9
EL10Ac2g03091 Beta vulgaris HOM05D007093 ORTHO05D008910 8.7e-90 335.5 442 61.5
BolC7t44340H Brassica oleracea HOM05D007093 ORTHO05D008910 5.6e-89 332.8 445 59.8
Solyc02g088600.4 Solanum lycopersicum HOM05D007093 ORTHO05D008910 7.3e-89 332.4 549 57.0
ATR0064G018 Amborella trichopoda HOM05D007093 ORTHO05D008910 1.2e-86 325.1 585 50.8
COL.COLO4_21381 Corchorus olitorius HOM05D007093 ORTHO05D008910 5.8e-86 322.8 418 62.7
Lsat_1_v5_gn_2_87781 Lactuca sativa HOM05D007093 ORTHO05D008910 1.6e-83 314.7 490 54.3
C02p55490 Brassica napus HOM05D007093 ORTHO05D008910 1.5e-78 298.1 405 42.7
BolC2t11605H Brassica oleracea HOM05D007093 ORTHO05D008910 1.5e-78 298.1 405 42.7
unitig_899.g15158 Utricularia gibba HOM05D007093 ORTHO05D008910 1.3e-74 285.0 465 37.4
ECA238G1523 Erigeron canadensis HOM05D007093 ORTHO05D008910 6.7e-74 282.7 442 49.5
THA.LOC104805501 Tarenaya hassleriana HOM05D007093 ORTHO05D008910 1.5e-73 281.6 509 54.0
A06p39990 Brassica napus HOM05D007093 ORTHO05D008910 2.9e-69 267.3 441 54.4
BraA06t26914Z Brassica rapa HOM05D007093 ORTHO05D008910 2.9e-69 267.3 441 54.4
HanXRQChr07g0199471 Helianthus annuus HOM05D007093 ORTHO05D008910 2.7e-67 260.8 389 56.0
CsaV3_5G038790 Cucumis sativus L. HOM05D007093 ORTHO05D008910 2.3e-58 231.1 460 50.2
SEGI_28807 Sequoiadendron giganteum HOM05D007093 ORTHO05D008910 8.7e-58 229.2 429 50.6
C02p55430 Brassica napus HOM05D007093 ORTHO05D008910 3.7e-56 223.8 355 38.6
BolC2t11599H Brassica oleracea HOM05D007093 ORTHO05D008910 3.7e-56 223.8 355 38.6
CDE10G0932 Ceratophyllum demersum HOM05D007093 ORTHO05D008910 7.2e-52 209.5 180 56.1
Os03g0211600 Oryza sativa ssp. japonica HOM05D007093 ORTHO05D008910 8.8e-50 202.6 180 55.6
Zm00001eb408510 Zea mays HOM05D007093 ORTHO05D008910 8.2e-48 196.1 180 53.3
BcaC03g17570 Brassica carinata HOM05D007093 ORTHO05D008910 4.7e-43 180.3 315 36.8
RcHm_v2.0_Chr2g0164471 Rosa chinensis HOM05D007093 ORTHO05D008910 1.5e-36 158.7 195 46.7
A02p36520 Brassica napus HOM05D007093 ORTHO05D008910 2.0e-14 85.1 112 40.2
BraA02t08648Z Brassica rapa HOM05D007093 ORTHO05D008910 2.0e-14 85.1 112 40.2
Eucgr.K03209 Eucalyptus grandis HOM05D000855 ORTHO05D008530 3.0e-10 71.2 169 28.4
Cfa017505 Carpinus fangiana HOM05D000855 ORTHO05D008530 3.4e-09 67.8 168 26.8
Haze_20657 Corylus avellana HOM05D000855 ORTHO05D008530 3.4e-09 67.8 168 26.8
Phvul.001G001200 Phaseolus vulgaris HOM05D005833 ORTHO05D008135 7.5e-09 66.6 155 25.2
Hund13165 Selenicereus undatus HOM05D007093 ORTHO05D008910 7.5e-09 66.6 48 66.7
SMO364G0448 Selaginella moellendorffii HOM05D007093 ORTHO05D008910 1.3e-08 65.9 146 30.8
QL07p045308 Quercus lobata HOM05D000855 ORTHO05D008530 1.7e-08 65.5 180 25.6
AagrBONN_evm.TU.Sc2ySwM_228.2947 Anthoceros agrestis HOM05D000001 ORTHO05D000003 2.9e-08 64.7 140 30.7
QL09p032747 Quercus lobata HOM05D000424 ORTHO05D000355 1.4e-07 62.4 162 27.2
Atru.chr3.1624 Acer truncatum HOM05D007128 ORTHO05D009059 3.2e-07 61.2 153 26.8
Ah.01g003360 Amaranthus hybridus HOM05D000001 ORTHO05D000003 3.2e-07 61.2 162 27.8
CARHR129270 Cardamine hirsuta HOM05D006866 ORTHO05D008689 3.2e-07 61.2 141 29.8
Sopen02g025900 Solanum pennellii HOM05D007128 ORTHO05D009059 3.2e-07 61.2 128 28.9
AagrBONN_evm.TU.Sc2ySwM_368.547 Anthoceros agrestis HOM05D007093 ORTHO05D008910 5.4e-07 60.5 135 28.1
MBI04_g31965_MAGBIO Magnolia biondii HOM05D004783 ORTHO05D005581 5.4e-07 60.5 136 29.4
MBI04_g31977_MAGBIO Magnolia biondii HOM05D004783 ORTHO05D005581 5.4e-07 60.5 136 29.4
PGSC0003DMG400016718 Solanum tuberosum HOM05D007128 ORTHO05D009059 5.4e-07 60.5 128 28.9
Atru.BG.218.p Acer truncatum HOM05D000855 ORTHO05D008530 7.0e-07 60.1 151 25.8
AagrBONN_evm.TU.Sc2ySwM_362.1424 Anthoceros agrestis HOM05D000001 ORTHO05D000003 7.0e-07 60.1 140 29.3
C02p07450 Brassica napus HOM05D000424 ORTHO05D000355 7.0e-07 60.1 161 25.5
BolC2t06676H Brassica oleracea HOM05D000424 ORTHO05D000355 7.0e-07 60.1 161 25.5
CARHR265780 Cardamine hirsuta HOM05D000001 ORTHO05D000003 9.2e-07 59.7 163 23.9
Aa31LG11G14510 Aethionema arabicum HOM05D000424 ORTHO05D000355 1.2e-06 59.3 193 23.8
Cc03_g13390 Coffea canephora HOM05D007128 ORTHO05D009059 1.2e-06 59.3 142 26.8
Glyma.18G276500 Glycine max HOM05D004127 ORTHO05D005119 1.6e-06 58.9 139 25.9
HanXRQChr14g0428311 Helianthus annuus HOM05D005833 ORTHO05D008135 1.6e-06 58.9 160 23.8
BcaC03g13436 Brassica carinata HOM05D000424 ORTHO05D000355 2.0e-06 58.5 161 24.2
Medtr2g007030 Medicago truncatula HOM05D007322 ORTHO05D009029 2.0e-06 58.5 159 25.2
BcaC05g24974 Brassica carinata HOM05D007322 ORTHO05D009029 2.7e-06 58.2 129 27.1
Ciclev10027602m.g Citrus clementina HOM05D000001 ORTHO05D009948 2.7e-06 58.2 153 26.8
BraA06t23970Z Brassica rapa HOM05D007322 ORTHO05D009029 3.5e-06 57.8 129 27.1
CSS0003119 Camellia sinensis var. sinensis HOM05D007128 ORTHO05D009059 3.5e-06 57.8 138 26.8
Glyma.16G043600 Glycine max HOM05D000424 ORTHO05D000355 3.5e-06 57.8 100 32.0
Lj7A250T23 Lonicera japonica HOM05D002986 ORTHO05D007611 3.5e-06 57.8 128 31.2
Psat2g189360 Pisum sativum HOM05D007128 ORTHO05D009059 3.5e-06 57.8 136 25.0
VMungo0647G1167 Vigna mungo HOM05D005833 ORTHO05D008135 3.5e-06 57.8 155 23.9
BcaNung04765 Brassica carinata HOM05D007322 ORTHO05D009029 4.6e-06 57.4 142 26.1
Haze_00709 Corylus avellana HOM05D007128 ORTHO05D009059 4.6e-06 57.4 138 26.8
Thhalv10011454m.g Eutrema salsugineum HOM05D002453 ORTHO05D008746 4.6e-06 57.4 152 28.3
TWI38G2031 Tripterygium wilfordii HOM05D007128 ORTHO05D009059 4.6e-06 57.4 157 27.4
Aa31LG3G2070 Aethionema arabicum HOM05D000855 ORTHO05D008530 5.9e-06 57.0 161 24.2
Solyc03g114920.1 Solanum lycopersicum HOM05D005362 ORTHO05D006895 5.9e-06 57.0 135 27.4
PGSC0003DMG400024629 Solanum tuberosum HOM05D005362 ORTHO05D006895 5.9e-06 57.0 135 27.4
Carub.0004s1681 Capsella rubella HOM05D006866 ORTHO05D008689 7.8e-06 56.6 141 27.0
CAN.G1681.10 Capsicum annuum HOM05D007128 ORTHO05D009059 7.8e-06 56.6 128 29.7
Cfa015785 Carpinus fangiana HOM05D007128 ORTHO05D009059 7.8e-06 56.6 138 26.1
Oeu061587.1 Olea europaea HOM05D007128 ORTHO05D009059 7.8e-06 56.6 138 25.4
Sabra01G0032600 Salix brachista HOM05D005833 ORTHO05D008135 7.8e-06 56.6 141 28.4
Solyc03g111210.4 Solanum lycopersicum HOM05D000001 ORTHO05D000003 7.8e-06 56.6 162 25.9


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