Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.02G049900 Manihot esculenta HOM05D006813 ORTHO05D008657 1.5e-236 822.4 406 100.0
Potri.004G120900 Populus trichocarpa HOM05D006813 ORTHO05D008657 1.4e-181 639.8 409 79.7
TWI34G0739 Tripterygium wilfordii HOM05D006813 ORTHO05D008657 5.0e-179 631.3 406 78.6
TWI34G0213 Tripterygium wilfordii HOM05D006813 ORTHO05D008657 3.3e-178 628.6 406 78.8
Sabra04G0067300 Salix brachista HOM05D006813 ORTHO05D008657 3.6e-177 625.2 407 77.9
QL02p085115 Quercus lobata HOM05D006813 ORTHO05D008657 1.1e-170 603.6 416 75.0
CSS0034099 Camellia sinensis var. sinensis HOM05D006813 ORTHO05D008657 3.4e-167 592.0 393 74.0
Haze_14484 Corylus avellana HOM05D006813 ORTHO05D008657 7.5e-167 590.9 411 72.7
Cfa007604 Carpinus fangiana HOM05D006813 ORTHO05D008657 8.3e-166 587.4 411 72.7
Ciclev10013781m.g Citrus clementina HOM05D006813 ORTHO05D008657 3.5e-164 582.0 405 72.8
Thecc.04G088600 Theobroma cacao HOM05D006813 ORTHO05D008657 6.0e-164 581.3 406 71.9
ClCG11G004590 Citrullus lanatus HOM05D006813 ORTHO05D008657 1.3e-163 580.1 410 72.4
Nn4g23302 Nelumbo nucifera HOM05D006813 ORTHO05D008657 1.9e-162 576.2 406 70.2
THA.LOC104805490 Tarenaya hassleriana HOM05D006813 ORTHO05D008657 3.3e-162 575.5 354 77.1
Actinidia06110 Actinidia chinensis HOM05D006813 ORTHO05D008657 7.3e-162 574.3 403 71.7
Gorai.012G051400 Gossypium raimondii HOM05D006813 ORTHO05D008657 2.1e-161 572.8 408 72.1
Gohir.D04G046200 Gossypium hirsutum HOM05D006813 ORTHO05D008657 2.8e-161 572.4 408 72.1
Atru.chr8.345 Acer truncatum HOM05D006813 ORTHO05D008657 3.1e-160 568.9 406 70.9
PGR004G2573 Punica granatum HOM05D006813 ORTHO05D008657 6.8e-160 567.8 417 68.8
Sc14g0006120 Simmondsia chinensis HOM05D006813 ORTHO05D008657 2.0e-159 566.2 404 70.3
MELO3C022015.2 Cucumis melo HOM05D006813 ORTHO05D008657 3.4e-159 565.5 412 70.4
Gohir.A05G369200 Gossypium hirsutum HOM05D006813 ORTHO05D008657 3.4e-159 565.5 407 71.0
CsaV3_5G038340 Cucumis sativus L. HOM05D006813 ORTHO05D008657 1.3e-158 563.5 412 69.7
CiPaw.03G021100 Carya illinoinensis HOM05D006813 ORTHO05D008657 1.9e-157 559.7 419 68.5
CSS0013443 Camellia sinensis var. sinensis HOM05D006813 ORTHO05D008657 4.1e-157 558.5 406 69.2
TAR371G1040 Trochodendron aralioides HOM05D006813 ORTHO05D008657 4.1e-157 558.5 375 72.5
Nitab4.5_0001591g0010 Nicotiana tabacum HOM05D006813 ORTHO05D008657 1.0e-155 553.9 366 71.9
Duzib264G0095 Durio zibethinus HOM05D006813 ORTHO05D008657 1.3e-155 553.5 406 69.5
Lalb_Chr02g0159111 Lupinus albus HOM05D006813 ORTHO05D008657 1.3e-155 553.5 340 77.9
FvH4_6g47790 Fragaria vesca HOM05D006813 ORTHO05D008657 2.3e-155 552.7 408 69.6
FAN14G3538 Fragaria x ananassa HOM05D006813 ORTHO05D008657 2.3e-155 552.7 408 69.6
Nitab4.5_0000568g0240 Nicotiana tabacum HOM05D006813 ORTHO05D008657 2.3e-155 552.7 364 71.7
EL10Ac2g03036 Beta vulgaris HOM05D006813 ORTHO05D008657 8.6e-155 550.8 410 69.3
Glyma.19G026800 Glycine max HOM05D006813 ORTHO05D008657 1.9e-154 549.7 349 75.4
MD09G1056700 Malus domestica HOM05D006813 ORTHO05D008657 2.5e-154 549.3 411 67.9
CANSAT64G1527 Cannabis sativa HOM05D006813 ORTHO05D008657 4.3e-154 548.5 423 67.6
Aqoxy3G03517 Aquilegia oxysepala HOM05D006813 ORTHO05D008657 5.6e-154 548.1 340 77.1
arahy.Tifrunner.gnm1.ann1.GGC6H3 Arachis hypogaea HOM05D006813 ORTHO05D008657 7.3e-154 547.7 349 74.2
Glyma.13G060100 Glycine max HOM05D006813 ORTHO05D008657 9.5e-154 547.4 378 71.4
VMungo0464G0720 Vigna mungo HOM05D006813 ORTHO05D008657 1.2e-153 547.0 361 74.8
arahy.Tifrunner.gnm1.ann1.DSSH0H Arachis hypogaea HOM05D006813 ORTHO05D008657 1.6e-153 546.6 349 74.5
AT3G29185 Arabidopsis thaliana HOM05D006813 ORTHO05D008657 2.1e-153 546.2 351 73.2
Phvul.004G032400 Phaseolus vulgaris HOM05D006813 ORTHO05D008657 2.1e-153 546.2 377 72.4
RcHm_v2.0_Chr2g0166981 Rosa chinensis HOM05D006813 ORTHO05D008657 2.1e-153 546.2 407 68.8
GSVIVG01011472001 Vitis vinifera HOM05D006813 ORTHO05D008657 3.6e-153 545.4 395 70.6
Medtr6g013150 Medicago truncatula HOM05D006813 ORTHO05D008657 4.7e-153 545.0 408 68.1
Lj2g0012161 Lotus japonicus HOM05D006813 ORTHO05D008657 1.4e-152 543.5 402 69.9
AL5G19100 Arabidopsis lyrata HOM05D006813 ORTHO05D008657 2.4e-152 542.7 351 73.2
AUR62034457 Chenopodium quinoa HOM05D006813 ORTHO05D008657 5.2e-152 541.6 409 69.4
MBI07_g46965_MAGBIO Magnolia biondii HOM05D006813 ORTHO05D008657 6.8e-152 541.2 340 76.5
Psat1g069960 Pisum sativum HOM05D006813 ORTHO05D008657 6.8e-152 541.2 398 67.8
MSTRG.3341 Avicennia marina HOM05D006813 ORTHO05D008657 1.5e-151 540.0 374 71.1
Actinidia01957 Actinidia chinensis HOM05D006813 ORTHO05D008657 2.0e-151 539.7 400 68.0
CAN.G206.184 Capsicum annuum HOM05D006813 ORTHO05D008657 5.8e-151 538.1 389 68.4
Sp2g17800 Schrenkiella parvula HOM05D006813 ORTHO05D008657 1.3e-150 537.0 403 66.5
Solyc02g088350.4 Solanum lycopersicum HOM05D006813 ORTHO05D008657 4.9e-150 535.0 366 70.2
Sopen02g033040 Solanum pennellii HOM05D006813 ORTHO05D008657 6.4e-150 534.6 366 69.9
C07p38090 Brassica napus HOM05D006813 ORTHO05D008657 1.1e-149 533.9 363 71.6
BolC7t44331H Brassica oleracea HOM05D006813 ORTHO05D008657 1.1e-149 533.9 363 71.6
PGSC0003DMG400001435 Solanum tuberosum HOM05D006813 ORTHO05D008657 1.1e-149 533.9 371 69.3
COL.COLO4_12242 Corchorus olitorius HOM05D006813 ORTHO05D008657 3.2e-149 532.3 317 79.5
SalBow1G5727 Salvia bowleyana HOM05D006813 ORTHO05D008657 7.1e-149 531.2 405 65.9
Thhalv10004355m.g Eutrema salsugineum HOM05D006813 ORTHO05D008657 9.2e-149 530.8 390 67.9
DCAR_025399 Daucus carota HOM05D006813 ORTHO05D008657 1.2e-148 530.4 372 69.1
MD17G1054200 Malus domestica HOM05D006813 ORTHO05D008657 2.7e-148 529.3 438 63.5
Cc07_g03730 Coffea canephora HOM05D006813 ORTHO05D008657 4.6e-148 528.5 402 65.4
Dinv33795 Davidia involucrata HOM05D006813 ORTHO05D008657 1.7e-147 526.6 309 81.2
A06p40070 Brassica napus HOM05D006813 ORTHO05D008657 6.6e-147 524.6 351 72.1
BraA06t26922Z Brassica rapa HOM05D006813 ORTHO05D008657 6.6e-147 524.6 351 72.1
PSO063G1088 Papaver somniferum HOM05D006813 ORTHO05D008657 8.7e-147 524.2 348 73.9
Aa31LG2G4040 Aethionema arabicum HOM05D006813 ORTHO05D008657 1.9e-146 523.1 403 65.5
BcaC06g33677 Brassica carinata HOM05D006813 ORTHO05D008657 1.9e-146 523.1 365 70.1
BcaC06g30887 Brassica carinata HOM05D006813 ORTHO05D008657 3.3e-146 522.3 380 68.7
ATR0730G176 Amborella trichopoda HOM05D006813 ORTHO05D008657 3.6e-145 518.8 339 73.7
Lsat_1_v5_gn_4_170001 Lactuca sativa HOM05D006813 ORTHO05D008657 3.6e-145 518.8 379 67.8
HanXRQChr09g0264041 Helianthus annuus HOM05D006813 ORTHO05D008657 2.4e-144 516.2 388 66.2
PSO063G3583 Papaver somniferum HOM05D006813 ORTHO05D008657 6.9e-144 514.6 346 73.1
Rhsim10G0035200 Rhododendron simsii HOM05D006813 ORTHO05D008657 9.0e-144 514.2 420 62.9
Hund13179 Selenicereus undatus HOM05D006813 ORTHO05D008657 2.0e-143 513.1 423 63.1
ECA232G0359 Erigeron canadensis HOM05D006813 ORTHO05D008657 7.6e-143 511.1 338 71.3
AUR62018125 Chenopodium quinoa HOM05D006813 ORTHO05D008657 1.9e-141 506.5 321 78.2
CDE04G0700 Ceratophyllum demersum HOM05D006813 ORTHO05D008657 7.1e-141 504.6 356 69.1
Peaxi162Scf00166g00933 Petunia axillaris HOM05D006813 ORTHO05D008657 1.2e-140 503.8 318 73.9
vmacro05678 Vaccinium macrocarpon HOM05D006813 ORTHO05D008657 3.5e-140 502.3 411 63.0
HPP92_015887 Vanilla planifolia HOM05D006813 ORTHO05D008657 1.1e-138 497.3 358 67.6
SGA_v2.0_scaffold154G37082 Striga asiatica HOM05D006813 ORTHO05D008657 4.3e-138 495.4 362 68.5
Lju41A8T104 Lonicera japonica HOM05D006813 ORTHO05D008657 7.3e-138 494.6 406 62.1
Zm00001eb057930 Zea mays HOM05D006813 ORTHO05D008657 4.8e-137 491.9 345 70.1
Migut.K01297 Erythranthe guttata HOM05D006813 ORTHO05D008657 6.9e-136 488.0 406 61.6
Os03g0758900 Oryza sativa ssp. japonica HOM05D006813 ORTHO05D008657 9.0e-136 487.6 341 68.3
CARHR152350 Cardamine hirsuta HOM05D006813 ORTHO05D008657 3.5e-132 475.7 355 67.6
TPR.G26959 Trifolium pratense HOM05D006813 ORTHO05D008657 1.8e-128 463.4 296 75.0
Zm00001eb214510 Zea mays HOM05D006813 ORTHO05D008657 6.4e-126 454.9 365 63.3
Oeu023718.1 Olea europaea HOM05D006813 ORTHO05D008657 2.1e-124 449.9 322 68.0
unitig_0.g2631 Utricularia gibba HOM05D004633 ORTHO05D005503 1.3e-123 447.2 360 60.6
Dinv11496 Davidia involucrata HOM05D006813 ORTHO05D008657 3.0e-115 419.5 314 69.1
Carub.0005s0792 Capsella rubella HOM05D006813 ORTHO05D008657 1.3e-113 414.1 256 77.0
Sed0010301 Sechium edule HOM05D006813 ORTHO05D008657 1.6e-113 413.7 248 79.4
Prupe.3G262000 Prunus persica HOM05D006813 ORTHO05D008657 6.3e-113 411.8 248 79.0
SEGI_06128 Sequoiadendron giganteum HOM05D006813 ORTHO05D008657 2.1e-108 396.7 386 52.1
FAN05G4860 Fragaria x ananassa HOM05D006813 ORTHO05D008657 4.3e-106 389.0 355 61.1
Ca_04860_v3 Cicer arietinum L. HOM05D006813 ORTHO05D002040 3.8e-102 375.9 412 51.7
MBI07_g25549_MAGBIO Magnolia biondii HOM05D006813 ORTHO05D008657 3.2e-101 372.9 272 70.2
SalBow1G0723 Salvia bowleyana HOM05D006813 ORTHO05D008657 6.7e-99 365.2 310 61.6
Haze_14493 Corylus avellana HOM05D006813 ORTHO05D008657 1.1e-90 337.8 208 77.4
Mapoly0015s0143 Marchantia polymorpha HOM05D006813 ORTHO05D008657 5.7e-90 335.5 375 44.8
Pp3c27_2000 Physcomitrium patens HOM05D006813 ORTHO05D008657 6.5e-86 322.0 357 42.3
SMO347G0068 Selaginella moellendorffii HOM05D006813 ORTHO05D008657 2.3e-67 260.4 342 37.7
HPP92_015898 Vanilla planifolia HOM05D006813 ORTHO05D008657 8.9e-67 258.5 183 66.1
BcaC06g30885 Brassica carinata HOM05D006813 ORTHO05D008657 9.2e-48 195.3 125 70.4
FAN10G0034 Fragaria x ananassa HOM05D004096 ORTHO05D000898 9.9e-42 175.3 159 57.9
TPR.G26199 Trifolium pratense HOM05D006813 ORTHO05D001332 1.7e-38 164.5 101 76.2
SalBow1G7870 Salvia bowleyana HOM05D006813 ORTHO05D008657 3.0e-38 163.7 91 81.3
MD09G1057100 Malus domestica HOM05D006813 ORTHO05D008657 8.6e-38 162.2 158 53.2
AagrBONN_evm.TU.Sc2ySwM_117.3657 Anthoceros agrestis HOM05D006813 ORTHO05D008657 1.6e-36 157.9 216 40.3
HPP92_015897 Vanilla planifolia HOM05D006813 ORTHO05D008657 6.0e-31 139.4 111 63.1
HanXRQChr08g0223741 Helianthus annuus HOM05D006813 ORTHO05D008657 1.5e-21 108.2 85 61.2
TAR633G2432 Trochodendron aralioides HOM05D006813 ORTHO05D414814 5.4e-16 89.7 136 40.4
ECA247G1425 Erigeron canadensis HOM05D006813 ORTHO05D008657 3.5e-15 87.0 51 70.6
Haze_14448 Corylus avellana HOM05D006813 ORTHO05D008657 8.4e-09 65.9 138 39.9


User provided reference genes

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