Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.02G047166 Manihot esculenta HOM05D008206 ORTHO05D010320 2.5e-37 158.3 81 100.0
Manes.01G092200 Manihot esculenta HOM05D008206 ORTHO05D010320 2.3e-22 108.6 80 72.5
Cpa.g.sc14.94 Carica papaya HOM05D008206 ORTHO05D010320 8.0e-20 100.1 78 65.4
Haze_14514 Corylus avellana HOM05D008206 ORTHO05D010320 3.4e-18 94.7 77 66.2
Thecc.04G083900 Theobroma cacao HOM05D008206 ORTHO05D010320 1.7e-17 92.4 81 63.0
Cfa007572 Carpinus fangiana HOM05D008206 ORTHO05D010320 1.1e-16 89.7 77 63.6
Gohir.A10G100200 Gossypium hirsutum HOM05D008206 ORTHO05D010320 1.1e-16 89.7 82 61.0
CiPaw.04G016300 Carya illinoinensis HOM05D008206 ORTHO05D010320 1.4e-16 89.4 81 59.3
MD09G1052600 Malus domestica HOM05D008206 ORTHO05D010320 3.2e-16 88.2 80 61.2
Potri.004G122800 Populus trichocarpa HOM05D008206 ORTHO05D010320 7.0e-16 87.0 84 63.1
CiPaw.03G025300 Carya illinoinensis HOM05D008206 ORTHO05D010320 9.2e-16 86.7 81 58.0
Thecc.04G084200 Theobroma cacao HOM05D008206 ORTHO05D010320 9.2e-16 86.7 81 60.5
Sabra17G0074600 Salix brachista HOM05D008206 ORTHO05D010320 1.2e-15 86.3 84 60.7
TAR629G1342 Trochodendron aralioides HOM05D008206 ORTHO05D010320 2.7e-15 85.1 78 60.3
GSVIVG01011434001 Vitis vinifera HOM05D008206 ORTHO05D010320 4.6e-15 84.3 81 54.3
Gohir.A11G070300 Gossypium hirsutum HOM05D008206 ORTHO05D010320 1.3e-14 82.8 79 53.2
Potri.017G084700 Populus trichocarpa HOM05D008206 ORTHO05D010320 1.7e-14 82.4 80 61.2
MD00G1125200 Malus domestica HOM05D008206 ORTHO05D010320 2.3e-14 82.0 79 57.0
Gohir.D10G088300 Gossypium hirsutum HOM05D008206 ORTHO05D010320 3.9e-14 81.3 82 57.3
Gorai.011G097200 Gossypium raimondii HOM05D008206 ORTHO05D010320 6.6e-14 80.5 82 54.9
Gohir.D11G074000 Gossypium hirsutum HOM05D008206 ORTHO05D010320 1.9e-13 79.0 79 53.2
Gorai.007G079400 Gossypium raimondii HOM05D008206 ORTHO05D010320 1.9e-13 79.0 79 53.2
Ciclev10013233m.g Citrus clementina HOM05D008206 ORTHO05D010320 4.3e-13 77.8 82 52.4
Prupe.3G266100 Prunus persica HOM05D008206 ORTHO05D010320 5.6e-13 77.4 79 51.9
FvH4_6g48260 Fragaria vesca HOM05D008206 ORTHO05D010320 1.2e-12 76.3 79 53.2
FAN02G1369 Fragaria x ananassa HOM05D008206 ORTHO05D010320 1.2e-12 76.3 79 53.2
FAN05G0177 Fragaria x ananassa HOM05D008206 ORTHO05D010320 1.2e-12 76.3 79 53.2
FAN05G4857 Fragaria x ananassa HOM05D008206 ORTHO05D010320 1.2e-12 76.3 79 53.2
FAN14G5696 Fragaria x ananassa HOM05D008206 ORTHO05D010320 1.6e-12 75.9 79 53.2
FAN09G1639 Fragaria x ananassa HOM05D008206 ORTHO05D010320 3.6e-12 74.7 79 51.9
Gorai.008G139600 Gossypium raimondii HOM05D008206 ORTHO05D010320 6.2e-12 73.9 80 51.2
RcHm_v2.0_Chr2g0167761 Rosa chinensis HOM05D008206 ORTHO05D010320 6.2e-12 73.9 79 53.2
Dinv33772 Davidia involucrata HOM05D008206 ORTHO05D010320 4.4e-10 67.8 88 50.0
Gohir.D12G128666 Gossypium hirsutum HOM05D008206 ORTHO05D010320 9.9e-10 66.6 79 48.1
Nn3g17269 Nelumbo nucifera HOM05D008206 ORTHO05D010320 2.2e-09 65.5 79 50.6
CANSAT64G2007 Cannabis sativa HOM05D008206 ORTHO05D010320 8.3e-09 63.5 82 42.7
Actinidia17551 Actinidia chinensis HOM05D008206 ORTHO05D010320 1.9e-08 62.4 80 51.2
Actinidia26223 Actinidia chinensis HOM05D008206 ORTHO05D010320 2.4e-08 62.0 80 51.2
COL.COLO4_10319 Corchorus olitorius HOM05D008206 ORTHO05D010320 9.2e-08 60.1 53 56.6
Nn4g23199 Nelumbo nucifera HOM05D008206 ORTHO05D010320 2.1e-07 58.9 78 46.2
Gohir.D11G074200 Gossypium hirsutum HOM05D008206 ORTHO05D010320 4.6e-07 57.8 74 43.2
Medtr7g010980 Medicago truncatula HOM05D008206 ORTHO05D010320 1.0e-06 56.6 78 47.4
TPR.G28906 Trifolium pratense HOM05D008206 ORTHO05D010320 1.0e-06 56.6 77 44.2
Sed0002436 Sechium edule HOM05D008206 ORTHO05D010320 3.0e-06 55.1 80 42.5


User provided reference genes

Program Settings