Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.02G044300 Manihot esculenta HOM05D006148 ORTHO05D007955 1.1e-73 280.0 156 100.0
Hma1.2p1_0840F.1_g226570 Hydrangea macrophylla HOM05D006148 ORTHO05D007955 1.9e-54 216.1 155 77.4
TWI15G0129 Tripterygium wilfordii HOM05D006148 ORTHO05D007955 3.7e-53 211.8 156 75.6
Dinv21692 Davidia involucrata HOM05D006148 ORTHO05D007955 4.8e-53 211.5 156 76.3
Duzib068G0643 Durio zibethinus HOM05D006148 ORTHO05D007955 4.0e-52 208.4 156 75.6
Migut.I00620 Erythranthe guttata HOM05D006148 ORTHO05D007955 9.0e-52 207.2 154 72.7
Ciclev10022620m.g Citrus clementina HOM05D006148 ORTHO05D007955 2.0e-51 206.1 161 72.0
Gohir.D12G216200 Gossypium hirsutum HOM05D006148 ORTHO05D007955 9.9e-51 203.8 156 74.4
Gorai.008G231600 Gossypium raimondii HOM05D006148 ORTHO05D007955 9.9e-51 203.8 156 74.4
CSS0033428 Camellia sinensis var. sinensis HOM05D006148 ORTHO05D007955 2.2e-50 202.6 156 75.0
TAR375G0576 Trochodendron aralioides HOM05D006148 ORTHO05D007955 6.4e-50 201.1 154 72.1
Gohir.A12G213600 Gossypium hirsutum HOM05D006148 ORTHO05D007955 8.4e-50 200.7 156 73.1
Atru.chr9.1220 Acer truncatum HOM05D006148 ORTHO05D007955 1.9e-49 199.5 157 72.6
CANSAT21G1845 Cannabis sativa HOM05D006148 ORTHO05D007955 5.5e-49 198.0 156 69.2
Cc02_g08620 Coffea canephora HOM05D006148 ORTHO05D007955 5.5e-49 198.0 156 69.9
Oeu040676.1 Olea europaea HOM05D006148 ORTHO05D007955 5.5e-49 198.0 156 69.9
CiPaw.12G047200 Carya illinoinensis HOM05D006148 ORTHO05D007955 7.1e-49 197.6 139 76.3
Oeu017209.1 Olea europaea HOM05D006148 ORTHO05D007955 7.1e-49 197.6 156 70.5
MSTRG.9371 Avicennia marina HOM05D006148 ORTHO05D007955 9.3e-49 197.2 150 71.3
MBI15_g47175_MAGBIO Magnolia biondii HOM05D006148 ORTHO05D007955 2.7e-48 195.7 148 75.0
MD04G1051900 Malus domestica HOM05D006148 ORTHO05D007955 1.0e-47 193.7 142 76.1
Prupe.5G058400 Prunus persica HOM05D006148 ORTHO05D007955 1.0e-47 193.7 143 75.5
Thecc.03G242700 Theobroma cacao HOM05D006148 ORTHO05D007955 1.0e-47 193.7 173 67.6
ClCG09G012770 Citrullus lanatus HOM05D006148 ORTHO05D007955 1.8e-47 193.0 150 71.3
SGA_v2.0_scaffold377G50308 Striga asiatica HOM05D006148 ORTHO05D007955 2.3e-47 192.6 145 74.5
Aqoxy7G03487 Aquilegia oxysepala HOM05D006148 ORTHO05D007955 3.0e-47 192.2 146 72.6
Eucgr.D02128 Eucalyptus grandis HOM05D006148 ORTHO05D007955 3.0e-47 192.2 150 70.7
Sed0014825 Sechium edule HOM05D006148 ORTHO05D007955 5.1e-47 191.4 150 71.3
Rhsim07G0118900 Rhododendron simsii HOM05D006148 ORTHO05D007955 6.7e-47 191.0 166 68.7
SGA_v2.0_scaffold40G15681 Striga asiatica HOM05D006148 ORTHO05D007955 6.7e-47 191.0 151 72.2
Actinidia10861 Actinidia chinensis HOM05D006148 ORTHO05D007955 1.1e-46 190.3 149 71.1
CSS0030063 Camellia sinensis var. sinensis HOM05D006148 ORTHO05D007955 1.5e-46 189.9 142 74.6
Potri.012G038600 Populus trichocarpa HOM05D006148 ORTHO05D007955 1.9e-46 189.5 167 67.1
MD06G1048200 Malus domestica HOM05D006148 ORTHO05D007955 3.3e-46 188.7 142 73.9
RcHm_v2.0_Chr7g0205301 Rosa chinensis HOM05D006148 ORTHO05D007955 2.1e-45 186.0 141 70.2
Sed0021147 Sechium edule HOM05D006148 ORTHO05D007955 2.1e-45 186.0 155 67.1
vmacro14126 Vaccinium macrocarpon HOM05D006148 ORTHO05D007955 3.7e-45 185.3 160 65.0
unitig_46.g17987 Utricularia gibba HOM05D006148 ORTHO05D007955 6.2e-45 184.5 141 72.3
Nitab4.5_0000506g0080 Nicotiana tabacum HOM05D006148 ORTHO05D007955 1.1e-44 183.7 145 67.6
Nitab4.5_0003456g0030 Nicotiana tabacum HOM05D006148 ORTHO05D007955 1.1e-44 183.7 145 67.6
PGR031G0321 Punica granatum HOM05D006148 ORTHO05D007955 1.4e-44 183.3 148 70.3
Ca_20510_v3 Cicer arietinum L. HOM05D006148 ORTHO05D007955 1.8e-44 183.0 150 68.7
unitig_747.g21320 Utricularia gibba HOM05D006148 ORTHO05D007955 2.4e-44 182.6 140 70.7
CsaV3_3G049830 Cucumis sativus L. HOM05D006148 ORTHO05D007955 3.1e-44 182.2 148 68.9
PGSC0003DMG400026577 Solanum tuberosum HOM05D006148 ORTHO05D007955 3.1e-44 182.2 145 65.5
PGSC0003DMG400026249 Solanum tuberosum HOM05D006148 ORTHO05D007955 4.0e-44 181.8 150 66.0
Psat5g091640 Pisum sativum HOM05D006148 ORTHO05D007955 9.0e-44 180.6 145 67.6
MELO3C003333.2 Cucumis melo HOM05D006148 ORTHO05D007955 1.2e-43 180.3 125 76.0
Rhsim07G0118700 Rhododendron simsii HOM05D006148 ORTHO05D007955 1.5e-43 179.9 145 69.7
Solyc06g060920.3 Solanum lycopersicum HOM05D006148 ORTHO05D007955 2.6e-43 179.1 145 64.8
Solyc08g077970.2 Solanum lycopersicum HOM05D006148 ORTHO05D007955 2.6e-43 179.1 150 65.3
Medtr3g086600 Medicago truncatula HOM05D006148 ORTHO05D007955 5.8e-43 177.9 145 64.8
Phvul.010G018500 Phaseolus vulgaris HOM05D006148 ORTHO05D007955 5.8e-43 177.9 152 65.1
TPR.G30538 Trifolium pratense HOM05D006148 ORTHO05D007955 5.8e-43 177.9 145 66.2
DCAR_005581 Daucus carota HOM05D006148 ORTHO05D007955 7.6e-43 177.6 144 65.3
Glyma.16G092500 Glycine max HOM05D006148 ORTHO05D007955 7.6e-43 177.6 144 66.7
Sopen08g026480 Solanum pennellii HOM05D006148 ORTHO05D007955 7.6e-43 177.6 150 65.3
Sopen06g021070 Solanum pennellii HOM05D006148 ORTHO05D007955 1.3e-42 176.8 145 64.1
CAN.G761.17 Capsicum annuum HOM05D006148 ORTHO05D007955 2.9e-42 175.6 150 63.3
FvH4_5g20230 Fragaria vesca HOM05D006148 ORTHO05D007955 4.9e-42 174.9 141 65.2
FAN13G2154 Fragaria x ananassa HOM05D006148 ORTHO05D007955 1.4e-41 173.3 141 64.5
FAN13G3051 Fragaria x ananassa HOM05D006148 ORTHO05D007955 1.4e-41 173.3 141 64.5
Sabra12G0027000 Salix brachista HOM05D006148 ORTHO05D007955 1.4e-41 173.3 174 60.9
Nitab4.5_0007628g0010 Nicotiana tabacum HOM05D006148 ORTHO05D007955 3.2e-41 172.2 150 64.0
Peaxi162Scf00190g00088 Petunia axillaris HOM05D006148 ORTHO05D007955 4.2e-41 171.8 145 63.4
VMungo0331G0425 Vigna mungo HOM05D006148 ORTHO05D007955 4.2e-41 171.8 144 68.1
COL.COLO4_07508 Corchorus olitorius HOM05D006148 ORTHO05D007955 7.1e-41 171.0 156 64.1
Haze_05448 Corylus avellana HOM05D006148 ORTHO05D007955 9.3e-41 170.6 218 53.2
Lsat_1_v5_gn_3_16181 Lactuca sativa HOM05D006148 ORTHO05D007955 1.2e-40 170.2 152 60.5
Lalb_Chr18g0047251 Lupinus albus HOM05D006148 ORTHO05D007955 1.2e-40 170.2 147 67.3
Lalb_Chr15g0078661 Lupinus albus HOM05D006148 ORTHO05D007955 2.1e-40 169.5 129 69.0
Glyma.09G078400 Glycine max HOM05D006148 ORTHO05D007955 4.6e-40 168.3 113 77.0
Lj3g0001636 Lotus japonicus HOM05D006148 ORTHO05D007955 6.0e-40 167.9 136 68.4
THA.LOC104814463 Tarenaya hassleriana HOM05D006148 ORTHO05D007955 2.3e-39 166.0 156 59.6
CDE04G1348 Ceratophyllum demersum HOM05D006148 ORTHO05D007955 6.7e-39 164.5 146 59.6
Sc22g0005540 Simmondsia chinensis HOM05D006148 ORTHO05D007955 8.7e-39 164.1 153 62.1
A01p20300 Brassica napus HOM05D006148 ORTHO05D007955 1.5e-38 163.3 157 59.2
C01p25460 Brassica napus HOM05D006148 ORTHO05D007955 1.5e-38 163.3 158 59.5
SalBow1G4160 Salvia bowleyana HOM05D006148 ORTHO05D007955 1.5e-38 163.3 123 70.7
THA.LOC104807925 Tarenaya hassleriana HOM05D006148 ORTHO05D007955 1.5e-38 163.3 128 69.5
Lj2A228G47 Lonicera japonica HOM05D006148 ORTHO05D007955 1.9e-38 162.9 111 75.7
BcaC09g50434 Brassica carinata HOM05D006148 ORTHO05D007955 2.5e-38 162.5 157 59.2
BcaNung00135 Brassica carinata HOM05D006148 ORTHO05D007955 2.5e-38 162.5 161 59.0
BraA01t01958Z Brassica rapa HOM05D006148 ORTHO05D007955 2.5e-38 162.5 157 59.2
FAN04G0567 Fragaria x ananassa HOM05D006148 ORTHO05D007955 2.5e-38 162.5 163 56.4
BolC1t02497H Brassica oleracea HOM05D006148 ORTHO05D007955 4.3e-38 161.8 157 59.2
DCAR_008334 Daucus carota HOM05D006148 ORTHO05D007955 4.3e-38 161.8 138 63.0
ECA248G1075 Erigeron canadensis HOM05D006148 ORTHO05D007955 4.3e-38 161.8 152 57.2
Aa31LG2G13090 Aethionema arabicum HOM05D006148 ORTHO05D007955 7.4e-38 161.0 158 58.2
Lj3A721T48 Lonicera japonica HOM05D006148 ORTHO05D007955 7.4e-38 161.0 136 65.4
Carub.0007s2441 Capsella rubella HOM05D006148 ORTHO05D007955 1.3e-37 160.2 161 56.5
PSO541G2943 Papaver somniferum HOM05D006148 ORTHO05D007955 1.3e-37 160.2 124 68.5
HPP92_005702 Vanilla planifolia HOM05D006148 ORTHO05D007955 1.6e-37 159.8 154 60.4
arahy.Tifrunner.gnm1.ann1.0GR2GF Arachis hypogaea HOM05D006148 ORTHO05D007955 2.8e-37 159.1 137 60.6
arahy.Tifrunner.gnm1.ann1.L2DS42 Arachis hypogaea HOM05D006148 ORTHO05D007955 2.8e-37 159.1 137 60.6
HanXRQChr17g0550021 Helianthus annuus HOM05D006148 ORTHO05D007955 8.2e-37 157.5 129 62.8
FAN08G3523 Fragaria x ananassa HOM05D006148 ORTHO05D007955 1.1e-36 157.1 172 52.9
THA.LOC104812735 Tarenaya hassleriana HOM05D006148 ORTHO05D007955 1.8e-36 156.4 152 57.9
ATR0767G234 Amborella trichopoda HOM05D006148 ORTHO05D007955 2.4e-36 156.0 139 64.0
Sp7g17180 Schrenkiella parvula HOM05D006148 ORTHO05D007955 2.4e-36 156.0 161 55.9
EL10Ac5g12797 Beta vulgaris HOM05D006148 ORTHO05D007955 1.0e-34 150.6 134 61.2
CARHR223570 Cardamine hirsuta HOM05D006148 ORTHO05D007955 2.2e-34 149.4 159 56.0
Hund11457 Selenicereus undatus HOM05D006148 ORTHO05D007955 2.9e-34 149.1 135 61.5
PSO675G9254 Papaver somniferum HOM05D006148 ORTHO05D007955 5.0e-34 148.3 124 66.1
Nn1g00796 Nelumbo nucifera HOM05D006148 ORTHO05D007955 6.5e-34 147.9 110 74.5
Os04g0431800 Oryza sativa ssp. japonica HOM05D006148 ORTHO05D007955 6.5e-34 147.9 142 59.9
AUR62017180 Chenopodium quinoa HOM05D006148 ORTHO05D007955 1.1e-33 147.1 125 64.0
AT4G17010 Arabidopsis thaliana HOM05D006148 ORTHO05D007955 2.5e-33 146.0 161 54.7
Hma1.2p1_1008F.1_g247180 Hydrangea macrophylla HOM05D006148 ORTHO05D007955 4.2e-33 145.2 113 73.5
Thhalv10026445m.g Eutrema salsugineum HOM05D006148 ORTHO05D007955 2.1e-32 142.9 161 54.0
Os02g0494600 Oryza sativa ssp. japonica HOM05D006148 ORTHO05D007955 4.6e-32 141.7 145 59.3
QL12p009037 Quercus lobata HOM05D006148 ORTHO05D007955 7.9e-32 141.0 313 36.7
AL7G37710 Arabidopsis lyrata HOM05D006148 ORTHO05D007955 3.0e-31 139.0 161 52.8
MBI06_g25325_MAGBIO Magnolia biondii HOM05D006148 ORTHO05D007955 5.7e-30 134.8 113 68.1
Zm00001eb422600 Zea mays HOM05D006148 ORTHO05D007955 8.2e-29 131.0 107 65.4
vmacro00048 Vaccinium macrocarpon HOM05D006148 ORTHO05D007955 1.9e-25 119.8 155 51.6
Lj2A721G5 Lonicera japonica HOM05D006148 ORTHO05D007955 8.2e-21 104.4 72 76.4
Ah.07g196390 Amaranthus hybridus HOM05D006148 ORTHO05D007955 2.0e-19 99.8 108 57.4
Cpa.g.sc1152.2 Carica papaya HOM05D006148 ORTHO05D007955 8.5e-18 94.4 76 65.8
SEGI_12345 Sequoiadendron giganteum HOM05D006148 ORTHO05D007955 3.2e-17 92.4 147 41.5
Oeu017208.1 Olea europaea HOM05D002196 ORTHO05D002565 3.0e-15 85.9 80 62.5
AUR62010708 Chenopodium quinoa HOM05D006148 ORTHO05D007955 8.8e-15 84.3 125 44.0
AUR62027260 Chenopodium quinoa HOM05D006148 ORTHO05D007955 8.8e-15 84.3 125 44.0
Nitab4.5_0000500g0150 Nicotiana tabacum HOM05D006148 ORTHO05D007955 9.1e-12 74.3 110 45.5
MBI15_g37973_MAGBIO Magnolia biondii HOM05D006148 ORTHO05D007955 6.5e-10 68.2 72 58.3
Hma1.2p1_0871F.1_g231040 Hydrangea macrophylla HOM05D006148 ORTHO05D007955 4.2e-09 65.5 63 63.5


User provided reference genes

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