Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.02G039100 Manihot esculenta HOM05D007031 ORTHO05D008815 4.2e-74 281.2 135 100.0
Duzib205G0920 Durio zibethinus HOM05D007031 ORTHO05D008815 1.2e-49 199.9 112 83.9
Potri.003G076400 Populus trichocarpa HOM05D007031 ORTHO05D008815 1.2e-49 199.9 114 82.5
TWI60G0154 Tripterygium wilfordii HOM05D007031 ORTHO05D008815 4.0e-48 194.9 114 78.1
Aqoxy5G01014 Aquilegia oxysepala HOM05D007031 ORTHO05D008815 5.2e-48 194.5 114 79.8
Dinv21635 Davidia involucrata HOM05D007031 ORTHO05D008815 8.9e-48 193.7 114 78.9
Eucgr.E00427 Eucalyptus grandis HOM05D007031 ORTHO05D008815 2.0e-47 192.6 114 78.1
Solyc08g007380.4 Solanum lycopersicum HOM05D007031 ORTHO05D008815 3.4e-47 191.8 127 71.7
TAR636G3191 Trochodendron aralioides HOM05D007031 ORTHO05D008815 1.7e-46 189.5 114 78.9
Sopen08g003330 Solanum pennellii HOM05D007031 ORTHO05D008815 2.9e-46 188.7 113 77.0
Gohir.D08G188900 Gossypium hirsutum HOM05D007031 ORTHO05D008815 3.7e-46 188.3 114 76.3
Gorai.004G199000 Gossypium raimondii HOM05D007031 ORTHO05D008815 3.7e-46 188.3 114 76.3
Migut.E00966 Erythranthe guttata HOM05D007031 ORTHO05D008815 6.4e-46 187.6 111 77.5
Migut.E01683 Erythranthe guttata HOM05D007031 ORTHO05D008815 6.4e-46 187.6 111 77.5
Cc08_g12500 Coffea canephora HOM05D007031 ORTHO05D008815 8.3e-46 187.2 124 71.8
THA.LOC104815489 Tarenaya hassleriana HOM05D007031 ORTHO05D008815 1.4e-45 186.4 114 79.8
Cfa012711 Carpinus fangiana HOM05D007031 ORTHO05D008815 1.9e-45 186.0 113 76.1
arahy.Tifrunner.gnm1.ann1.R85P7C Arachis hypogaea HOM05D007031 ORTHO05D008815 3.2e-45 185.3 114 75.4
arahy.Tifrunner.gnm1.ann1.WL6NYT Arachis hypogaea HOM05D007031 ORTHO05D008815 3.2e-45 185.3 114 75.4
FAN08G1843 Fragaria x ananassa HOM05D007031 ORTHO05D008815 7.1e-45 184.1 113 74.3
FvH4_5g18810 Fragaria vesca HOM05D007031 ORTHO05D008815 9.2e-45 183.7 113 75.2
FAN18G3883 Fragaria x ananassa HOM05D007031 ORTHO05D008815 9.2e-45 183.7 113 75.2
Lsat_1_v5_gn_5_187960 Lactuca sativa HOM05D007031 ORTHO05D008815 9.2e-45 183.7 114 75.4
Lj2A217G30 Lonicera japonica HOM05D007031 ORTHO05D008815 1.2e-44 183.3 109 78.9
Psat2g177560 Pisum sativum HOM05D007031 ORTHO05D008815 1.6e-44 183.0 112 75.9
Ciclev10022693m.g Citrus clementina HOM05D007031 ORTHO05D008815 2.1e-44 182.6 116 75.9
DCAR_027778 Daucus carota HOM05D007031 ORTHO05D008815 2.7e-44 182.2 118 72.0
Lj2g0002187 Lotus japonicus HOM05D007031 ORTHO05D008815 2.7e-44 182.2 118 72.9
MD04G1063700 Malus domestica HOM05D007031 ORTHO05D008815 3.5e-44 181.8 122 68.0
CAN.G1227.14 Capsicum annuum HOM05D007031 ORTHO05D008815 4.6e-44 181.4 118 72.0
Lalb_Chr09g0324411 Lupinus albus HOM05D007031 ORTHO05D008815 6.0e-44 181.0 116 74.1
Actinidia14432 Actinidia chinensis HOM05D007031 ORTHO05D008815 7.8e-44 180.6 118 76.3
FAN13G0327 Fragaria x ananassa HOM05D007031 ORTHO05D008815 7.8e-44 180.6 113 74.3
Phvul.002G062701 Phaseolus vulgaris HOM05D007031 ORTHO05D008815 7.8e-44 180.6 115 75.7
ECA232G3888 Erigeron canadensis HOM05D007031 ORTHO05D008815 1.0e-43 180.3 115 73.0
Glyma.11G032300 Glycine max HOM05D007031 ORTHO05D008815 1.0e-43 180.3 115 73.9
TPR.G25905 Trifolium pratense HOM05D007031 ORTHO05D008815 1.3e-43 179.9 113 73.5
PSO386G0128 Papaver somniferum HOM05D007031 ORTHO05D008815 2.3e-43 179.1 115 71.3
CSS0040909 Camellia sinensis var. sinensis HOM05D007031 ORTHO05D008815 3.0e-43 178.7 117 75.2
Aa31LG2G12690 Aethionema arabicum HOM05D007031 ORTHO05D008815 3.9e-43 178.3 114 73.7
RcHm_v2.0_Chr7g0203161 Rosa chinensis HOM05D007031 ORTHO05D008815 3.9e-43 178.3 113 73.5
VMungo1215G1202 Vigna mungo HOM05D007031 ORTHO05D008815 3.9e-43 178.3 115 73.0
CiPaw.12G109600 Carya illinoinensis HOM05D007031 ORTHO05D008815 5.1e-43 177.9 115 72.2
CARHR223050 Cardamine hirsuta HOM05D007031 ORTHO05D008815 3.3e-42 175.3 114 71.9
Carub.0007s2484 Capsella rubella HOM05D007031 ORTHO05D008815 1.2e-41 173.3 112 73.2
PSO724G0679 Papaver somniferum HOM05D007031 ORTHO05D008815 1.2e-41 173.3 109 69.7
CDE09G0628 Ceratophyllum demersum HOM05D005321 ORTHO05D006360 1.6e-41 172.9 118 66.9
BcaC09g50373 Brassica carinata HOM05D007031 ORTHO05D008815 2.1e-41 172.6 115 73.0
BraA01t02001Z Brassica rapa HOM05D007031 ORTHO05D008815 2.1e-41 172.6 116 74.1
AT4G16566 Arabidopsis thaliana HOM05D007031 ORTHO05D008815 2.8e-41 172.2 114 70.2
BcaNung00171 Brassica carinata HOM05D007031 ORTHO05D008815 2.8e-41 172.2 115 73.0
A01p20650 Brassica napus HOM05D007031 ORTHO05D008815 8.1e-41 170.6 116 73.3
Gohir.A08G170700 Gossypium hirsutum HOM05D007031 ORTHO05D008815 8.1e-41 170.6 118 71.2
MSTRG.13772 Avicennia marina HOM05D007031 ORTHO05D008815 1.4e-40 169.9 115 68.7
AUR62042788 Chenopodium quinoa HOM05D007031 ORTHO05D008815 1.4e-40 169.9 111 71.2
C01p26150 Brassica napus HOM05D007031 ORTHO05D008815 1.8e-40 169.5 116 72.4
BolC1t02559H Brassica oleracea HOM05D007031 ORTHO05D008815 1.8e-40 169.5 116 72.4
AL7G38260 Arabidopsis lyrata HOM05D007031 ORTHO05D008815 2.3e-40 169.1 114 68.4
Thhalv10026497m.g Eutrema salsugineum HOM05D007031 ORTHO05D008815 2.3e-40 169.1 114 70.2
CANSAT21G0077 Cannabis sativa HOM05D007031 ORTHO05D008815 8.9e-40 167.2 108 70.4
Sed0003740 Sechium edule HOM05D007031 ORTHO05D008815 8.9e-40 167.2 114 68.4
CsaV3_5G004200 Cucumis sativus L. HOM05D007031 ORTHO05D008815 1.5e-39 166.4 114 69.3
HPP92_027426 Vanilla planifolia HOM05D007031 ORTHO05D008815 2.6e-39 165.6 114 67.5
HPP92_021039 Vanilla planifolia HOM05D007031 ORTHO05D008815 5.8e-39 164.5 114 66.7
Os04g0535400 Oryza sativa ssp. japonica HOM05D007031 ORTHO05D008815 1.7e-38 162.9 114 67.5
ATR0317G125 Amborella trichopoda HOM05D007031 ORTHO05D008815 6.4e-38 161.0 110 66.4
MBI04_g09491_MAGBIO Magnolia biondii HOM05D007031 ORTHO05D008815 4.1e-37 158.3 156 52.6
Atru.chr9.1322 Acer truncatum HOM05D007031 ORTHO05D008815 1.3e-35 153.3 88 78.4
Peaxi162Scf00102g01143 Petunia axillaris HOM05D007031 ORTHO05D008815 1.7e-35 152.9 93 75.3
ClCG01G004020 Citrullus lanatus HOM05D007031 ORTHO05D008815 5.1e-35 151.4 142 54.9
CSS0002961 Camellia sinensis var. sinensis HOM05D007031 ORTHO05D008815 6.6e-35 151.0 115 67.0
SEGI_08804 Sequoiadendron giganteum HOM05D007031 ORTHO05D008815 6.6e-35 151.0 110 63.6
Hma1.2p1_0316F.1_g123210 Hydrangea macrophylla HOM05D007031 ORTHO05D008815 1.5e-34 149.8 89 75.3
BcaNung02861 Brassica carinata HOM05D007031 ORTHO05D008815 4.3e-34 148.3 118 67.8
AUR62007512 Chenopodium quinoa HOM05D007031 ORTHO05D008815 1.2e-33 146.7 89 74.2
EL10Ac5g13074 Beta vulgaris HOM05D007031 ORTHO05D008815 6.2e-33 144.4 147 50.3
GSVIVG01001319001 Vitis vinifera HOM05D007031 ORTHO05D008815 6.2e-33 144.4 89 78.7
BolC7t45328H Brassica oleracea HOM05D007031 ORTHO05D008815 1.4e-32 143.3 120 66.7
Sabra03G0047000 Salix brachista HOM05D007031 ORTHO05D008815 3.1e-32 142.1 131 58.8
AL7G38210 Arabidopsis lyrata HOM05D007031 ORTHO05D008815 6.9e-32 141.0 91 71.4
QL12p012249 Quercus lobata HOM05D007031 ORTHO05D008815 6.9e-32 141.0 225 37.8
C07p48030 Brassica napus HOM05D007337 ORTHO05D004972 8.9e-32 140.6 115 63.5
Prupe.5G068700 Prunus persica HOM05D007031 ORTHO05D008815 2.0e-31 139.4 89 73.0
unitig_699.g19776 Utricularia gibba HOM05D007031 ORTHO05D008815 2.6e-31 139.0 89 70.8
FAN02G0786 Fragaria x ananassa HOM05D007031 ORTHO05D008815 9.9e-31 137.1 108 67.6
Hund14533 Selenicereus undatus HOM05D007031 ORTHO05D008815 4.9e-30 134.8 74 81.1
A03p50000 Brassica napus HOM05D007337 ORTHO05D004972 8.4e-30 134.0 115 63.5
BcaC06g33496 Brassica carinata HOM05D007031 ORTHO05D008815 1.1e-29 133.7 93 72.0
SalBow6G3941 Salvia bowleyana HOM05D007031 ORTHO05D008815 1.6e-28 129.8 99 62.6
Sc22g0000840 Simmondsia chinensis HOM05D007031 ORTHO05D008815 1.6e-28 129.8 83 71.1
FAN14G5160 Fragaria x ananassa HOM05D007031 ORTHO05D008815 3.9e-27 125.2 112 56.2
Pp3c5_26880 Physcomitrium patens HOM05D007031 ORTHO05D008815 1.5e-26 123.2 113 52.2
SMO274G0074 Selaginella moellendorffii HOM05D007031 ORTHO05D008815 7.3e-26 120.9 114 48.2
CiPaw.11G153700 Carya illinoinensis HOM05D007031 ORTHO05D008815 2.1e-25 119.4 75 72.0
Sp7g15180 Schrenkiella parvula HOM05D007031 ORTHO05D008815 8.1e-25 117.5 115 55.7
vmacro16391 Vaccinium macrocarpon HOM05D007031 ORTHO05D008815 1.4e-24 116.7 74 73.0
Nitab4.5_0000712g0190 Nicotiana tabacum HOM05D007031 ORTHO05D008815 1.8e-24 116.3 92 60.9
Zm00001eb427450 Zea mays HOM05D007031 ORTHO05D008815 3.1e-24 115.5 78 64.1
Pp3c6_3420 Physcomitrium patens HOM05D029721 ORTHO05D008815 6.9e-24 114.4 141 42.6
SEGI_18261 Sequoiadendron giganteum HOM05D007031 ORTHO05D008815 7.6e-23 110.9 100 55.0
SMO134G0120 Selaginella moellendorffii HOM05D000076 ORTHO05D001279 9.9e-23 110.5 88 53.4
MELO3C005535.2 Cucumis melo HOM05D007031 ORTHO05D008815 2.2e-22 109.4 74 70.3
Thecc.03G252200 Theobroma cacao HOM05D007031 ORTHO05D008815 4.9e-22 108.2 81 69.1
Medtr5g012525 Medicago truncatula HOM05D007031 ORTHO05D008815 3.2e-21 105.5 78 64.1
CSS0026472 Camellia sinensis var. sinensis HOM05D007031 ORTHO05D008815 4.6e-20 101.7 112 51.8
Oeu062969.1 Olea europaea HOM05D007031 ORTHO05D008815 2.3e-19 99.4 114 48.2
MCO15G691 Micromonas commoda HOM05D007031 ORTHO05D008815 6.7e-19 97.8 114 43.9
Cre03.g169200 Chlamydomonas reinhardtii HOM05D007031 ORTHO05D008815 8.7e-19 97.4 110 43.6
Nn6g33971 Nelumbo nucifera HOM05D007031 ORTHO05D008815 3.6e-17 92.0 48 85.4
FAN05G5584 Fragaria x ananassa HOM05D007031 ORTHO05D008815 6.9e-16 87.8 59 74.6
FAN04G1478 Fragaria x ananassa HOM05D007031 ORTHO05D008815 1.5e-15 86.7 51 70.6
THA.LOC104815507 Tarenaya hassleriana HOM05D007031 ORTHO05D008815 3.2e-13 79.0 45 82.2
Haze_07923 Corylus avellana HOM05D007031 ORTHO05D008815 7.1e-13 77.8 112 42.9
COL.COLO4_37184 Corchorus olitorius HOM05D007031 ORTHO05D008815 1.8e-11 73.2 45 82.2
Hund14535 Selenicereus undatus HOM05D007031 ORTHO05D008815 1.1e-08 63.9 43 65.1
Nitab4.5_0002225g0110 Nicotiana tabacum HOM05D007031 ORTHO05D008815 1.4e-08 63.5 66 53.0
Haze_07922 Corylus avellana HOM05D007031 ORTHO05D008815 1.8e-08 63.2 45 64.4
HanXRQChr17g0549671 Helianthus annuus HOM05D007031 ORTHO05D008815 1.8e-08 63.2 40 72.5
AagrBONN_evm.TU.Sc2ySwM_344.2061 Anthoceros agrestis HOM05D002397 ORTHO05D002667 1.2e-07 60.5 109 33.0
CDE04G2843 Ceratophyllum demersum HOM05D002397 ORTHO05D002667 5.8e-07 58.2 105 31.4
PSO675G0625 Papaver somniferum HOM05D002397 ORTHO05D002667 1.7e-06 56.6 112 29.5
Haze_26654 Corylus avellana HOM05D002397 ORTHO05D002667 2.2e-06 56.2 91 35.2
PSO017G1677 Papaver somniferum HOM05D002397 ORTHO05D002667 8.4e-06 54.3 112 28.6


User provided reference genes

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