Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.02G035200 Manihot esculenta HOM05D006644 ORTHO05D008285 4.1e-170 601.3 302 100.0
TWI81G0884 Tripterygium wilfordii HOM05D006644 ORTHO05D008285 3.4e-148 528.5 302 85.1
CiPaw.12G106200 Carya illinoinensis HOM05D006644 ORTHO05D008285 7.6e-148 527.3 304 86.5
Sabra01G0092400 Salix brachista HOM05D006644 ORTHO05D008285 1.7e-147 526.2 302 85.4
Potri.001G119700 Populus trichocarpa HOM05D006644 ORTHO05D008285 2.2e-147 525.8 302 85.4
Haze_08586 Corylus avellana HOM05D006644 ORTHO05D008285 3.2e-146 521.9 299 86.3
QL07p036208 Quercus lobata HOM05D006644 ORTHO05D008285 4.2e-146 521.5 298 86.2
Cfa012781 Carpinus fangiana HOM05D006644 ORTHO05D008285 9.3e-146 520.4 299 86.0
Atru.chr12.1357 Acer truncatum HOM05D006644 ORTHO05D008285 6.7e-144 514.2 302 82.8
Prupe.5G076400 Prunus persica HOM05D006644 ORTHO05D008285 3.7e-142 508.4 299 83.3
CANSAT21G2263 Cannabis sativa HOM05D006644 ORTHO05D008285 6.2e-142 507.7 298 82.2
MD04G1082000 Malus domestica HOM05D006644 ORTHO05D008285 3.1e-141 505.4 299 82.3
Gohir.A03G014500 Gossypium hirsutum HOM05D006644 ORTHO05D008285 5.3e-141 504.6 302 82.1
Duzib068G0588 Durio zibethinus HOM05D006644 ORTHO05D008285 2.0e-140 502.7 302 82.1
Thecc.03G258000 Theobroma cacao HOM05D006644 ORTHO05D008285 7.6e-140 500.7 302 81.1
ClCG10G003030 Citrullus lanatus HOM05D006644 ORTHO05D008285 1.3e-139 500.0 299 82.3
Sed0006360 Sechium edule HOM05D006644 ORTHO05D008285 1.7e-139 499.6 304 81.2
Phvul.011G156400 Phaseolus vulgaris HOM05D006644 ORTHO05D008285 2.2e-139 499.2 299 81.3
arahy.Tifrunner.gnm1.ann1.FSA67V Arachis hypogaea HOM05D006644 ORTHO05D008285 2.9e-139 498.8 299 81.9
arahy.Tifrunner.gnm1.ann1.TVS5XD Arachis hypogaea HOM05D006644 ORTHO05D008285 2.9e-139 498.8 299 81.9
Lj2g0023084 Lotus japonicus HOM05D006644 ORTHO05D008285 3.8e-139 498.4 302 81.5
Cpa.g.sc29.104 Carica papaya HOM05D006644 ORTHO05D008285 4.9e-139 498.0 302 81.5
Gohir.D03G160300 Gossypium hirsutum HOM05D006644 ORTHO05D008285 6.5e-139 497.7 302 81.1
Ciclev10024149m.g Citrus clementina HOM05D006644 ORTHO05D008285 8.4e-139 497.3 302 78.8
FAN08G3361 Fragaria x ananassa HOM05D006644 ORTHO05D008285 8.4e-139 497.3 299 81.9
Gorai.003G168800 Gossypium raimondii HOM05D006644 ORTHO05D008285 1.1e-138 496.9 302 81.5
CsaV3_3G003070 Cucumis sativus L. HOM05D006644 ORTHO05D008285 1.4e-138 496.5 299 81.9
FvH4_5g00371 Fragaria vesca HOM05D006644 ORTHO05D008285 1.4e-138 496.5 299 81.9
RcHm_v2.0_Chr7g0202141 Rosa chinensis HOM05D006644 ORTHO05D008285 1.4e-138 496.5 299 81.9
MELO3C013973.2 Cucumis melo HOM05D006644 ORTHO05D008285 1.9e-138 496.1 299 81.9
MSTRG.22191 Avicennia marina HOM05D006644 ORTHO05D008285 4.2e-138 495.0 304 78.3
VMungo0720G3176 Vigna mungo HOM05D006644 ORTHO05D008285 5.5e-138 494.6 299 80.3
FAN04G2033 Fragaria x ananassa HOM05D006644 ORTHO05D008285 9.3e-138 493.8 299 81.3
Medtr5g012060 Medicago truncatula HOM05D006644 ORTHO05D008285 2.1e-137 492.7 299 80.9
Glyma.13G075600 Glycine max HOM05D006644 ORTHO05D008285 4.6e-137 491.5 299 80.6
CSS0029694 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 7.9e-137 490.7 299 80.3
TAR629G2969 Trochodendron aralioides HOM05D006644 ORTHO05D008285 1.3e-136 490.0 304 80.3
CSS0031485 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 1.8e-136 489.6 297 80.5
Ca_06699_v3 Cicer arietinum L. HOM05D006644 ORTHO05D008285 1.8e-136 489.6 299 80.3
DCAR_021556 Daucus carota HOM05D006644 ORTHO05D008285 3.0e-136 488.8 299 79.6
Eucgr.E00462 Eucalyptus grandis HOM05D006644 ORTHO05D008285 6.7e-136 487.6 300 79.0
Lalb_Chr05g0214591 Lupinus albus HOM05D006644 ORTHO05D008285 6.7e-136 487.6 304 79.9
TPR.G25884 Trifolium pratense HOM05D006644 ORTHO05D008285 8.7e-136 487.3 299 80.3
Cc08_g13030 Coffea canephora HOM05D006644 ORTHO05D008285 4.3e-135 485.0 304 78.0
Hma1.2p1_0123F.1_g057970 Hydrangea macrophylla HOM05D006644 ORTHO05D008285 4.3e-135 485.0 297 77.8
Oeu046413.1 Olea europaea HOM05D006644 ORTHO05D008285 4.3e-135 485.0 304 78.3
Oeu046415.1 Olea europaea HOM05D006644 ORTHO05D008285 4.3e-135 485.0 304 78.3
Psat2g178760 Pisum sativum HOM05D006644 ORTHO05D008285 1.3e-134 483.4 299 80.3
Lj3P740T25 Lonicera japonica HOM05D006644 ORTHO05D008285 4.8e-134 481.5 304 78.3
Hund11575 Selenicereus undatus HOM05D006644 ORTHO05D008285 8.2e-134 480.7 298 78.5
Nitab4.5_0004059g0010 Nicotiana tabacum HOM05D006644 ORTHO05D008285 1.8e-133 479.6 304 76.6
Solyc08g007440.2 Solanum lycopersicum HOM05D006644 ORTHO05D008285 1.5e-132 476.5 304 77.0
Sc01g0009310 Simmondsia chinensis HOM05D006644 ORTHO05D008285 2.0e-132 476.1 298 78.9
Sopen08g003400 Solanum pennellii HOM05D006644 ORTHO05D008285 4.5e-132 474.9 304 76.6
CAN.G1394.30 Capsicum annuum HOM05D006644 ORTHO05D008285 5.8e-132 474.6 304 76.0
Nitab4.5_0001707g0070 Nicotiana tabacum HOM05D006644 ORTHO05D008285 5.8e-132 474.6 304 76.3
PGSC0003DMG400012507 Solanum tuberosum HOM05D006644 ORTHO05D008285 5.8e-132 474.6 304 76.3
Aqoxy2G01551 Aquilegia oxysepala HOM05D006644 ORTHO05D008285 1.3e-131 473.4 304 77.3
COL.COLO4_37229 Corchorus olitorius HOM05D000927 ORTHO05D000850 1.7e-131 473.0 282 83.0
THA.LOC104818444 Tarenaya hassleriana HOM05D006644 ORTHO05D008285 2.9e-131 472.2 304 75.7
Nn4g25799 Nelumbo nucifera HOM05D006644 ORTHO05D008285 3.8e-131 471.9 304 78.3
unitig_0.g533 Utricularia gibba HOM05D006644 ORTHO05D008285 1.9e-130 469.5 299 76.6
BcaC04g22441 Brassica carinata HOM05D006644 ORTHO05D008285 1.2e-129 466.8 300 76.7
BolC9t54841H Brassica oleracea HOM05D006644 ORTHO05D008285 1.2e-129 466.8 300 76.7
Sp2g01910 Schrenkiella parvula HOM05D006644 ORTHO05D008285 1.6e-129 466.5 302 75.8
BcaB07g31354 Brassica carinata HOM05D006644 ORTHO05D008285 2.7e-129 465.7 300 76.3
C09p19300 Brassica napus HOM05D006644 ORTHO05D008285 6.1e-129 464.5 300 76.3
A09p16050 Brassica napus HOM05D006644 ORTHO05D008285 7.9e-129 464.2 300 76.0
Migut.E00967 Erythranthe guttata HOM05D006644 ORTHO05D008285 7.9e-129 464.2 298 76.8
BraA09t37241Z Brassica rapa HOM05D006644 ORTHO05D008285 1.0e-128 463.8 300 75.7
Thhalv10023606m.g Eutrema salsugineum HOM05D006644 ORTHO05D008285 1.8e-128 463.0 302 76.2
Aa31LG2G270 Aethionema arabicum HOM05D006644 ORTHO05D008285 2.3e-128 462.6 302 74.5
CARHR049110 Cardamine hirsuta HOM05D006644 ORTHO05D008285 1.5e-127 459.9 302 75.5
ECA232G2550 Erigeron canadensis HOM05D006644 ORTHO05D008285 5.7e-127 458.0 304 74.7
AL2G13060 Arabidopsis lyrata HOM05D006644 ORTHO05D008285 7.4e-127 457.6 304 75.3
Migut.E01682 Erythranthe guttata HOM05D006644 ORTHO05D008285 9.7e-127 457.2 298 76.2
AT1G62730 Arabidopsis thaliana HOM05D006644 ORTHO05D008285 1.1e-125 453.8 302 75.2
Carub.0002s0225 Capsella rubella HOM05D006644 ORTHO05D008285 1.4e-125 453.4 302 74.8
Lsat_1_v5_gn_4_110420 Lactuca sativa HOM05D006644 ORTHO05D008285 1.2e-124 450.3 300 74.0
HanXRQChr16g0502401 Helianthus annuus HOM05D006644 ORTHO05D008285 2.0e-124 449.5 304 73.4
MBI05_g39054_MAGBIO Magnolia biondii HOM05D006644 ORTHO05D008285 4.5e-124 448.4 299 74.6
Actinidia05183 Actinidia chinensis HOM05D006644 ORTHO05D008285 4.6e-121 438.3 278 78.8
HPP92_012043 Vanilla planifolia HOM05D006644 ORTHO05D008285 4.8e-118 428.3 295 71.2
Actinidia27444 Actinidia chinensis HOM05D006644 ORTHO05D008285 1.5e-116 423.3 257 81.3
CDE05G2087 Ceratophyllum demersum HOM05D006644 ORTHO05D008285 3.4e-116 422.2 302 69.2
SGA_v2.0_scaffold13G06437 Striga asiatica HOM05D006644 ORTHO05D008285 1.1e-114 417.2 294 72.1
Os06g0104100 Oryza sativa ssp. japonica HOM05D006644 ORTHO05D008285 1.6e-113 413.3 299 68.9
Dinv39097 Davidia involucrata HOM05D006644 ORTHO05D008285 3.6e-113 412.1 241 84.6
Zm00001eb268550 Zea mays HOM05D006644 ORTHO05D008285 7.4e-111 404.4 300 67.7
SalBow7G1671 Salvia bowleyana HOM05D006644 ORTHO05D008285 6.3e-110 401.4 281 70.1
GSVIVG01000849001 Vitis vinifera HOM05D006644 ORTHO05D008285 5.9e-108 394.8 266 74.1
ATR0789G127 Amborella trichopoda HOM05D006644 ORTHO05D008285 7.7e-108 394.4 299 65.2
AUR62010133 Chenopodium quinoa HOM05D006644 ORTHO05D008285 1.7e-99 366.7 241 73.9
SEGI_03161 Sequoiadendron giganteum HOM05D006644 ORTHO05D008285 8.8e-96 354.4 304 59.5
Ah.12g056410 Amaranthus hybridus HOM05D000927 ORTHO05D000850 9.1e-93 344.4 230 73.9
Zm00001eb268530 Zea mays HOM05D006644 ORTHO05D008285 3.8e-91 339.0 264 65.9
Lalb_Chr16g0379761 Lupinus albus HOM05D006644 ORTHO05D008285 9.4e-90 334.3 220 75.0
Zm00001eb201480 Zea mays HOM05D006644 ORTHO05D008285 8.0e-89 331.3 255 67.1
Mapoly0004s0255 Marchantia polymorpha HOM05D006644 ORTHO05D008285 4.0e-88 328.9 298 58.1
Peaxi162Scf00102g01130 Petunia axillaris HOM05D006644 ORTHO05D008285 3.4e-87 325.9 295 60.7
SEGI_02663 Sequoiadendron giganteum HOM05D006644 ORTHO05D008285 4.4e-87 325.5 291 58.4
Pp3c14_3830 Physcomitrium patens HOM05D006644 ORTHO05D008285 7.0e-85 318.2 299 54.5
CSS0049876 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 1.2e-84 317.4 191 80.6
Thhalv10029515m.g Eutrema salsugineum HOM05D006644 ORTHO05D008285 2.6e-79 299.7 302 56.0
Zm00001eb270010 Zea mays HOM05D006644 ORTHO05D008285 1.9e-74 283.5 195 70.8
SMO358G0371 Selaginella moellendorffii HOM05D006644 ORTHO05D008285 3.3e-74 282.7 300 50.7
CBR_g24133 Chara braunii HOM05D006644 ORTHO05D008285 7.3e-66 255.0 314 43.6
ATR0789G122 Amborella trichopoda HOM05D006644 ORTHO05D008285 1.7e-62 243.8 214 59.8
CSS0030048 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 3.1e-56 223.0 144 79.2
CSS0012505 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 8.9e-56 221.5 143 77.6
CSS0030367 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 6.4e-54 215.3 144 75.7
QL12p014121 Quercus lobata HOM05D006644 ORTHO05D008285 8.4e-54 214.9 303 46.5
MCO14G155 Micromonas commoda HOM05D006644 ORTHO05D008285 5.1e-51 205.7 317 41.3
CSS0018627 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 1.4e-48 197.6 144 72.9
AagrBONN_evm.TU.Sc2ySwM_362.950 Anthoceros agrestis HOM05D006644 ORTHO05D008285 1.6e-44 184.1 162 53.7
Thhalv10022385m.g Eutrema salsugineum HOM05D006644 ORTHO05D008285 5.6e-42 175.6 123 69.9
Cre03.g194300 Chlamydomonas reinhardtii HOM05D006644 ORTHO05D008285 3.8e-38 162.9 359 31.8
PRCOL_00006235 Prasinoderma coloniale HOM05D006644 ORTHO05D008285 8.4e-38 161.8 305 35.7
CSS0020508 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 2.1e-36 157.1 86 81.4
BcaC06g31907 Brassica carinata HOM05D006644 ORTHO05D008285 2.7e-36 156.8 263 41.4
Cfa023787 Carpinus fangiana HOM05D006644 ORTHO05D008285 2.5e-26 123.6 334 29.6
MBI05_g43359_MAGBIO Magnolia biondii HOM05D006644 ORTHO05D008285 1.8e-24 117.5 80 72.5
MBI05_g43358_MAGBIO Magnolia biondii HOM05D006644 ORTHO05D008285 5.5e-13 79.3 43 83.7


User provided reference genes

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