Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.02G034200 Manihot esculenta HOM05D005835 ORTHO05D007187 1.1e-96 356.7 180 100.0
Manes.01G074300 Manihot esculenta HOM05D005835 ORTHO05D007187 3.9e-75 285.0 178 80.3
Sabra03G0079300 Salix brachista HOM05D005835 ORTHO05D007187 2.5e-61 239.2 179 65.9
Potri.003G114200 Populus trichocarpa HOM05D005835 ORTHO05D007187 4.6e-60 235.0 179 64.8
Potri.001G118700 Populus trichocarpa HOM05D005835 ORTHO05D007187 1.1e-58 230.3 179 63.7
Prupe.4G260700 Prunus persica HOM05D005835 ORTHO05D007187 9.1e-56 220.7 179 60.3
Haze_08597 Corylus avellana HOM05D005835 ORTHO05D007187 1.5e-55 219.9 180 61.1
Sabra01G0091600 Salix brachista HOM05D005835 ORTHO05D007187 3.2e-53 212.2 179 60.3
TWI81G0081 Tripterygium wilfordii HOM05D005835 ORTHO05D007187 9.4e-53 210.7 179 57.0
Eucgr.E01477 Eucalyptus grandis HOM05D005835 ORTHO05D007187 2.7e-52 209.1 178 60.7
Atru.chr9.1404 Acer truncatum HOM05D005835 ORTHO05D007187 1.0e-51 207.2 176 62.5
Ciclev10022502m.g Citrus clementina HOM05D005835 ORTHO05D007187 1.5e-50 203.4 179 58.1
ClCG10G003070 Citrullus lanatus HOM05D005835 ORTHO05D007187 3.3e-50 202.2 177 59.3
Cfa012808 Carpinus fangiana HOM05D005835 ORTHO05D007187 4.4e-50 201.8 181 58.0
MELO3C013977.2 Cucumis melo HOM05D005835 ORTHO05D007187 5.7e-50 201.4 180 57.2
CiPaw.12G105500 Carya illinoinensis HOM05D005835 ORTHO05D007187 9.7e-50 200.7 179 59.2
CsaV3_3G003110 Cucumis sativus L. HOM05D005835 ORTHO05D007187 2.8e-49 199.1 180 56.1
Cpa.g.sc29.103 Carica papaya HOM05D005835 ORTHO05D007187 4.8e-49 198.4 179 56.4
Duzib068G0435 Durio zibethinus HOM05D005835 ORTHO05D007187 4.8e-49 198.4 179 54.7
Sed0018910 Sechium edule HOM05D005835 ORTHO05D007187 1.1e-48 197.2 177 57.6
Duzib205G1381 Durio zibethinus HOM05D005835 ORTHO05D007187 2.4e-48 196.1 180 53.3
MD04G1080500 Malus domestica HOM05D005835 ORTHO05D007187 3.5e-47 192.2 179 56.4
Hma1.2p1_2131F.1_g314730 Hydrangea macrophylla HOM05D005835 ORTHO05D007187 5.0e-46 188.3 179 53.6
CANSAT21G1576 Cannabis sativa HOM05D005835 ORTHO05D007187 8.5e-46 187.6 181 56.9
CiPaw.11G149200 Carya illinoinensis HOM05D005835 ORTHO05D007187 1.5e-45 186.8 180 56.7
Nn1g01126 Nelumbo nucifera HOM05D005835 ORTHO05D007187 2.5e-45 186.0 179 55.9
Dinv21579 Davidia involucrata HOM05D005835 ORTHO05D007187 5.5e-45 184.9 175 54.9
Dinv39089 Davidia involucrata HOM05D005835 ORTHO05D007187 7.2e-45 184.5 174 54.6
Nn1g01130 Nelumbo nucifera HOM05D005835 ORTHO05D007187 9.4e-45 184.1 179 55.3
QL93p2009_0035 Quercus lobata HOM05D005835 ORTHO05D007187 3.6e-44 182.2 177 54.8
TAR374G0447 Trochodendron aralioides HOM05D005835 ORTHO05D007187 3.6e-44 182.2 178 53.9
Nitab4.5_0005535g0030 Nicotiana tabacum HOM05D005835 ORTHO05D007187 8.0e-44 181.0 180 52.2
QL03p017823 Quercus lobata HOM05D005835 ORTHO05D007187 8.0e-44 181.0 177 54.2
FAN13G2021 Fragaria x ananassa HOM05D005835 ORTHO05D007187 1.8e-43 179.9 177 53.7
MBI04_g35668_MAGBIO Magnolia biondii HOM05D005835 ORTHO05D007187 3.0e-43 179.1 179 54.7
FvH4_5g00490 Fragaria vesca HOM05D005835 ORTHO05D007187 5.2e-43 178.3 177 53.7
FAN18G1180 Fragaria x ananassa HOM05D005835 ORTHO05D007187 5.2e-43 178.3 177 53.7
FAN08G1980 Fragaria x ananassa HOM05D005835 ORTHO05D007187 8.8e-43 177.6 177 52.5
FAN04G1493 Fragaria x ananassa HOM05D005835 ORTHO05D007187 1.2e-42 177.2 177 53.1
TAR375G0176 Trochodendron aralioides HOM05D005835 ORTHO05D007187 2.0e-42 176.4 170 54.7
Nitab4.5_0005230g0060 Nicotiana tabacum HOM05D005835 ORTHO05D007187 9.7e-42 174.1 180 49.4
Rhsim07G0102800 Rhododendron simsii HOM05D005835 ORTHO05D007187 9.7e-42 174.1 169 53.3
RcHm_v2.0_Chr7g0202021 Rosa chinensis HOM05D005835 ORTHO05D007187 2.2e-41 172.9 177 52.0
Duzib084G0572 Durio zibethinus HOM05D005835 ORTHO05D007187 4.8e-41 171.8 180 50.0
COL.COLO4_23892 Corchorus olitorius HOM05D005835 ORTHO05D007187 6.3e-41 171.4 179 49.2
Gohir.D03G159700 Gossypium hirsutum HOM05D005835 ORTHO05D007187 8.2e-41 171.0 175 49.1
AUR62029858 Chenopodium quinoa HOM05D005835 ORTHO05D007187 1.1e-40 170.6 172 54.1
PGSC0003DMG400029987 Solanum tuberosum HOM05D005835 ORTHO05D007187 1.4e-40 170.2 180 50.6
Thecc.03G259800 Theobroma cacao HOM05D005835 ORTHO05D007187 1.4e-40 170.2 179 48.0
CAN.G1528.1 Capsicum annuum HOM05D005835 ORTHO05D007187 1.8e-40 169.9 176 48.9
Sc02g0009280 Simmondsia chinensis HOM05D005835 ORTHO05D007187 1.8e-40 169.9 177 50.3
AUR62025857 Chenopodium quinoa HOM05D005835 ORTHO05D007187 2.4e-40 169.5 172 52.9
Gohir.D12G222800 Gossypium hirsutum HOM05D005835 ORTHO05D007187 7.0e-40 167.9 180 48.9
Gorai.008G238900 Gossypium raimondii HOM05D005835 ORTHO05D007187 7.0e-40 167.9 180 48.9
Gorai.003G168000 Gossypium raimondii HOM05D005835 ORTHO05D007187 9.1e-40 167.5 175 48.6
Sopen11g025020 Solanum pennellii HOM05D005835 ORTHO05D007187 2.0e-39 166.4 181 50.8
EL10Ac4g07900 Beta vulgaris HOM05D005835 ORTHO05D007187 2.7e-39 166.0 171 53.8
DCAR_000844 Daucus carota HOM05D004805 ORTHO05D007187 2.7e-39 166.0 176 49.4
Peaxi162Scf00004g03718 Petunia axillaris HOM05D005835 ORTHO05D007187 3.5e-39 165.6 172 50.0
PGR031G1343 Punica granatum HOM05D005835 ORTHO05D007187 3.5e-39 165.6 179 52.0
QL12p014300 Quercus lobata HOM05D005835 ORTHO05D007187 3.5e-39 165.6 172 50.6
Aqoxy7G00679 Aquilegia oxysepala HOM05D005835 ORTHO05D007187 1.3e-38 163.7 175 52.0
Gohir.A12G220500 Gossypium hirsutum HOM05D005835 ORTHO05D007187 1.3e-38 163.7 180 47.8
Oeu040228.1 Olea europaea HOM05D005835 ORTHO05D007187 1.7e-38 163.3 180 49.4
Solyc11g065270.2 Solanum lycopersicum HOM05D005835 ORTHO05D007187 1.7e-38 163.3 179 49.7
Gohir.A03G013800 Gossypium hirsutum HOM05D005835 ORTHO05D007187 6.5e-38 161.4 175 46.3
Cc08_g13120 Coffea canephora HOM05D005835 ORTHO05D007187 1.9e-37 159.8 177 50.3
Sp6g05250 Schrenkiella parvula HOM05D005835 ORTHO05D007187 2.5e-37 159.5 176 48.9
C02p40850 Brassica napus HOM05D005835 ORTHO05D007187 3.2e-37 159.1 176 48.9
BcaC03g16290 Brassica carinata HOM05D005835 ORTHO05D007187 5.5e-37 158.3 176 48.9
BolC2t10102H Brassica oleracea HOM05D005835 ORTHO05D007187 5.5e-37 158.3 176 48.9
ECA233G2089 Erigeron canadensis HOM05D005835 ORTHO05D007187 9.4e-37 157.5 173 50.9
arahy.Tifrunner.gnm1.ann1.7G3HX4 Arachis hypogaea HOM05D005835 ORTHO05D007187 1.2e-36 157.1 170 50.0
CARHR253910 Cardamine hirsuta HOM05D005835 ORTHO05D007187 1.2e-36 157.1 176 49.4
Ah.01g013950 Amaranthus hybridus HOM05D005835 ORTHO05D007187 2.1e-36 156.4 168 51.2
Migut.A00824 Erythranthe guttata HOM05D005835 ORTHO05D007187 2.1e-36 156.4 183 48.6
SalBow6G1585 Salvia bowleyana HOM05D005835 ORTHO05D007187 2.1e-36 156.4 173 49.1
Aa31LG9G10270 Aethionema arabicum HOM05D005835 ORTHO05D007187 3.6e-36 155.6 180 51.1
MSTRG.12070 Avicennia marina HOM05D005835 ORTHO05D007187 4.7e-36 155.2 177 49.7
BraA02t07561Z Brassica rapa HOM05D005835 ORTHO05D007187 6.1e-36 154.8 175 48.0
Carub.0006s3148 Capsella rubella HOM05D005835 ORTHO05D007187 6.1e-36 154.8 175 48.6
Migut.A00868 Erythranthe guttata HOM05D005835 ORTHO05D007187 8.0e-36 154.5 183 48.1
A02p25690 Brassica napus HOM05D005835 ORTHO05D007187 1.0e-35 154.1 176 47.2
AL6G47200 Arabidopsis lyrata HOM05D005835 ORTHO05D007187 3.0e-35 152.5 176 48.9
AT4G12340 Arabidopsis thaliana HOM05D005835 ORTHO05D007187 6.8e-35 151.4 176 47.7
arahy.Tifrunner.gnm1.ann1.4SJ6CH Arachis hypogaea HOM05D005835 ORTHO05D007187 8.8e-35 151.0 165 49.7
PSO782G1790 Papaver somniferum HOM05D005835 ORTHO05D007187 1.5e-34 150.2 192 48.4
CDE02G0720 Ceratophyllum demersum HOM05D005835 ORTHO05D007187 2.0e-34 149.8 180 47.2
BcaB05g23754 Brassica carinata HOM05D005835 ORTHO05D007187 2.6e-34 149.4 176 47.7
CSS0045584 Camellia sinensis var. sinensis HOM05D005835 ORTHO05D007187 5.7e-34 148.3 153 51.6
SHI20590 Sapria himalayana HOM05D005835 ORTHO05D007187 5.7e-34 148.3 179 49.2
SGA_v2.0_scaffold146G36171 Striga asiatica HOM05D005835 ORTHO05D007187 5.7e-34 148.3 181 45.3
Sc16g0006190 Simmondsia chinensis HOM05D005835 ORTHO05D007187 9.8e-34 147.5 173 43.4
TWI15G0429 Tripterygium wilfordii HOM05D005835 ORTHO05D007187 9.8e-34 147.5 114 62.3
SGA_v2.0_scaffold120G32837 Striga asiatica HOM05D005835 ORTHO05D007187 1.3e-33 147.1 176 47.7
HanXRQChr13g0394681 Helianthus annuus HOM05D005835 ORTHO05D007187 1.7e-33 146.7 173 46.8
BcaB01g01732 Brassica carinata HOM05D005835 ORTHO05D007187 2.8e-33 146.0 178 43.8
C09p34190 Brassica napus HOM05D005835 ORTHO05D007187 3.7e-33 145.6 179 46.4
BolC9t56264H Brassica oleracea HOM05D005835 ORTHO05D007187 3.7e-33 145.6 179 46.4
Hund02098 Selenicereus undatus HOM05D005835 ORTHO05D007187 6.3e-33 144.8 172 45.3
PSO478G0096 Papaver somniferum HOM05D005835 ORTHO05D007187 1.4e-32 143.7 192 47.9
Psat0s1988g0040 Pisum sativum HOM05D005835 ORTHO05D007187 2.4e-32 142.9 171 47.4
Lalb_Chr05g0225471 Lupinus albus HOM05D005835 ORTHO05D007187 4.1e-32 142.1 170 46.5
BcaC04g21221 Brassica carinata HOM05D005835 ORTHO05D007187 5.4e-32 141.7 175 45.7
HanXRQChr02g0049681 Helianthus annuus HOM05D005835 ORTHO05D007187 1.2e-31 140.6 177 46.3
TPR.G37587 Trifolium pratense HOM05D005835 ORTHO05D007187 1.2e-31 140.6 171 46.8
A09p26960 Brassica napus HOM05D005835 ORTHO05D007187 2.0e-31 139.8 179 44.7
BraA09t38266Z Brassica rapa HOM05D005835 ORTHO05D007187 2.0e-31 139.8 179 44.7
Ca_12275_v3 Cicer arietinum L. HOM05D005835 ORTHO05D007187 2.0e-31 139.8 171 46.2
Medtr4g102330 Medicago truncatula HOM05D005835 ORTHO05D007187 2.7e-31 139.4 171 46.8
CSS0008349 Camellia sinensis var. sinensis HOM05D005835 ORTHO05D007187 3.5e-31 139.0 171 46.2
Thhalv10029018m.g Eutrema salsugineum HOM05D005835 ORTHO05D007187 3.5e-31 139.0 176 46.0
Lalb_Chr16g0389651 Lupinus albus HOM05D005835 ORTHO05D007187 5.9e-31 138.3 170 44.7
CDE04G3390 Ceratophyllum demersum HOM05D005835 ORTHO05D007187 1.7e-30 136.7 179 43.0
GSVIVG01004287001 Vitis vinifera HOM05D005835 ORTHO05D007187 2.3e-30 136.3 177 44.1
GSVIVG01007420001 Vitis vinifera HOM05D005835 ORTHO05D007187 3.8e-30 135.6 179 43.0
Os05g0103500 Oryza sativa ssp. japonica HOM05D005835 ORTHO05D007187 1.5e-29 133.7 179 43.0
Phvul.003G214325 Phaseolus vulgaris HOM05D005835 ORTHO05D007187 2.5e-29 132.9 170 47.6
VMungo1215G0693 Vigna mungo HOM05D005835 ORTHO05D007187 5.5e-29 131.7 170 47.6
Glyma.05G051800 Glycine max HOM05D005835 ORTHO05D007187 7.2e-29 131.3 170 47.6
THA.LOC104813805 Tarenaya hassleriana HOM05D005835 ORTHO05D007187 7.2e-29 131.3 178 45.5
THA.LOC104806344 Tarenaya hassleriana HOM05D005835 ORTHO05D007187 1.2e-28 130.6 178 46.1
ATR0115G012 Amborella trichopoda HOM05D005835 ORTHO05D007187 6.1e-28 128.3 176 44.9
HPP92_005292 Vanilla planifolia HOM05D005835 ORTHO05D007187 1.4e-27 127.1 176 42.6
CARHR253930 Cardamine hirsuta HOM05D005835 ORTHO05D007187 1.5e-26 123.6 111 55.0
Zm00001eb356210 Zea mays HOM05D005835 ORTHO05D007187 1.5e-26 123.6 185 40.5
Lsat_1_v5_gn_6_4381 Lactuca sativa HOM05D005835 ORTHO05D007187 4.1e-24 115.5 172 39.5
Actinidia05173 Actinidia chinensis HOM05D005835 ORTHO05D000538 5.2e-19 98.6 113 50.4
SEGI_03973 Sequoiadendron giganteum HOM05D005835 ORTHO05D007187 8.6e-14 81.3 177 36.2
Mapoly0001s0295 Marchantia polymorpha HOM05D005835 ORTHO05D007187 3.6e-12 75.9 183 30.1
Pp3c8_11610 Physcomitrium patens HOM05D005835 ORTHO05D007187 2.6e-10 69.7 179 31.8
Pp3c15_5650 Physcomitrium patens HOM05D005835 ORTHO05D007187 1.3e-09 67.4 180 31.7


User provided reference genes

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